RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 CASZ1Q86V15 1759 aa14.84□□□□□ -0.03
VPS11-202ENST00000526829 TNS2Q63HR2 1409 aa14.84□□□□□ -0.03
VPS11-202ENST00000526829 VSIG10Q8N0Z9 540 aa14.84□□□□□ -0.03
VPS11-202ENST00000526829 PUS7Q96PZ0 661 aaKnown RBP14.84□□□□□ -0.03
VPS11-202ENST00000526829 NME9Q86XW9 330 aa14.83□□□□□ -0.04
VPS11-202ENST00000526829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.83□□□□□ -0.04
VPS11-202ENST00000526829 SPON1Q9HCB6 807 aa14.83□□□□□ -0.04
VPS11-202ENST00000526829 TONSLQ96HA7 1378 aa14.83□□□□□ -0.04
VPS11-202ENST00000526829 EDC4Q6P2E9 1401 aaKnown RBP14.83□□□□□ -0.04
VPS11-202ENST00000526829 EXOC5O00471 708 aa14.82□□□□□ -0.04
VPS11-202ENST00000526829 KCNQ2O43526 872 aa14.82□□□□□ -0.04
VPS11-202ENST00000526829 PROM2Q8N271 834 aa14.82□□□□□ -0.04
VPS11-202ENST00000526829 TMC1Q8TDI8 760 aa14.82□□□□□ -0.04
VPS11-202ENST00000526829 ERBB3P21860 1342 aa14.82□□□□□ -0.04
VPS11-202ENST00000526829 NHSQ6T4R5 1651 aa14.82□□□□□ -0.04
VPS11-202ENST00000526829 HDGFL2Q7Z4V5 671 aaPredicted RBP14.82□□□□□ -0.04
VPS11-202ENST00000526829 SLC12A5Q9H2X9 1139 aa14.81□□□□□ -0.04
VPS11-202ENST00000526829 A0A1W2PP64 1363 aa14.8□□□□□ -0.04
VPS11-202ENST00000526829 TMEM132AQ24JP5 1023 aa14.8□□□□□ -0.04
VPS11-202ENST00000526829 TERF2IPQ9NYB0 399 aa14.79□□□□□ -0.04
VPS11-202ENST00000526829 NINLQ9Y2I6 1382 aa14.79□□□□□ -0.04
VPS11-202ENST00000526829 TXNRD1Q16881 649 aa14.78□□□□□ -0.04
VPS11-202ENST00000526829 TESK2Q96S53 571 aa14.78□□□□□ -0.04
VPS11-202ENST00000526829 NLRP2Q9NX02 1062 aa14.78□□□□□ -0.04
VPS11-202ENST00000526829 DDX10Q13206 875 aaKnown RBP14.77□□□□□ -0.04
VPS11-202ENST00000526829 ANKRD24Q8TF21 1146 aa14.77□□□□□ -0.04
VPS11-202ENST00000526829 FAM208AQ9UK61 1670 aaKnown RBP14.77□□□□□ -0.05
VPS11-202ENST00000526829 IL2RBP14784 551 aa14.76□□□□□ -0.05
VPS11-202ENST00000526829 PPP1R1BQ9UD71 204 aaPredicted RBP14.76□□□□□ -0.05
VPS11-202ENST00000526829 PDGFDQ9GZP0 370 aaPredicted RBP14.76□□□□□ -0.05
VPS11-202ENST00000526829 PAPPAQ13219 1627 aa14.75□□□□□ -0.05
VPS11-202ENST00000526829 BTAF1O14981 1849 aa14.75□□□□□ -0.05
VPS11-202ENST00000526829 STK32BQ9NY57 414 aa14.74□□□□□ -0.05
VPS11-202ENST00000526829 SLC15A2Q16348 729 aa14.74□□□□□ -0.05
VPS11-202ENST00000526829 IP6K1Q92551 441 aa14.74□□□□□ -0.05
VPS11-202ENST00000526829 MYOM1P52179 1685 aa14.73□□□□□ -0.05
VPS11-202ENST00000526829 ANP32CO43423 234 aa14.73□□□□□ -0.05
VPS11-202ENST00000526829 ST20-MTHFSA0A0A6YYL1 179 aa14.73□□□□□ -0.05
VPS11-202ENST00000526829 PTGER2P43116 358 aa14.73□□□□□ -0.05
VPS11-202ENST00000526829 ACSBG1Q96GR2 724 aa14.73□□□□□ -0.05
VPS11-202ENST00000526829 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
VPS11-202ENST00000526829 ZBTB7AO95365 584 aa14.71□□□□□ -0.05
VPS11-202ENST00000526829 NAP1L2Q9ULW6 460 aaPredicted RBP14.71□□□□□ -0.06
VPS11-202ENST00000526829 ANKRD36BQ8N2N9 1353 aa14.7□□□□□ -0.06
VPS11-202ENST00000526829 COG3Q96JB2 828 aa14.69□□□□□ -0.06
VPS11-202ENST00000526829 MAP3K19Q56UN5 1328 aa14.69□□□□□ -0.06
VPS11-202ENST00000526829 YY1P25490 414 aa14.69□□□□□ -0.06
VPS11-202ENST00000526829 SGIP1Q9BQI5 828 aa14.69□□□□□ -0.06
VPS11-202ENST00000526829 SHANK3Q9BYB0 1731 aa14.68□□□□□ -0.06
VPS11-202ENST00000526829 RGPD2P0DJD1 1756 aa14.68□□□□□ -0.06
VPS11-202ENST00000526829 KAT6BQ8WYB5 2073 aa14.68□□□□□ -0.06
VPS11-202ENST00000526829 HOXC9P31274 260 aa14.68□□□□□ -0.06
VPS11-202ENST00000526829 MTFR1LQ9H019 292 aa14.68□□□□□ -0.06
VPS11-202ENST00000526829 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
VPS11-202ENST00000526829 QSER1Q2KHR3 1735 aa14.67□□□□□ -0.06
VPS11-202ENST00000526829 RTL1A6NKG5 1358 aa14.67□□□□□ -0.06
VPS11-202ENST00000526829 LTV1Q96GA3 475 aaPredicted RBP14.67□□□□□ -0.06
VPS11-202ENST00000526829 LRRC4BQ9NT99 713 aa14.66□□□□□ -0.06
VPS11-202ENST00000526829 FBLN1P23142 703 aa14.65□□□□□ -0.06
VPS11-202ENST00000526829 TMF1P82094 1093 aa14.65□□□□□ -0.06
VPS11-202ENST00000526829 ZNF827Q17R98 1081 aa14.65□□□□□ -0.06
VPS11-202ENST00000526829 DOT1LQ8TEK3 1739 aa14.65□□□□□ -0.06
VPS11-202ENST00000526829 MEGF6O75095 1541 aa14.65□□□□□ -0.06
VPS11-202ENST00000526829 USP47Q96K76 1375 aa14.65□□□□□ -0.06
VPS11-202ENST00000526829 AMPHP49418 695 aa14.65□□□□□ -0.06
VPS11-202ENST00000526829 CDCA8Q53HL2 280 aa14.65□□□□□ -0.06
VPS11-202ENST00000526829 DDX54Q8TDD1 881 aaKnown RBP14.65□□□□□ -0.06
VPS11-202ENST00000526829 LY75O60449 1722 aa14.64□□□□□ -0.07
VPS11-202ENST00000526829 COL24A1Q17RW2 1714 aa14.64□□□□□ -0.07
VPS11-202ENST00000526829 FYB1O15117 783 aa14.64□□□□□ -0.07
VPS11-202ENST00000526829 SLC27A3Q5K4L6 730 aa14.64□□□□□ -0.07
VPS11-202ENST00000526829 IL27Q8NEV9 243 aa14.64□□□□□ -0.07
VPS11-202ENST00000526829 NSD2O96028 1365 aa14.64□□□□□ -0.07
VPS11-202ENST00000526829 AKT1S1Q96B36 256 aa14.64□□□□□ -0.07
VPS11-202ENST00000526829 SYT17Q9BSW7 474 aa14.64□□□□□ -0.07
VPS11-202ENST00000526829 KIF20BQ96Q89 1820 aa14.63□□□□□ -0.07
VPS11-202ENST00000526829 IPO4Q8TEX9 1081 aaKnown RBP14.63□□□□□ -0.07
VPS11-202ENST00000526829 FHDC1Q9C0D6 1143 aaPredicted RBP14.63□□□□□ -0.07
VPS11-202ENST00000526829 MAP3K5Q99683 1374 aa14.62□□□□□ -0.07
VPS11-202ENST00000526829 ZCRB1Q8TBF4 217 aaKnown RBP14.62□□□□□ -0.07
VPS11-202ENST00000526829 TUBGCP6Q96RT7 1819 aa14.62□□□□□ -0.07
VPS11-202ENST00000526829 PRIM1P49642 420 aaKnown RBP14.61□□□□□ -0.07
VPS11-202ENST00000526829 RRS1Q15050 365 aaKnown RBP14.61□□□□□ -0.07
VPS11-202ENST00000526829 NBPF6Q5VWK0 638 aa14.61□□□□□ -0.07
VPS11-202ENST00000526829 NBPF4Q96M43 638 aa14.61□□□□□ -0.07
VPS11-202ENST00000526829 GGNBP2Q9H3C7 697 aa14.61□□□□□ -0.07
VPS11-202ENST00000526829 PPP4R2Q9NY27 417 aa14.61□□□□□ -0.07
VPS11-202ENST00000526829 CGNL1Q0VF96 1302 aa14.6□□□□□ -0.07
VPS11-202ENST00000526829 SLC16A10Q8TF71 515 aa14.6□□□□□ -0.07
VPS11-202ENST00000526829 KIF24Q5T7B8 1368 aa14.6□□□□□ -0.07
VPS11-202ENST00000526829 INSRP06213 1382 aa14.59□□□□□ -0.07
VPS11-202ENST00000526829 SMG6Q86US8 1419 aaKnown RBP14.59□□□□□ -0.07
VPS11-202ENST00000526829 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.59□□□□□ -0.07
VPS11-202ENST00000526829 PNPLA7Q6ZV29 1317 aa14.59□□□□□ -0.07
VPS11-202ENST00000526829 SYTL4Q96C24 671 aaPredicted RBP14.58□□□□□ -0.07
VPS11-202ENST00000526829 FLT4P35916 1363 aa14.58□□□□□ -0.08
VPS11-202ENST00000526829 CHD4Q14839 1912 aa14.57□□□□□ -0.08
VPS11-202ENST00000526829 HSP90AB2PQ58FF8 381 aa14.56□□□□□ -0.08
VPS11-202ENST00000526829 USHBP1Q8N6Y0 703 aa14.56□□□□□ -0.08
VPS11-202ENST00000526829 ANKRD26Q9UPS8 1709 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms