RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 IL16Q14005 1332 aa11.37□□□□□ -0.59
PABPC4-220ENST00000525669 LMOD3Q0VAK6 560 aa11.37□□□□□ -0.59
PABPC4-220ENST00000525669 PARP4Q9UKK3 1724 aaKnown RBP11.37□□□□□ -0.59
PABPC4-220ENST00000525669 PKD1L3Q7Z443 1732 aa11.36□□□□□ -0.59
PABPC4-220ENST00000525669 BCAR3O75815 825 aa11.36□□□□□ -0.59
PABPC4-220ENST00000525669 GAS2L2Q8NHY3 880 aa11.36□□□□□ -0.59
PABPC4-220ENST00000525669 COL5A2P05997 1499 aaPredicted RBP11.36□□□□□ -0.59
PABPC4-220ENST00000525669 MEGF6O75095 1541 aa11.35□□□□□ -0.59
PABPC4-220ENST00000525669 MAPK8IP2Q13387 824 aaPredicted RBP11.35□□□□□ -0.59
PABPC4-220ENST00000525669 CERKQ8TCT0 537 aa11.35□□□□□ -0.59
PABPC4-220ENST00000525669 STRN4Q9NRL3 753 aa11.35□□□□□ -0.59
PABPC4-220ENST00000525669 MBIPQ9NS73 344 aa11.35□□□□□ -0.59
PABPC4-220ENST00000525669 MAP3K5Q99683 1374 aa11.35□□□□□ -0.59
PABPC4-220ENST00000525669 SHANK3Q9BYB0 1731 aa11.35□□□□□ -0.59
PABPC4-220ENST00000525669 CRB1P82279 1406 aa11.35□□□□□ -0.59
PABPC4-220ENST00000525669 SCN11AQ9UI33 1791 aa11.34□□□□□ -0.59
PABPC4-220ENST00000525669 NUTM2BA6NNL0 878 aaPredicted RBP11.34□□□□□ -0.59
PABPC4-220ENST00000525669 GNAT3A8MTJ3 354 aa11.34□□□□□ -0.59
PABPC4-220ENST00000525669 NUTM2EB1AL46 878 aaPredicted RBP11.34□□□□□ -0.59
PABPC4-220ENST00000525669 GNAI1P63096 354 aa11.34□□□□□ -0.59
PABPC4-220ENST00000525669 CALD1Q05682 793 aaKnown RBP11.34□□□□□ -0.59
PABPC4-220ENST00000525669 NUTM2AQ8IVF1 878 aaPredicted RBP11.34□□□□□ -0.59
PABPC4-220ENST00000525669 RTF1Q92541 710 aaKnown RBP11.34□□□□□ -0.59
PABPC4-220ENST00000525669 BCL2L13Q9BXK5 485 aa11.34□□□□□ -0.59
PABPC4-220ENST00000525669 IFT57Q9NWB7 429 aa11.34□□□□□ -0.59
PABPC4-220ENST00000525669 MIS18AQ9NYP9 233 aa11.34□□□□□ -0.59
PABPC4-220ENST00000525669 WNK3Q9BYP7 1800 aa11.34□□□□□ -0.59
PABPC4-220ENST00000525669 NRAPQ86VF7 1730 aa11.34□□□□□ -0.59
PABPC4-220ENST00000525669 SIPA1L3O60292 1781 aaPredicted RBP11.33□□□□□ -0.59
PABPC4-220ENST00000525669 ZNF853P0CG23 659 aa11.33□□□□□ -0.6
PABPC4-220ENST00000525669 PLEKHO1Q53GL0 409 aaPredicted RBP11.33□□□□□ -0.6
PABPC4-220ENST00000525669 C20orf194Q5TEA3 1177 aa11.33□□□□□ -0.6
PABPC4-220ENST00000525669 ZNF530Q6P9A1 599 aaPredicted RBP11.33□□□□□ -0.6
PABPC4-220ENST00000525669 TOM1L2Q6ZVM7 507 aa11.33□□□□□ -0.6
PABPC4-220ENST00000525669 KDM3BQ7LBC6 1761 aa11.33□□□□□ -0.6
PABPC4-220ENST00000525669 WDR17Q8IZU2 1322 aa11.33□□□□□ -0.6
PABPC4-220ENST00000525669 ELL2O00472 640 aaPredicted RBP11.32□□□□□ -0.6
PABPC4-220ENST00000525669 ADAMTS2O95450 1211 aa11.32□□□□□ -0.6
PABPC4-220ENST00000525669 RARSP54136 660 aaKnown RBP11.32□□□□□ -0.6
PABPC4-220ENST00000525669 EVA1CP58658 441 aa11.32□□□□□ -0.6
PABPC4-220ENST00000525669 LARP1Q6PKG0 1096 aaKnown RBP11.32□□□□□ -0.6
PABPC4-220ENST00000525669 IL17REQ8NFR9 667 aa11.32□□□□□ -0.6
PABPC4-220ENST00000525669 RAPGEF4Q8WZA2 1011 aa11.32□□□□□ -0.6
PABPC4-220ENST00000525669 CFAP44Q96MT7 982 aa11.32□□□□□ -0.6
PABPC4-220ENST00000525669 LGR6Q9HBX8 967 aa11.32□□□□□ -0.6
PABPC4-220ENST00000525669 BTG4Q9NY30 223 aa11.32□□□□□ -0.6
PABPC4-220ENST00000525669 ADAMTS7Q9UKP4 1686 aa11.31□□□□□ -0.6
PABPC4-220ENST00000525669 TATP17735 454 aaPredicted RBP11.31□□□□□ -0.6
PABPC4-220ENST00000525669 KRT24Q2M2I5 525 aa11.31□□□□□ -0.6
PABPC4-220ENST00000525669 MPRIPQ6WCQ1 1025 aa11.31□□□□□ -0.6
PABPC4-220ENST00000525669 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
PABPC4-220ENST00000525669 EXOC6Q8TAG9 804 aa11.31□□□□□ -0.6
PABPC4-220ENST00000525669 HTATSF1O43719 755 aaKnown RBP11.3□□□□□ -0.6
PABPC4-220ENST00000525669 KCNA4P22459 653 aa11.3□□□□□ -0.6
PABPC4-220ENST00000525669 AMOTQ4VCS5 1084 aa11.3□□□□□ -0.6
PABPC4-220ENST00000525669 C8orf58Q8NAV2 365 aa11.3□□□□□ -0.6
PABPC4-220ENST00000525669 FRAT1Q92837 279 aaPredicted RBP11.3□□□□□ -0.6
PABPC4-220ENST00000525669 CRBNQ96SW2 442 aa11.3□□□□□ -0.6
PABPC4-220ENST00000525669 TNNQ9UQP3 1299 aa11.3□□□□□ -0.6
PABPC4-220ENST00000525669 CHL1O00533 1208 aa11.29□□□□□ -0.6
PABPC4-220ENST00000525669 TCERG1O14776 1098 aaKnown RBP11.29□□□□□ -0.6
PABPC4-220ENST00000525669 AKAP4Q5JQC9 854 aa11.29□□□□□ -0.6
PABPC4-220ENST00000525669 C1orf141Q5JVX7 400 aa11.29□□□□□ -0.6
PABPC4-220ENST00000525669 USP35Q9P2H5 1018 aa11.29□□□□□ -0.6
PABPC4-220ENST00000525669 NWD2Q9ULI1 1742 aa11.29□□□□□ -0.6
PABPC4-220ENST00000525669 CANXP27824 592 aaKnown RBP11.28□□□□□ -0.6
PABPC4-220ENST00000525669 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
PABPC4-220ENST00000525669 SMC4Q9NTJ3 1288 aa11.28□□□□□ -0.6
PABPC4-220ENST00000525669 TSPYL4Q9UJ04 414 aa11.28□□□□□ -0.6
PABPC4-220ENST00000525669 OVOS2A0A0G2JMS6 1433 aa11.27□□□□□ -0.6
PABPC4-220ENST00000525669 RNMTO43148 476 aaKnown RBP11.27□□□□□ -0.61
PABPC4-220ENST00000525669 VAMP4O75379 141 aa11.27□□□□□ -0.61
PABPC4-220ENST00000525669 TWISTNBQ3B726 338 aaPredicted RBP11.27□□□□□ -0.61
PABPC4-220ENST00000525669 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.27□□□□□ -0.61
PABPC4-220ENST00000525669 CARD10Q9BWT7 1032 aa11.27□□□□□ -0.61
PABPC4-220ENST00000525669 PPP4R2Q9NY27 417 aa11.27□□□□□ -0.61
PABPC4-220ENST00000525669 SPG7Q9UQ90 795 aa11.27□□□□□ -0.61
PABPC4-220ENST00000525669 CEMIPQ8WUJ3 1361 aa11.27□□□□□ -0.61
PABPC4-220ENST00000525669 KDM6AO15550 1401 aaPredicted RBP11.26□□□□□ -0.61
PABPC4-220ENST00000525669 TOGARAM1Q9Y4F4 1720 aa11.26□□□□□ -0.61
PABPC4-220ENST00000525669 CT47B1P0C2W7 299 aaPredicted RBP11.26□□□□□ -0.61
PABPC4-220ENST00000525669 PHKG2P15735 406 aa11.26□□□□□ -0.61
PABPC4-220ENST00000525669 TAF7Q15545 349 aaPredicted RBP11.26□□□□□ -0.61
PABPC4-220ENST00000525669 B4GALNT3Q6L9W6 998 aa11.26□□□□□ -0.61
PABPC4-220ENST00000525669 PANK1Q8TE04 598 aa11.26□□□□□ -0.61
PABPC4-220ENST00000525669 C5P01031 1676 aa11.25□□□□□ -0.61
PABPC4-220ENST00000525669 CYP27B1O15528 508 aa11.25□□□□□ -0.61
PABPC4-220ENST00000525669 KCNQ3O43525 872 aa11.25□□□□□ -0.61
PABPC4-220ENST00000525669 IL2RBP14784 551 aa11.25□□□□□ -0.61
PABPC4-220ENST00000525669 ERICH6BQ5W0A0 696 aa11.25□□□□□ -0.61
PABPC4-220ENST00000525669 CLUAP1Q96AJ1 413 aa11.25□□□□□ -0.61
PABPC4-220ENST00000525669 JCADQ9P266 1359 aa11.25□□□□□ -0.61
PABPC4-220ENST00000525669 LRP6O75581 1613 aa11.24□□□□□ -0.61
PABPC4-220ENST00000525669 HSPA1LP34931 641 aa11.24□□□□□ -0.61
PABPC4-220ENST00000525669 TEFQ10587 303 aa11.24□□□□□ -0.61
PABPC4-220ENST00000525669 IFNL2Q8IZJ0 200 aa11.24□□□□□ -0.61
PABPC4-220ENST00000525669 MRPL50Q8N5N7 158 aaKnown RBP11.24□□□□□ -0.61
PABPC4-220ENST00000525669 NOB1Q9ULX3 412 aaKnown RBP11.24□□□□□ -0.61
PABPC4-220ENST00000525669 ITGB4P16144 1822 aa11.23□□□□□ -0.61
PABPC4-220ENST00000525669 RLBP1P12271 317 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms