RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 PRICKLE2Q7Z3G6 844 aa5.97□□□□□ -1.45
ECHDC1-218ENST00000525745 VWA5B2Q8N398 1253 aa5.97□□□□□ -1.45
ECHDC1-218ENST00000525745 COL25A1Q9BXS0 654 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-218ENST00000525745 ESF1Q9H501 851 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-218ENST00000525745 PCDHB11Q9Y5F2 797 aa5.97□□□□□ -1.45
ECHDC1-218ENST00000525745 SENP3-EIF4A1A0A087X0R7 540 aa5.96□□□□□ -1.46
ECHDC1-218ENST00000525745 RHOQP17081 205 aa5.96□□□□□ -1.46
ECHDC1-218ENST00000525745 SCTRP47872 440 aa5.96□□□□□ -1.46
ECHDC1-218ENST00000525745 ERVK-9P63128 1117 aa5.96□□□□□ -1.46
ECHDC1-218ENST00000525745 CCDC125Q86Z20 511 aa5.96□□□□□ -1.46
ECHDC1-218ENST00000525745 NANOS1Q8WY41 292 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-218ENST00000525745 TBC1D2BQ9UPU7 963 aa5.96□□□□□ -1.46
ECHDC1-218ENST00000525745 A0A1W2PRU2 124 aa5.95□□□□□ -1.46
ECHDC1-218ENST00000525745 RNF144AP50876 292 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-218ENST00000525745 SV2AQ7L0J3 742 aa5.95□□□□□ -1.46
ECHDC1-218ENST00000525745 CYP2U1Q7Z449 544 aa5.95□□□□□ -1.46
ECHDC1-218ENST00000525745 NLRP3Q96P20 1036 aa5.95□□□□□ -1.46
ECHDC1-218ENST00000525745 PRM3Q9NNZ6 103 aa5.95□□□□□ -1.46
ECHDC1-218ENST00000525745 SLC27A3Q5K4L6 730 aa5.94□□□□□ -1.46
ECHDC1-218ENST00000525745 RNFT1Q5M7Z0 435 aa5.94□□□□□ -1.46
ECHDC1-218ENST00000525745 ARHGEF10LQ9HCE6 1279 aa5.94□□□□□ -1.46
ECHDC1-218ENST00000525745 RAB6BQ9NRW1 208 aa5.93□□□□□ -1.46
ECHDC1-218ENST00000525745 PRKCSHP14314 528 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-218ENST00000525745 GPC1P35052 558 aa5.92□□□□□ -1.46
ECHDC1-218ENST00000525745 RIPOR1Q6ZS17 1223 aa5.92□□□□□ -1.46
ECHDC1-218ENST00000525745 OSBPL3Q9H4L5 887 aa5.92□□□□□ -1.46
ECHDC1-218ENST00000525745 CUEDC1Q9NWM3 386 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-218ENST00000525745 CEP126Q9P2H0 1117 aa5.92□□□□□ -1.46
ECHDC1-218ENST00000525745 TRAK2O60296 914 aa5.91□□□□□ -1.46
ECHDC1-218ENST00000525745 MYCP01106 439 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-218ENST00000525745 EIF4G2P78344 907 aaKnown RBP eCLIP5.91□□□□□ -1.46
ECHDC1-218ENST00000525745 POU4F2Q12837 409 aa5.91□□□□□ -1.46
ECHDC1-218ENST00000525745 CLN3Q13286 438 aa5.91□□□□□ -1.46
ECHDC1-218ENST00000525745 SVOPQ8N4V2 548 aa5.91□□□□□ -1.46
ECHDC1-218ENST00000525745 CCDC85AQ96PX6 553 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-218ENST00000525745 GAS2L1Q99501 681 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-218ENST00000525745 CDCA7Q9BWT1 371 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-218ENST00000525745 ABL2P42684 1182 aa5.9□□□□□ -1.46
ECHDC1-218ENST00000525745 VAC14Q08AM6 782 aa5.9□□□□□ -1.46
ECHDC1-218ENST00000525745 IRF5Q13568 498 aa5.9□□□□□ -1.46
ECHDC1-218ENST00000525745 GDPD2Q9HCC8 539 aa5.9□□□□□ -1.46
ECHDC1-218ENST00000525745 GPR25O00155 361 aa5.89□□□□□ -1.47
ECHDC1-218ENST00000525745 SLFNL1Q499Z3 407 aa5.89□□□□□ -1.47
ECHDC1-218ENST00000525745 CNKSR1Q969H4 720 aa5.89□□□□□ -1.47
ECHDC1-218ENST00000525745 ZNF837Q96EG3 531 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-218ENST00000525745 GRIP2Q9C0E4 1043 aa5.89□□□□□ -1.47
ECHDC1-218ENST00000525745 DOLKQ9UPQ8 538 aa5.89□□□□□ -1.47
ECHDC1-218ENST00000525745 ADAMTS2O95450 1211 aa5.88□□□□□ -1.47
ECHDC1-218ENST00000525745 GNRH1P01148 92 aa5.88□□□□□ -1.47
ECHDC1-218ENST00000525745 TSGA10IPQ3SY00 556 aa5.88□□□□□ -1.47
ECHDC1-218ENST00000525745 OXLD1Q5BKU9 147 aa5.88□□□□□ -1.47
ECHDC1-218ENST00000525745 ZNF385CQ66K41 422 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-218ENST00000525745 NBPF10Q6P3W6 841 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-218ENST00000525745 TAS1R3Q7RTX0 852 aa5.88□□□□□ -1.47
ECHDC1-218ENST00000525745 RNF135Q8IUD6 432 aa5.88□□□□□ -1.47
ECHDC1-218ENST00000525745 TRIM22Q8IYM9 498 aa5.88□□□□□ -1.47
ECHDC1-218ENST00000525745 NBPF15Q8N660 670 aa5.88□□□□□ -1.47
ECHDC1-218ENST00000525745 WHAMMQ8TF30 809 aa5.88□□□□□ -1.47
ECHDC1-218ENST00000525745 DYRK1BQ9Y463 629 aa5.88□□□□□ -1.47
ECHDC1-218ENST00000525745 H7C1W4 665 aa5.87□□□□□ -1.47
ECHDC1-218ENST00000525745 WASLO00401 505 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-218ENST00000525745 IL2RAP01589 272 aa5.87□□□□□ -1.47
ECHDC1-218ENST00000525745 SLURP2P0DP57 97 aa5.87□□□□□ -1.47
ECHDC1-218ENST00000525745 GAS6Q14393 721 aa5.87□□□□□ -1.47
ECHDC1-218ENST00000525745 DBN1Q16643 649 aa5.87□□□□□ -1.47
ECHDC1-218ENST00000525745 FOXR1Q6PIV2 292 aa5.87□□□□□ -1.47
ECHDC1-218ENST00000525745 GTPBP3Q969Y2 492 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-218ENST00000525745 ESYT1Q9BSJ8 1104 aa5.87□□□□□ -1.47
ECHDC1-218ENST00000525745 TIMMDC1Q9NPL8 285 aa5.87□□□□□ -1.47
ECHDC1-218ENST00000525745 ADAMTS8Q9UP79 889 aa5.87□□□□□ -1.47
ECHDC1-218ENST00000525745 SPATA31C2B4DYI2 1134 aa5.86□□□□□ -1.47
ECHDC1-218ENST00000525745 GTF2E1P29083 439 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-218ENST00000525745 PHKA2P46019 1235 aa5.86□□□□□ -1.47
ECHDC1-218ENST00000525745 CENPCQ03188 943 aa5.86□□□□□ -1.47
ECHDC1-218ENST00000525745 USP4Q13107 963 aa5.86□□□□□ -1.47
ECHDC1-218ENST00000525745 MCM6Q14566 821 aa5.86□□□□□ -1.47
ECHDC1-218ENST00000525745 GMCL1Q96IK5 515 aa5.86□□□□□ -1.47
ECHDC1-218ENST00000525745 ZSCAN10Q96SZ4 725 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-218ENST00000525745 STAU1O95793 577 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-218ENST00000525745 SRSF11Q05519 484 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-218ENST00000525745 WASHC4Q2M389 1173 aa5.85□□□□□ -1.47
ECHDC1-218ENST00000525745 ESCO1Q5FWF5 840 aa5.85□□□□□ -1.47
ECHDC1-218ENST00000525745 TMEM214Q6NUQ4 689 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-218ENST00000525745 PHTF2Q8N3S3 785 aa5.85□□□□□ -1.47
ECHDC1-218ENST00000525745 TRERF1Q96PN7 1200 aa5.85□□□□□ -1.47
ECHDC1-218ENST00000525745 GPAMQ9HCL2 828 aa5.85□□□□□ -1.47
ECHDC1-218ENST00000525745 F11P03951 625 aa5.84□□□□□ -1.47
ECHDC1-218ENST00000525745 MAP3K10Q02779 954 aa5.84□□□□□ -1.47
ECHDC1-218ENST00000525745 SEMA3FQ13275 785 aa5.84□□□□□ -1.47
ECHDC1-218ENST00000525745 WDR44Q5JSH3 913 aa5.84□□□□□ -1.47
ECHDC1-218ENST00000525745 GNASQ5JWF2 1037 aa5.84□□□□□ -1.47
ECHDC1-218ENST00000525745 XAGE2Q96GT9 111 aa5.84□□□□□ -1.47
ECHDC1-218ENST00000525745 NUCKS1Q9H1E3 243 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-218ENST00000525745 MBIPQ9NS73 344 aa5.84□□□□□ -1.47
ECHDC1-218ENST00000525745 RNF225M0QZC1 329 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-218ENST00000525745 MARSP56192 900 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-218ENST00000525745 LYPD4Q6UWN0 246 aa5.83□□□□□ -1.48
ECHDC1-218ENST00000525745 SIRT1Q96EB6 747 aa5.83□□□□□ -1.48
ECHDC1-218ENST00000525745 ETNK1Q9HBU6 452 aa5.83□□□□□ -1.48
ECHDC1-218ENST00000525745 IGF1RP08069 1367 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms