RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 PRIM1P49642 420 aaKnown RBP16.42■□□□□ 0.22
NDUFS3-204ENST00000525378 NBPF6Q5VWK0 638 aa16.42■□□□□ 0.22
NDUFS3-204ENST00000525378 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
NDUFS3-204ENST00000525378 ZCRB1Q8TBF4 217 aaKnown RBP16.42■□□□□ 0.22
NDUFS3-204ENST00000525378 SYTL4Q96C24 671 aaPredicted RBP16.42■□□□□ 0.22
NDUFS3-204ENST00000525378 NBPF4Q96M43 638 aa16.42■□□□□ 0.22
NDUFS3-204ENST00000525378 SYT17Q9BSW7 474 aa16.42■□□□□ 0.22
NDUFS3-204ENST00000525378 FHDC1Q9C0D6 1143 aaPredicted RBP16.42■□□□□ 0.22
NDUFS3-204ENST00000525378 NSD2O96028 1365 aa16.41■□□□□ 0.22
NDUFS3-204ENST00000525378 KCNQ4P56696 695 aa16.41■□□□□ 0.22
NDUFS3-204ENST00000525378 AKT1S1Q96B36 256 aa16.41■□□□□ 0.22
NDUFS3-204ENST00000525378 COL24A1Q17RW2 1714 aa16.41■□□□□ 0.22
NDUFS3-204ENST00000525378 CHD4Q14839 1912 aa16.4■□□□□ 0.22
NDUFS3-204ENST00000525378 HSP90AB2PQ58FF8 381 aa16.39■□□□□ 0.21
NDUFS3-204ENST00000525378 SLC27A3Q5K4L6 730 aa16.39■□□□□ 0.21
NDUFS3-204ENST00000525378 MAP2P11137 1827 aaKnown RBP16.39■□□□□ 0.21
NDUFS3-204ENST00000525378 ARXQ96QS3 562 aa16.38■□□□□ 0.21
NDUFS3-204ENST00000525378 CARD14Q9BXL6 1004 aa16.38■□□□□ 0.21
NDUFS3-204ENST00000525378 PNPLA7Q6ZV29 1317 aa16.38■□□□□ 0.21
NDUFS3-204ENST00000525378 INSRP06213 1382 aa16.38■□□□□ 0.21
NDUFS3-204ENST00000525378 SMG6Q86US8 1419 aaKnown RBP16.37■□□□□ 0.21
NDUFS3-204ENST00000525378 CDCA8Q53HL2 280 aa16.37■□□□□ 0.21
NDUFS3-204ENST00000525378 ITGB4P16144 1822 aa16.37■□□□□ 0.21
NDUFS3-204ENST00000525378 NSD3Q9BZ95 1437 aa16.36■□□□□ 0.21
NDUFS3-204ENST00000525378 FLT4P35916 1363 aa16.36■□□□□ 0.21
NDUFS3-204ENST00000525378 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
NDUFS3-204ENST00000525378 TATP17735 454 aaPredicted RBP16.35■□□□□ 0.21
NDUFS3-204ENST00000525378 RAPGEF4Q8WZA2 1011 aa16.35■□□□□ 0.21
NDUFS3-204ENST00000525378 EMILIN1Q9Y6C2 1016 aa16.35■□□□□ 0.21
NDUFS3-204ENST00000525378 ANKRD26Q9UPS8 1709 aa16.35■□□□□ 0.21
NDUFS3-204ENST00000525378 TOGARAM1Q9Y4F4 1720 aa16.35■□□□□ 0.21
NDUFS3-204ENST00000525378 CGNL1Q0VF96 1302 aa16.35■□□□□ 0.21
NDUFS3-204ENST00000525378 PKD1L3Q7Z443 1732 aa16.34■□□□□ 0.21
NDUFS3-204ENST00000525378 SLC16A10Q8TF71 515 aa16.34■□□□□ 0.21
NDUFS3-204ENST00000525378 TFCP2L1Q9NZI6 479 aa16.34■□□□□ 0.21
NDUFS3-204ENST00000525378 KIF24Q5T7B8 1368 aa16.34■□□□□ 0.21
NDUFS3-204ENST00000525378 C5P01031 1676 aa16.34■□□□□ 0.21
NDUFS3-204ENST00000525378 CCNL1Q9UK58 526 aaPredicted RBP16.33■□□□□ 0.2
NDUFS3-204ENST00000525378 MAP3K5Q99683 1374 aa16.33■□□□□ 0.2
NDUFS3-204ENST00000525378 PCDH11XQ9BZA7 1347 aa16.31■□□□□ 0.2
NDUFS3-204ENST00000525378 PCDH11YQ9BZA8 1340 aa16.31■□□□□ 0.2
NDUFS3-204ENST00000525378 CYP27B1O15528 508 aa16.31■□□□□ 0.2
NDUFS3-204ENST00000525378 TIMELESSQ9UNS1 1208 aa16.31■□□□□ 0.2
NDUFS3-204ENST00000525378 UTRNP46939 3433 aa16.3■□□□□ 0.2
NDUFS3-204ENST00000525378 NCAPD2Q15021 1401 aa16.29■□□□□ 0.2
NDUFS3-204ENST00000525378 PPM1GO15355 546 aaPredicted RBP16.29■□□□□ 0.2
NDUFS3-204ENST00000525378 POLD1P28340 1107 aa16.29■□□□□ 0.2
NDUFS3-204ENST00000525378 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
NDUFS3-204ENST00000525378 MPRIPQ6WCQ1 1025 aa16.28■□□□□ 0.2
NDUFS3-204ENST00000525378 COL23A1Q86Y22 540 aaPredicted RBP16.28■□□□□ 0.2
NDUFS3-204ENST00000525378 PCGF6Q9BYE7 350 aa16.28■□□□□ 0.2
NDUFS3-204ENST00000525378 ZNF784Q8NCA9 323 aaPredicted RBP16.27■□□□□ 0.2
NDUFS3-204ENST00000525378 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
NDUFS3-204ENST00000525378 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
NDUFS3-204ENST00000525378 CLSPNQ9HAW4 1339 aa16.26■□□□□ 0.19
NDUFS3-204ENST00000525378 MSH5O43196 834 aa16.26■□□□□ 0.19
NDUFS3-204ENST00000525378 POLR3GLQ9BT43 218 aa16.26■□□□□ 0.19
NDUFS3-204ENST00000525378 UBR3Q6ZT12 1888 aa16.26■□□□□ 0.19
NDUFS3-204ENST00000525378 C4BP0C0L5 1744 aa16.25■□□□□ 0.19
NDUFS3-204ENST00000525378 GPR162Q16538 588 aa16.25■□□□□ 0.19
NDUFS3-204ENST00000525378 NLGN2Q8NFZ4 835 aa16.25■□□□□ 0.19
NDUFS3-204ENST00000525378 EYA1Q99502 592 aa16.25■□□□□ 0.19
NDUFS3-204ENST00000525378 POLKQ9UBT6 870 aa16.25■□□□□ 0.19
NDUFS3-204ENST00000525378 MSL1Q68DK7 614 aa16.24■□□□□ 0.19
NDUFS3-204ENST00000525378 NKX1-1Q15270 411 aaPredicted RBP16.23■□□□□ 0.19
NDUFS3-204ENST00000525378 PIGBQ92521 554 aa16.23■□□□□ 0.19
NDUFS3-204ENST00000525378 TNNT2P45379 298 aaPredicted RBP16.22■□□□□ 0.19
NDUFS3-204ENST00000525378 PELP1Q8IZL8 1130 aaKnown RBP16.22■□□□□ 0.19
NDUFS3-204ENST00000525378 SPG7Q9UQ90 795 aa16.22■□□□□ 0.19
NDUFS3-204ENST00000525378 AMIGO3Q86WK7 504 aa16.21■□□□□ 0.19
NDUFS3-204ENST00000525378 SMARCC1Q92922 1105 aaPredicted RBP16.21■□□□□ 0.19
NDUFS3-204ENST00000525378 HSPA5P11021 654 aaKnown RBP16.2■□□□□ 0.18
NDUFS3-204ENST00000525378 EIF4A2Q14240 407 aaKnown RBP16.2■□□□□ 0.18
NDUFS3-204ENST00000525378 SMIM5Q71RC9 77 aa16.2■□□□□ 0.18
NDUFS3-204ENST00000525378 EIF4G2P78344 907 aaKnown RBP eCLIP16.19■□□□□ 0.18
NDUFS3-204ENST00000525378 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.19■□□□□ 0.18
NDUFS3-204ENST00000525378 PHKG2P15735 406 aa16.18■□□□□ 0.18
NDUFS3-204ENST00000525378 YBX3P16989 372 aaKnown RBP eCLIP16.18■□□□□ 0.187e-14■□□□□ 9.2
NDUFS3-204ENST00000525378 IFNL2Q8IZJ0 200 aa16.18■□□□□ 0.18
NDUFS3-204ENST00000525378 FLAD1Q8NFF5 587 aa16.18■□□□□ 0.18
NDUFS3-204ENST00000525378 AK7Q96M32 723 aa16.18■□□□□ 0.18
NDUFS3-204ENST00000525378 PANK3Q9H999 370 aa16.18■□□□□ 0.18
NDUFS3-204ENST00000525378 LOC102724428A0A0B4J2F2 783 aa16.17■□□□□ 0.18
NDUFS3-204ENST00000525378 SIK1P57059 783 aa16.17■□□□□ 0.18
NDUFS3-204ENST00000525378 LINC00116Q8NCU8 138 aa16.17■□□□□ 0.18
NDUFS3-204ENST00000525378 ASAP1Q9ULH1 1129 aa16.17■□□□□ 0.18
NDUFS3-204ENST00000525378 PHF14O94880 888 aa16.16■□□□□ 0.18
NDUFS3-204ENST00000525378 HMGB2P26583 209 aaKnown RBP16.16■□□□□ 0.18
NDUFS3-204ENST00000525378 TMOD3Q9NYL9 352 aa16.16■□□□□ 0.18
NDUFS3-204ENST00000525378 IGSF1Q8N6C5 1336 aa16.16■□□□□ 0.18
NDUFS3-204ENST00000525378 ITPK1Q13572 414 aa16.15■□□□□ 0.18
NDUFS3-204ENST00000525378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
NDUFS3-204ENST00000525378 ATG3Q9NT62 314 aa16.14■□□□□ 0.17
NDUFS3-204ENST00000525378 ATP6V1AP38606 617 aa16.13■□□□□ 0.17
NDUFS3-204ENST00000525378 CD2APQ9Y5K6 639 aa16.13■□□□□ 0.17
NDUFS3-204ENST00000525378 GOLGB1Q14789 3259 aaKnown RBP16.13■□□□□ 0.17
NDUFS3-204ENST00000525378 SSFA2P28290 1259 aa16.12■□□□□ 0.17
NDUFS3-204ENST00000525378 PLEKHG2Q9H7P9 1386 aa16.12■□□□□ 0.17
NDUFS3-204ENST00000525378 COL5A3P25940 1745 aaPredicted RBP16.11■□□□□ 0.17
NDUFS3-204ENST00000525378 GRIN3BO60391 1043 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms