RNA–Protein interactions for RNA: ENST00000525874.1

SYVN1-205, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-205ENST00000525874 SHANK3Q9BYB0 1731 aa15.63■□□□□ 0.09
SYVN1-205ENST00000525874 HOXC9P31274 260 aa15.63■□□□□ 0.09
SYVN1-205ENST00000525874 KLHL34Q8N239 644 aa15.63■□□□□ 0.09
SYVN1-205ENST00000525874 TFCP2L1Q9NZI6 479 aa15.63■□□□□ 0.09
SYVN1-205ENST00000525874 NSD2O96028 1365 aa15.62■□□□□ 0.09
SYVN1-205ENST00000525874 TONSLQ96HA7 1378 aa15.62■□□□□ 0.09
SYVN1-205ENST00000525874 FBLN1P23142 703 aa15.62■□□□□ 0.09
SYVN1-205ENST00000525874 AMPHP49418 695 aa15.62■□□□□ 0.09
SYVN1-205ENST00000525874 ZCRB1Q8TBF4 217 aaKnown RBP15.62■□□□□ 0.09
SYVN1-205ENST00000525874 TESK2Q96S53 571 aa15.62■□□□□ 0.09
SYVN1-205ENST00000525874 C1QTNF8P60827 252 aa15.61■□□□□ 0.09
SYVN1-205ENST00000525874 MEGF6O75095 1541 aa15.61■□□□□ 0.09
SYVN1-205ENST00000525874 SENP3-EIF4A1A0A087X0R7 540 aa15.6■□□□□ 0.09
SYVN1-205ENST00000525874 ST20-MTHFSA0A0A6YYL1 179 aa15.59■□□□□ 0.09
SYVN1-205ENST00000525874 PELP1Q8IZL8 1130 aaKnown RBP15.59■□□□□ 0.09
SYVN1-205ENST00000525874 CCNL1Q9UK58 526 aaPredicted RBP15.59■□□□□ 0.09
SYVN1-205ENST00000525874 GOLGB1Q14789 3259 aaKnown RBP15.58■□□□□ 0.08
SYVN1-205ENST00000525874 NLGN2Q8NFZ4 835 aa15.58■□□□□ 0.08
SYVN1-205ENST00000525874 RTL1A6NKG5 1358 aa15.58■□□□□ 0.08
SYVN1-205ENST00000525874 SLC24A1O60721 1099 aa15.57■□□□□ 0.08
SYVN1-205ENST00000525874 RRS1Q15050 365 aaKnown RBP15.57■□□□□ 0.08
SYVN1-205ENST00000525874 NBPF6Q5VWK0 638 aa15.57■□□□□ 0.08
SYVN1-205ENST00000525874 NBPF4Q96M43 638 aa15.57■□□□□ 0.08
SYVN1-205ENST00000525874 CGNL1Q0VF96 1302 aa15.56■□□□□ 0.08
SYVN1-205ENST00000525874 USP47Q96K76 1375 aa15.56■□□□□ 0.08
SYVN1-205ENST00000525874 COL23A1Q86Y22 540 aaPredicted RBP15.55■□□□□ 0.08
SYVN1-205ENST00000525874 USHBP1Q8N6Y0 703 aa15.55■□□□□ 0.08
SYVN1-205ENST00000525874 FYB1O15117 783 aa15.54■□□□□ 0.08
SYVN1-205ENST00000525874 MSH5O43196 834 aa15.54■□□□□ 0.08
SYVN1-205ENST00000525874 GIGYF1O75420 1035 aaPredicted RBP15.54■□□□□ 0.08
SYVN1-205ENST00000525874 RAPGEF4Q8WZA2 1011 aa15.54■□□□□ 0.08
SYVN1-205ENST00000525874 GGNBP2Q9H3C7 697 aa15.54■□□□□ 0.08
SYVN1-205ENST00000525874 SMG6Q86US8 1419 aaKnown RBP15.53■□□□□ 0.08
SYVN1-205ENST00000525874 YBX3P16989 372 aaKnown RBP eCLIP15.53■□□□□ 0.08
SYVN1-205ENST00000525874 C5P01031 1676 aa15.53■□□□□ 0.08
SYVN1-205ENST00000525874 GRIN3BO60391 1043 aa15.52■□□□□ 0.08
SYVN1-205ENST00000525874 TATP17735 454 aaPredicted RBP15.52■□□□□ 0.08
SYVN1-205ENST00000525874 PCDH11XQ9BZA7 1347 aa15.51■□□□□ 0.07
SYVN1-205ENST00000525874 PCDH11YQ9BZA8 1340 aa15.51■□□□□ 0.07
SYVN1-205ENST00000525874 HSP90AB2PQ58FF8 381 aa15.51■□□□□ 0.07
SYVN1-205ENST00000525874 MSL1Q68DK7 614 aa15.51■□□□□ 0.07
SYVN1-205ENST00000525874 TAF1LQ8IZX4 1826 aa15.51■□□□□ 0.07
SYVN1-205ENST00000525874 INSRP06213 1382 aa15.5■□□□□ 0.07
SYVN1-205ENST00000525874 KIF20BQ96Q89 1820 aa15.5■□□□□ 0.07
SYVN1-205ENST00000525874 PALLDQ8WX93 1383 aa15.49■□□□□ 0.07
SYVN1-205ENST00000525874 HMGB2P26583 209 aaKnown RBP15.49■□□□□ 0.07
SYVN1-205ENST00000525874 TMF1P82094 1093 aa15.49■□□□□ 0.07
SYVN1-205ENST00000525874 FLT4P35916 1363 aa15.49■□□□□ 0.07
SYVN1-205ENST00000525874 ITGB4P16144 1822 aa15.48■□□□□ 0.07
SYVN1-205ENST00000525874 MPRIPQ6WCQ1 1025 aa15.48■□□□□ 0.07
SYVN1-205ENST00000525874 FLAD1Q8NFF5 587 aa15.48■□□□□ 0.07
SYVN1-205ENST00000525874 CD2APQ9Y5K6 639 aa15.48■□□□□ 0.07
SYVN1-205ENST00000525874 KIF24Q5T7B8 1368 aa15.48■□□□□ 0.07
SYVN1-205ENST00000525874 CYP27B1O15528 508 aa15.47■□□□□ 0.07
SYVN1-205ENST00000525874 TOGARAM1Q9Y4F4 1720 aa15.47■□□□□ 0.07
SYVN1-205ENST00000525874 C4BP0C0L5 1744 aa15.46■□□□□ 0.07
SYVN1-205ENST00000525874 PKD1L3Q7Z443 1732 aa15.46■□□□□ 0.06
SYVN1-205ENST00000525874 SMARCC1Q92922 1105 aaPredicted RBP15.45■□□□□ 0.06
SYVN1-205ENST00000525874 ATP10DQ9P241 1426 aa15.44■□□□□ 0.06
SYVN1-205ENST00000525874 UBR3Q6ZT12 1888 aa15.44■□□□□ 0.06
SYVN1-205ENST00000525874 CDCA8Q53HL2 280 aa15.44■□□□□ 0.06
SYVN1-205ENST00000525874 AK7Q96M32 723 aa15.44■□□□□ 0.06
SYVN1-205ENST00000525874 EMILIN1Q9Y6C2 1016 aa15.44■□□□□ 0.06
SYVN1-205ENST00000525874 AMIGO3Q86WK7 504 aa15.43■□□□□ 0.06
SYVN1-205ENST00000525874 PIGBQ92521 554 aa15.43■□□□□ 0.06
SYVN1-205ENST00000525874 NKX1-1Q15270 411 aaPredicted RBP15.42■□□□□ 0.06
SYVN1-205ENST00000525874 CARD14Q9BXL6 1004 aa15.42■□□□□ 0.06
SYVN1-205ENST00000525874 MAP2P11137 1827 aaKnown RBP15.42■□□□□ 0.06
SYVN1-205ENST00000525874 NCAPD2Q15021 1401 aa15.42■□□□□ 0.06
SYVN1-205ENST00000525874 PHF14O94880 888 aa15.41■□□□□ 0.06
SYVN1-205ENST00000525874 NSD3Q9BZ95 1437 aa15.41■□□□□ 0.06
SYVN1-205ENST00000525874 CEP350Q5VT06 3117 aa15.41■□□□□ 0.06
SYVN1-205ENST00000525874 ANKRD26Q9UPS8 1709 aa15.4■□□□□ 0.06
SYVN1-205ENST00000525874 ADCY9O60503 1353 aa15.4■□□□□ 0.06
SYVN1-205ENST00000525874 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.4■□□□□ 0.06
SYVN1-205ENST00000525874 TRIM26Q12899 539 aaPredicted RBP15.4■□□□□ 0.06
SYVN1-205ENST00000525874 SMIM5Q71RC9 77 aa15.4■□□□□ 0.06
SYVN1-205ENST00000525874 GPBP1L1Q9HC44 474 aaPredicted RBP15.4■□□□□ 0.06
SYVN1-205ENST00000525874 SPG7Q9UQ90 795 aa15.4■□□□□ 0.06
SYVN1-205ENST00000525874 LOC102724428A0A0B4J2F2 783 aa15.39■□□□□ 0.05
SYVN1-205ENST00000525874 PPM1GO15355 546 aaPredicted RBP15.39■□□□□ 0.05
SYVN1-205ENST00000525874 SSFA2P28290 1259 aa15.39■□□□□ 0.05
SYVN1-205ENST00000525874 SIK1P57059 783 aa15.39■□□□□ 0.05
SYVN1-205ENST00000525874 LINC00116Q8NCU8 138 aa15.39■□□□□ 0.05
SYVN1-205ENST00000525874 IGSF1Q8N6C5 1336 aa15.39■□□□□ 0.05
SYVN1-205ENST00000525874 WASHC2AQ641Q2 1341 aa15.38■□□□□ 0.05
SYVN1-205ENST00000525874 EYA1Q99502 592 aa15.37■□□□□ 0.05
SYVN1-205ENST00000525874 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.37■□□□□ 0.05
SYVN1-205ENST00000525874 TMOD3Q9NYL9 352 aa15.37■□□□□ 0.05
SYVN1-205ENST00000525874 WWC3Q9ULE0 1092 aa15.37■□□□□ 0.05
SYVN1-205ENST00000525874 ITPK1Q13572 414 aa15.36■□□□□ 0.05
SYVN1-205ENST00000525874 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
SYVN1-205ENST00000525874 GNPATO15228 680 aa15.35■□□□□ 0.05
SYVN1-205ENST00000525874 ATP6V1AP38606 617 aa15.35■□□□□ 0.05
SYVN1-205ENST00000525874 ZNF526Q8TF50 670 aaPredicted RBP15.35■□□□□ 0.05
SYVN1-205ENST00000525874 PHKG2P15735 406 aa15.34■□□□□ 0.05
SYVN1-205ENST00000525874 IFFO2Q5TF58 517 aa15.34■□□□□ 0.05
SYVN1-205ENST00000525874 IFNL2Q8IZJ0 200 aa15.34■□□□□ 0.05
SYVN1-205ENST00000525874 PCGF6Q9BYE7 350 aa15.33■□□□□ 0.04
SYVN1-205ENST00000525874 POLKQ9UBT6 870 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms