RNA–Protein interactions for RNA: ENST00000525283.5

FDFT1-204, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-204ENST00000525283 ZNF827Q17R98 1081 aa17.62■□□□□ 0.41
FDFT1-204ENST00000525283 CDCA8Q53HL2 280 aa17.62■□□□□ 0.41
FDFT1-204ENST00000525283 ZCRB1Q8TBF4 217 aaKnown RBP17.62■□□□□ 0.41
FDFT1-204ENST00000525283 USP47Q96K76 1375 aa17.62■□□□□ 0.41
FDFT1-204ENST00000525283 C5P01031 1676 aa17.61■□□□□ 0.41
FDFT1-204ENST00000525283 MSH5O43196 834 aa17.61■□□□□ 0.41
FDFT1-204ENST00000525283 GPR162Q16538 588 aa17.61■□□□□ 0.41
FDFT1-204ENST00000525283 PELP1Q8IZL8 1130 aaKnown RBP17.61■□□□□ 0.41
FDFT1-204ENST00000525283 SLC16A10Q8TF71 515 aa17.61■□□□□ 0.41
FDFT1-204ENST00000525283 TESK2Q96S53 571 aa17.61■□□□□ 0.41
FDFT1-204ENST00000525283 MEGF6O75095 1541 aa17.61■□□□□ 0.41
FDFT1-204ENST00000525283 PRIM1P49642 420 aaKnown RBP17.6■□□□□ 0.41
FDFT1-204ENST00000525283 CGNL1Q0VF96 1302 aa17.6■□□□□ 0.41
FDFT1-204ENST00000525283 MAP3K5Q99683 1374 aa17.59■□□□□ 0.41
FDFT1-204ENST00000525283 HMGB2P26583 209 aaKnown RBP17.59■□□□□ 0.41
FDFT1-204ENST00000525283 LRRC4BQ9NT99 713 aa17.59■□□□□ 0.41
FDFT1-204ENST00000525283 CCNL1Q9UK58 526 aaPredicted RBP17.59■□□□□ 0.41
FDFT1-204ENST00000525283 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.4
FDFT1-204ENST00000525283 RRS1Q15050 365 aaKnown RBP17.58■□□□□ 0.4
FDFT1-204ENST00000525283 SGIP1Q9BQI5 828 aa17.58■□□□□ 0.4
FDFT1-204ENST00000525283 GGNBP2Q9H3C7 697 aa17.58■□□□□ 0.4
FDFT1-204ENST00000525283 PCDH11XQ9BZA7 1347 aa17.57■□□□□ 0.4
FDFT1-204ENST00000525283 PCDH11YQ9BZA8 1340 aa17.57■□□□□ 0.4
FDFT1-204ENST00000525283 COL24A1Q17RW2 1714 aa17.57■□□□□ 0.4
FDFT1-204ENST00000525283 FLT4P35916 1363 aa17.56■□□□□ 0.4
FDFT1-204ENST00000525283 PNPLA7Q6ZV29 1317 aa17.56■□□□□ 0.4
FDFT1-204ENST00000525283 ZNF784Q8NCA9 323 aaPredicted RBP17.56■□□□□ 0.4
FDFT1-204ENST00000525283 AKT1S1Q96B36 256 aa17.56■□□□□ 0.4
FDFT1-204ENST00000525283 TAF1LQ8IZX4 1826 aa17.56■□□□□ 0.4
FDFT1-204ENST00000525283 FBLN1P23142 703 aa17.55■□□□□ 0.4
FDFT1-204ENST00000525283 USHBP1Q8N6Y0 703 aa17.55■□□□□ 0.4
FDFT1-204ENST00000525283 ITGB4P16144 1822 aa17.55■□□□□ 0.4
FDFT1-204ENST00000525283 UTRNP46939 3433 aa17.54■□□□□ 0.4
FDFT1-204ENST00000525283 KCNQ4P56696 695 aa17.54■□□□□ 0.4
FDFT1-204ENST00000525283 KIF24Q5T7B8 1368 aa17.53■□□□□ 0.4
FDFT1-204ENST00000525283 NSD2O96028 1365 aa17.53■□□□□ 0.4
FDFT1-204ENST00000525283 INSRP06213 1382 aa17.53■□□□□ 0.4
FDFT1-204ENST00000525283 PKD1L3Q7Z443 1732 aa17.52■□□□□ 0.4
FDFT1-204ENST00000525283 MAP2P11137 1827 aaKnown RBP17.52■□□□□ 0.4
FDFT1-204ENST00000525283 FYB1O15117 783 aa17.52■□□□□ 0.4
FDFT1-204ENST00000525283 NBPF6Q5VWK0 638 aa17.52■□□□□ 0.4
FDFT1-204ENST00000525283 NBPF4Q96M43 638 aa17.52■□□□□ 0.4
FDFT1-204ENST00000525283 PPM1GO15355 546 aaPredicted RBP17.51■□□□□ 0.39
FDFT1-204ENST00000525283 ANKRD26Q9UPS8 1709 aa17.51■□□□□ 0.39
FDFT1-204ENST00000525283 NSD3Q9BZ95 1437 aa17.5■□□□□ 0.39
FDFT1-204ENST00000525283 HSP90AB2PQ58FF8 381 aa17.49■□□□□ 0.39
FDFT1-204ENST00000525283 MPRIPQ6WCQ1 1025 aa17.49■□□□□ 0.39
FDFT1-204ENST00000525283 PALLDQ8WX93 1383 aa17.49■□□□□ 0.39
FDFT1-204ENST00000525283 C4BP0C0L5 1744 aa17.49■□□□□ 0.39
FDFT1-204ENST00000525283 TOGARAM1Q9Y4F4 1720 aa17.49■□□□□ 0.39
FDFT1-204ENST00000525283 TRIM26Q12899 539 aaPredicted RBP17.48■□□□□ 0.39
FDFT1-204ENST00000525283 FLAD1Q8NFF5 587 aa17.48■□□□□ 0.39
FDFT1-204ENST00000525283 SENP3-EIF4A1A0A087X0R7 540 aa17.47■□□□□ 0.39
FDFT1-204ENST00000525283 AK7Q96M32 723 aa17.47■□□□□ 0.39
FDFT1-204ENST00000525283 POLR3GLQ9BT43 218 aa17.47■□□□□ 0.39
FDFT1-204ENST00000525283 GRIN3BO60391 1043 aa17.46■□□□□ 0.39
FDFT1-204ENST00000525283 MSL1Q68DK7 614 aa17.46■□□□□ 0.39
FDFT1-204ENST00000525283 SMARCC1Q92922 1105 aaPredicted RBP17.46■□□□□ 0.39
FDFT1-204ENST00000525283 SPG7Q9UQ90 795 aa17.46■□□□□ 0.39
FDFT1-204ENST00000525283 GIGYF1O75420 1035 aaPredicted RBP17.45■□□□□ 0.38
FDFT1-204ENST00000525283 UBR3Q6ZT12 1888 aa17.45■□□□□ 0.38
FDFT1-204ENST00000525283 COL23A1Q86Y22 540 aaPredicted RBP17.44■□□□□ 0.38
FDFT1-204ENST00000525283 NLGN2Q8NFZ4 835 aa17.44■□□□□ 0.38
FDFT1-204ENST00000525283 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
FDFT1-204ENST00000525283 C1QTNF8P60827 252 aa17.42■□□□□ 0.38
FDFT1-204ENST00000525283 GOLGB1Q14789 3259 aaKnown RBP17.42■□□□□ 0.38
FDFT1-204ENST00000525283 PHF14O94880 888 aa17.41■□□□□ 0.38
FDFT1-204ENST00000525283 TMOD3Q9NYL9 352 aa17.41■□□□□ 0.38
FDFT1-204ENST00000525283 CYP27B1O15528 508 aa17.4■□□□□ 0.38
FDFT1-204ENST00000525283 TIMELESSQ9UNS1 1208 aa17.38■□□□□ 0.37
FDFT1-204ENST00000525283 CD2APQ9Y5K6 639 aa17.38■□□□□ 0.37
FDFT1-204ENST00000525283 WASHC2AQ641Q2 1341 aa17.37■□□□□ 0.37
FDFT1-204ENST00000525283 TNNT2P45379 298 aaPredicted RBP17.36■□□□□ 0.37
FDFT1-204ENST00000525283 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
FDFT1-204ENST00000525283 CARD14Q9BXL6 1004 aa17.36■□□□□ 0.37
FDFT1-204ENST00000525283 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.35■□□□□ 0.37
FDFT1-204ENST00000525283 YBX3P16989 372 aaKnown RBP eCLIP17.35■□□□□ 0.373e-19■□□□□ 9.9
FDFT1-204ENST00000525283 SSFA2P28290 1259 aa17.35■□□□□ 0.37
FDFT1-204ENST00000525283 PIGBQ92521 554 aa17.35■□□□□ 0.37
FDFT1-204ENST00000525283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.35■□□□□ 0.379e-26■□□□□ 11.3
FDFT1-204ENST00000525283 NCAPD2Q15021 1401 aa17.35■□□□□ 0.37
FDFT1-204ENST00000525283 LOC102724428A0A0B4J2F2 783 aa17.34■□□□□ 0.37
FDFT1-204ENST00000525283 GNPATO15228 680 aa17.34■□□□□ 0.37
FDFT1-204ENST00000525283 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
FDFT1-204ENST00000525283 SIK1P57059 783 aa17.34■□□□□ 0.37
FDFT1-204ENST00000525283 PCGF6Q9BYE7 350 aa17.34■□□□□ 0.37
FDFT1-204ENST00000525283 EYA1Q99502 592 aa17.33■□□□□ 0.36
FDFT1-204ENST00000525283 ATP10DQ9P241 1426 aa17.32■□□□□ 0.36
FDFT1-204ENST00000525283 CLSPNQ9HAW4 1339 aa17.32■□□□□ 0.36
FDFT1-204ENST00000525283 NKX1-1Q15270 411 aaPredicted RBP17.32■□□□□ 0.36
FDFT1-204ENST00000525283 GPBP1L1Q9HC44 474 aaPredicted RBP17.32■□□□□ 0.36
FDFT1-204ENST00000525283 PLEKHG2Q9H7P9 1386 aa17.31■□□□□ 0.36
FDFT1-204ENST00000525283 IGSF1Q8N6C5 1336 aa17.31■□□□□ 0.36
FDFT1-204ENST00000525283 HSP90AB1P08238 724 aaKnown RBP17.31■□□□□ 0.36
FDFT1-204ENST00000525283 PHKG2P15735 406 aa17.31■□□□□ 0.36
FDFT1-204ENST00000525283 COL5A3P25940 1745 aaPredicted RBP17.3■□□□□ 0.36
FDFT1-204ENST00000525283 ZNF831Q5JPB2 1677 aa17.3■□□□□ 0.36
FDFT1-204ENST00000525283 WWC3Q9ULE0 1092 aa17.3■□□□□ 0.36
FDFT1-204ENST00000525283 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
FDFT1-204ENST00000525283 EIF4A2Q14240 407 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms