RNA–Protein interactions for RNA: ENST00000525982.5

CPNE7-203, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-203ENST00000525982 SHANK3Q9BYB0 1731 aa29.38■■■□□ 2.29
CPNE7-203ENST00000525982 FYB1O15117 783 aa29.38■■■□□ 2.29
CPNE7-203ENST00000525982 PTGER2P43116 358 aa29.37■■■□□ 2.29
CPNE7-203ENST00000525982 DDX54Q8TDD1 881 aaKnown RBP29.37■■■□□ 2.29
CPNE7-203ENST00000525982 DOT1LQ8TEK3 1739 aa29.37■■■□□ 2.29
CPNE7-203ENST00000525982 MTFR1LQ9H019 292 aa29.36■■■□□ 2.29
CPNE7-203ENST00000525982 PER1O15534 1290 aaPredicted RBP29.35■■■□□ 2.29
CPNE7-203ENST00000525982 FBLN1P23142 703 aa29.35■■■□□ 2.29
CPNE7-203ENST00000525982 SMG6Q86US8 1419 aaKnown RBP29.35■■■□□ 2.29
CPNE7-203ENST00000525982 QSER1Q2KHR3 1735 aa29.34■■■□□ 2.29
CPNE7-203ENST00000525982 GGNBP2Q9H3C7 697 aa29.34■■■□□ 2.29
CPNE7-203ENST00000525982 ATF5Q9Y2D1 282 aaPredicted RBP29.33■■■□□ 2.29
CPNE7-203ENST00000525982 MEGF6O75095 1541 aa29.33■■■□□ 2.29
CPNE7-203ENST00000525982 KIF24Q5T7B8 1368 aa29.32■■■□□ 2.28
CPNE7-203ENST00000525982 NPC1L1Q9UHC9 1359 aa29.32■■■□□ 2.28
CPNE7-203ENST00000525982 RRS1Q15050 365 aaKnown RBP29.32■■■□□ 2.28
CPNE7-203ENST00000525982 SLC27A3Q5K4L6 730 aa29.32■■■□□ 2.28
CPNE7-203ENST00000525982 ZCRB1Q8TBF4 217 aaKnown RBP29.32■■■□□ 2.28
CPNE7-203ENST00000525982 LY75O60449 1722 aa29.31■■■□□ 2.28
CPNE7-203ENST00000525982 YY1P25490 414 aa29.29■■■□□ 2.28
CPNE7-203ENST00000525982 LRRC4BQ9NT99 713 aa29.29■■■□□ 2.28
CPNE7-203ENST00000525982 INSRP06213 1382 aa29.28■■■□□ 2.28
CPNE7-203ENST00000525982 SGIP1Q9BQI5 828 aa29.28■■■□□ 2.28
CPNE7-203ENST00000525982 FLT4P35916 1363 aa29.27■■■□□ 2.28
CPNE7-203ENST00000525982 NBPF6Q5VWK0 638 aa29.27■■■□□ 2.28
CPNE7-203ENST00000525982 NBPF4Q96M43 638 aa29.27■■■□□ 2.28
CPNE7-203ENST00000525982 ZNF827Q17R98 1081 aa29.26■■■□□ 2.27
CPNE7-203ENST00000525982 AMER1Q5JTC6 1135 aaPredicted RBP29.26■■■□□ 2.27
CPNE7-203ENST00000525982 SYTL4Q96C24 671 aaPredicted RBP29.26■■■□□ 2.27
CPNE7-203ENST00000525982 ANKRD26Q9UPS8 1709 aa29.25■■■□□ 2.27
CPNE7-203ENST00000525982 PRIM1P49642 420 aaKnown RBP29.25■■■□□ 2.27
CPNE7-203ENST00000525982 RAPGEF4Q8WZA2 1011 aa29.25■■■□□ 2.27
CPNE7-203ENST00000525982 AKT1S1Q96B36 256 aa29.24■■■□□ 2.27
CPNE7-203ENST00000525982 DDX10Q13206 875 aaKnown RBP29.23■■■□□ 2.27
CPNE7-203ENST00000525982 SLC16A10Q8TF71 515 aa29.22■■■□□ 2.27
CPNE7-203ENST00000525982 SYT17Q9BSW7 474 aa29.22■■■□□ 2.27
CPNE7-203ENST00000525982 FHDC1Q9C0D6 1143 aaPredicted RBP29.22■■■□□ 2.27
CPNE7-203ENST00000525982 TUBGCP6Q96RT7 1819 aa29.22■■■□□ 2.27
CPNE7-203ENST00000525982 COL24A1Q17RW2 1714 aa29.21■■■□□ 2.27
CPNE7-203ENST00000525982 HSP90AB2PQ58FF8 381 aa29.21■■■□□ 2.27
CPNE7-203ENST00000525982 TATP17735 454 aaPredicted RBP29.2■■■□□ 2.26
CPNE7-203ENST00000525982 USHBP1Q8N6Y0 703 aa29.2■■■□□ 2.26
CPNE7-203ENST00000525982 MAP3K5Q99683 1374 aa29.2■■■□□ 2.26
CPNE7-203ENST00000525982 MORC1Q86VD1 984 aa29.19■■■□□ 2.26
CPNE7-203ENST00000525982 ARXQ96QS3 562 aa29.19■■■□□ 2.26
CPNE7-203ENST00000525982 PCDH11XQ9BZA7 1347 aa29.18■■■□□ 2.26
CPNE7-203ENST00000525982 PCDH11YQ9BZA8 1340 aa29.18■■■□□ 2.26
CPNE7-203ENST00000525982 PKD1L3Q7Z443 1732 aa29.16■■■□□ 2.26
CPNE7-203ENST00000525982 TFCP2L1Q9NZI6 479 aa29.15■■■□□ 2.26
CPNE7-203ENST00000525982 PNPLA7Q6ZV29 1317 aa29.15■■■□□ 2.26
CPNE7-203ENST00000525982 MAP2P11137 1827 aaKnown RBP29.15■■■□□ 2.26
CPNE7-203ENST00000525982 CCNL1Q9UK58 526 aaPredicted RBP29.13■■■□□ 2.25
CPNE7-203ENST00000525982 NCAPD2Q15021 1401 aa29.12■■■□□ 2.25
CPNE7-203ENST00000525982 CHD4Q14839 1912 aa29.12■■■□□ 2.25
CPNE7-203ENST00000525982 HMGB2P26583 209 aaKnown RBP29.12■■■□□ 2.25
CPNE7-203ENST00000525982 EMILIN1Q9Y6C2 1016 aa29.12■■■□□ 2.25
CPNE7-203ENST00000525982 POLD1P28340 1107 aa29.11■■■□□ 2.25
CPNE7-203ENST00000525982 KCNQ4P56696 695 aa29.11■■■□□ 2.25
CPNE7-203ENST00000525982 C5P01031 1676 aa29.11■■■□□ 2.25
CPNE7-203ENST00000525982 CC2D1BQ5T0F9 858 aaKnown RBP29.1■■■□□ 2.25
CPNE7-203ENST00000525982 ITGB4P16144 1822 aa29.1■■■□□ 2.25
CPNE7-203ENST00000525982 TOGARAM1Q9Y4F4 1720 aa29.08■■■□□ 2.25
CPNE7-203ENST00000525982 TAF1LQ8IZX4 1826 aa29.08■■■□□ 2.25
CPNE7-203ENST00000525982 UTRNP46939 3433 aa29.06■■■□□ 2.24
CPNE7-203ENST00000525982 CYP27B1O15528 508 aa29.06■■■□□ 2.24
CPNE7-203ENST00000525982 PPM1GO15355 546 aaPredicted RBP29.05■■■□□ 2.24
CPNE7-203ENST00000525982 RALBP1Q15311 655 aa29.05■■■□□ 2.24
CPNE7-203ENST00000525982 PALLDQ8WX93 1383 aa29.03■■■□□ 2.24
CPNE7-203ENST00000525982 POLKQ9UBT6 870 aa29.03■■■□□ 2.24
CPNE7-203ENST00000525982 SPG7Q9UQ90 795 aa29.02■■■□□ 2.24
CPNE7-203ENST00000525982 TNNT2P45379 298 aaPredicted RBP29.01■■■□□ 2.23
CPNE7-203ENST00000525982 MPRIPQ6WCQ1 1025 aa29.01■■■□□ 2.23
CPNE7-203ENST00000525982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.01■■■□□ 2.23
CPNE7-203ENST00000525982 NKX1-1Q15270 411 aaPredicted RBP29■■■□□ 2.23
CPNE7-203ENST00000525982 SMARCC1Q92922 1105 aaPredicted RBP29■■■□□ 2.23
CPNE7-203ENST00000525982 PLEKHG2Q9H7P9 1386 aa29■■■□□ 2.23
CPNE7-203ENST00000525982 COL23A1Q86Y22 540 aaPredicted RBP28.98■■■□□ 2.23
CPNE7-203ENST00000525982 FLAD1Q8NFF5 587 aa28.98■■■□□ 2.23
CPNE7-203ENST00000525982 EYA1Q99502 592 aa28.98■■■□□ 2.23
CPNE7-203ENST00000525982 C4BP0C0L5 1744 aa28.97■■■□□ 2.23
CPNE7-203ENST00000525982 MSH5O43196 834 aa28.96■■■□□ 2.23
CPNE7-203ENST00000525982 KLHL34Q8N239 644 aa28.96■■■□□ 2.23
CPNE7-203ENST00000525982 GPR162Q16538 588 aa28.94■■■□□ 2.22
CPNE7-203ENST00000525982 ZNF784Q8NCA9 323 aaPredicted RBP28.93■■■□□ 2.22
CPNE7-203ENST00000525982 UBR3Q6ZT12 1888 aa28.93■■■□□ 2.22
CPNE7-203ENST00000525982 MTHFSP49914 203 aa28.92■■■□□ 2.22
CPNE7-203ENST00000525982 PIGBQ92521 554 aa28.92■■■□□ 2.22
CPNE7-203ENST00000525982 PPP2R1AP30153 589 aa28.91■■■□□ 2.22
CPNE7-203ENST00000525982 CNGB1Q14028 1251 aaPredicted RBP28.9■■■□□ 2.22
CPNE7-203ENST00000525982 EIF4A2Q14240 407 aaKnown RBP28.9■■■□□ 2.22
CPNE7-203ENST00000525982 IFNL2Q8IZJ0 200 aa28.9■■■□□ 2.22
CPNE7-203ENST00000525982 PRKRIP1Q9H875 184 aaPredicted RBP28.9■■■□□ 2.22
CPNE7-203ENST00000525982 CFAP53Q96M91 514 aa28.89■■■□□ 2.22
CPNE7-203ENST00000525982 TMOD3Q9NYL9 352 aa28.89■■■□□ 2.22
CPNE7-203ENST00000525982 PHKG2P15735 406 aa28.88■■■□□ 2.21
CPNE7-203ENST00000525982 AK7Q96M32 723 aa28.88■■■□□ 2.21
CPNE7-203ENST00000525982 ANP32CO43423 234 aa28.87■■■□□ 2.21
CPNE7-203ENST00000525982 NLGN2Q8NFZ4 835 aa28.87■■■□□ 2.21
CPNE7-203ENST00000525982 GOLGB1Q14789 3259 aaKnown RBP28.87■■■□□ 2.21
CPNE7-203ENST00000525982 IGSF1Q8N6C5 1336 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms