RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 ITGB4P16144 1822 aa13.5□□□□□ -0.25
TRAPPC4-206ENST00000525303 C5P01031 1676 aa13.5□□□□□ -0.25
TRAPPC4-206ENST00000525303 MAP3K19Q56UN5 1328 aa13.49□□□□□ -0.25
TRAPPC4-206ENST00000525303 FBLN1P23142 703 aa13.49□□□□□ -0.25
TRAPPC4-206ENST00000525303 SLC27A3Q5K4L6 730 aa13.49□□□□□ -0.25
TRAPPC4-206ENST00000525303 SYTL4Q96C24 671 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC4-206ENST00000525303 COG3Q96JB2 828 aa13.49□□□□□ -0.25
TRAPPC4-206ENST00000525303 MEGF6O75095 1541 aa13.49□□□□□ -0.25
TRAPPC4-206ENST00000525303 ANKRD36BQ8N2N9 1353 aa13.48□□□□□ -0.25
TRAPPC4-206ENST00000525303 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
TRAPPC4-206ENST00000525303 HOXC9P31274 260 aa13.48□□□□□ -0.25
TRAPPC4-206ENST00000525303 AMPHP49418 695 aa13.48□□□□□ -0.25
TRAPPC4-206ENST00000525303 TESK2Q96S53 571 aa13.48□□□□□ -0.25
TRAPPC4-206ENST00000525303 PNPLA7Q6ZV29 1317 aa13.47□□□□□ -0.25
TRAPPC4-206ENST00000525303 PRIM1P49642 420 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-206ENST00000525303 KCNQ4P56696 695 aa13.47□□□□□ -0.25
TRAPPC4-206ENST00000525303 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
TRAPPC4-206ENST00000525303 NSD2O96028 1365 aa13.46□□□□□ -0.25
TRAPPC4-206ENST00000525303 SLC16A10Q8TF71 515 aa13.46□□□□□ -0.25
TRAPPC4-206ENST00000525303 TFCP2L1Q9NZI6 479 aa13.46□□□□□ -0.25
TRAPPC4-206ENST00000525303 POLD1P28340 1107 aa13.45□□□□□ -0.26
TRAPPC4-206ENST00000525303 GPR162Q16538 588 aa13.45□□□□□ -0.26
TRAPPC4-206ENST00000525303 ZCRB1Q8TBF4 217 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-206ENST00000525303 MAP2P11137 1827 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-206ENST00000525303 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
TRAPPC4-206ENST00000525303 TOGARAM1Q9Y4F4 1720 aa13.44□□□□□ -0.26
TRAPPC4-206ENST00000525303 RRS1Q15050 365 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-206ENST00000525303 SLC24A1O60721 1099 aa13.43□□□□□ -0.26
TRAPPC4-206ENST00000525303 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-206ENST00000525303 USHBP1Q8N6Y0 703 aa13.43□□□□□ -0.26
TRAPPC4-206ENST00000525303 CCNL1Q9UK58 526 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC4-206ENST00000525303 PKD1L3Q7Z443 1732 aa13.42□□□□□ -0.26
TRAPPC4-206ENST00000525303 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
TRAPPC4-206ENST00000525303 NBPF6Q5VWK0 638 aa13.42□□□□□ -0.26
TRAPPC4-206ENST00000525303 NBPF4Q96M43 638 aa13.42□□□□□ -0.26
TRAPPC4-206ENST00000525303 GGNBP2Q9H3C7 697 aa13.42□□□□□ -0.26
TRAPPC4-206ENST00000525303 USP47Q96K76 1375 aa13.42□□□□□ -0.26
TRAPPC4-206ENST00000525303 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
TRAPPC4-206ENST00000525303 FYB1O15117 783 aa13.41□□□□□ -0.26
TRAPPC4-206ENST00000525303 CGNL1Q0VF96 1302 aa13.4□□□□□ -0.26
TRAPPC4-206ENST00000525303 ANKRD26Q9UPS8 1709 aa13.4□□□□□ -0.26
TRAPPC4-206ENST00000525303 NLGN2Q8NFZ4 835 aa13.4□□□□□ -0.26
TRAPPC4-206ENST00000525303 RAPGEF4Q8WZA2 1011 aa13.4□□□□□ -0.26
TRAPPC4-206ENST00000525303 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
TRAPPC4-206ENST00000525303 C4BP0C0L5 1744 aa13.39□□□□□ -0.27
TRAPPC4-206ENST00000525303 C1QTNF8P60827 252 aa13.39□□□□□ -0.27
TRAPPC4-206ENST00000525303 TMF1P82094 1093 aa13.39□□□□□ -0.27
TRAPPC4-206ENST00000525303 INSRP06213 1382 aa13.38□□□□□ -0.27
TRAPPC4-206ENST00000525303 SENP3-EIF4A1A0A087X0R7 540 aa13.38□□□□□ -0.27
TRAPPC4-206ENST00000525303 TATP17735 454 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-206ENST00000525303 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
TRAPPC4-206ENST00000525303 COL23A1Q86Y22 540 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-206ENST00000525303 FLT4P35916 1363 aa13.37□□□□□ -0.27
TRAPPC4-206ENST00000525303 MSL1Q68DK7 614 aa13.37□□□□□ -0.27
TRAPPC4-206ENST00000525303 PCDH11XQ9BZA7 1347 aa13.37□□□□□ -0.27
TRAPPC4-206ENST00000525303 PCDH11YQ9BZA8 1340 aa13.37□□□□□ -0.27
TRAPPC4-206ENST00000525303 MPRIPQ6WCQ1 1025 aa13.36□□□□□ -0.27
TRAPPC4-206ENST00000525303 KIF24Q5T7B8 1368 aa13.35□□□□□ -0.27
TRAPPC4-206ENST00000525303 PALLDQ8WX93 1383 aa13.35□□□□□ -0.27
TRAPPC4-206ENST00000525303 YBX3P16989 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAPPC4-206ENST00000525303 CYP27B1O15528 508 aa13.34□□□□□ -0.27
TRAPPC4-206ENST00000525303 GIGYF1O75420 1035 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC4-206ENST00000525303 CEP350Q5VT06 3117 aa13.33□□□□□ -0.27
TRAPPC4-206ENST00000525303 NSD3Q9BZ95 1437 aa13.33□□□□□ -0.28
TRAPPC4-206ENST00000525303 GRIN3BO60391 1043 aa13.33□□□□□ -0.28
TRAPPC4-206ENST00000525303 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC4-206ENST00000525303 CDCA8Q53HL2 280 aa13.32□□□□□ -0.28
TRAPPC4-206ENST00000525303 FLAD1Q8NFF5 587 aa13.32□□□□□ -0.28
TRAPPC4-206ENST00000525303 EMILIN1Q9Y6C2 1016 aa13.32□□□□□ -0.28
TRAPPC4-206ENST00000525303 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
TRAPPC4-206ENST00000525303 CARD14Q9BXL6 1004 aa13.31□□□□□ -0.28
TRAPPC4-206ENST00000525303 PPM1GO15355 546 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC4-206ENST00000525303 HMGB2P26583 209 aaKnown RBP13.3□□□□□ -0.28
TRAPPC4-206ENST00000525303 SMARCC1Q92922 1105 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC4-206ENST00000525303 AK7Q96M32 723 aa13.3□□□□□ -0.28
TRAPPC4-206ENST00000525303 CD2APQ9Y5K6 639 aa13.3□□□□□ -0.28
TRAPPC4-206ENST00000525303 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC4-206ENST00000525303 KIF13BQ9NQT8 1826 aa13.29□□□□□ -0.28
TRAPPC4-206ENST00000525303 PHF14O94880 888 aa13.29□□□□□ -0.28
TRAPPC4-206ENST00000525303 AMIGO3Q86WK7 504 aa13.29□□□□□ -0.28
TRAPPC4-206ENST00000525303 PIGBQ92521 554 aa13.29□□□□□ -0.28
TRAPPC4-206ENST00000525303 ATP10DQ9P241 1426 aa13.29□□□□□ -0.28
TRAPPC4-206ENST00000525303 COL5A3P25940 1745 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-206ENST00000525303 SMIM5Q71RC9 77 aa13.28□□□□□ -0.28
TRAPPC4-206ENST00000525303 VIRMAQ69YN4 1812 aaKnown RBP13.27□□□□□ -0.28
TRAPPC4-206ENST00000525303 NKX1-1Q15270 411 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC4-206ENST00000525303 SPG7Q9UQ90 795 aa13.27□□□□□ -0.29
TRAPPC4-206ENST00000525303 WASHC2AQ641Q2 1341 aa13.27□□□□□ -0.29
TRAPPC4-206ENST00000525303 KIAA1551Q9HCM1 1747 aa13.27□□□□□ -0.29
TRAPPC4-206ENST00000525303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-206ENST00000525303 ZNF831Q5JPB2 1677 aa13.26□□□□□ -0.29
TRAPPC4-206ENST00000525303 MYH14Q7Z406 1995 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-206ENST00000525303 LINC00116Q8NCU8 138 aa13.26□□□□□ -0.29
TRAPPC4-206ENST00000525303 EYA1Q99502 592 aa13.26□□□□□ -0.29
TRAPPC4-206ENST00000525303 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
TRAPPC4-206ENST00000525303 BRCA1P38398 1863 aaKnown RBP13.25□□□□□ -0.29
TRAPPC4-206ENST00000525303 IGSF1Q8N6C5 1336 aa13.25□□□□□ -0.29
TRAPPC4-206ENST00000525303 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
TRAPPC4-206ENST00000525303 SSFA2P28290 1259 aa13.25□□□□□ -0.29
TRAPPC4-206ENST00000525303 SIK1P57059 783 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms