RNA–Protein interactions for RNA: ENST00000525275.5

SHARPIN-203, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 3

Gene SHARPIN, Length 521 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-203ENST00000525275 NUDCQ9Y266 331 aa24.61■■□□□ 1.53
SHARPIN-203ENST00000525275 U2SURPO15042 1029 aaKnown RBP24.6■■□□□ 1.53
SHARPIN-203ENST00000525275 AEBP1Q8IUX7 1158 aa24.6■■□□□ 1.53
SHARPIN-203ENST00000525275 DDX54Q8TDD1 881 aaKnown RBP24.6■■□□□ 1.53
SHARPIN-203ENST00000525275 UPF1Q92900 1129 aaKnown RBP eCLIP24.6■■□□□ 1.53
SHARPIN-203ENST00000525275 KDRP35968 1356 aa24.59■■□□□ 1.53
SHARPIN-203ENST00000525275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.58■■□□□ 1.53
SHARPIN-203ENST00000525275 SPG7Q9UQ90 795 aa24.58■■□□□ 1.53
SHARPIN-203ENST00000525275 PLEKHG2Q9H7P9 1386 aa24.57■■□□□ 1.52
SHARPIN-203ENST00000525275 ANP32CO43423 234 aa24.57■■□□□ 1.52
SHARPIN-203ENST00000525275 HMOX1P09601 288 aa24.57■■□□□ 1.52
SHARPIN-203ENST00000525275 CCDC125Q86Z20 511 aa24.57■■□□□ 1.52
SHARPIN-203ENST00000525275 BCL9O00512 1426 aa24.55■■□□□ 1.52
SHARPIN-203ENST00000525275 PCDH11XQ9BZA7 1347 aa24.55■■□□□ 1.52
SHARPIN-203ENST00000525275 PCDH11YQ9BZA8 1340 aa24.55■■□□□ 1.52
SHARPIN-203ENST00000525275 PLEKHO1Q53GL0 409 aaPredicted RBP24.54■■□□□ 1.52
SHARPIN-203ENST00000525275 PKD1L3Q7Z443 1732 aa24.54■■□□□ 1.52
SHARPIN-203ENST00000525275 SHANK3Q9BYB0 1731 aa24.54■■□□□ 1.52
SHARPIN-203ENST00000525275 EP400Q96L91 3159 aa24.53■■□□□ 1.52
SHARPIN-203ENST00000525275 U2AF1L5P0DN76 240 aaPredicted RBP24.53■■□□□ 1.52
SHARPIN-203ENST00000525275 U2AF1Q01081 240 aaKnown RBP eCLIP24.53■■□□□ 1.52
SHARPIN-203ENST00000525275 AMOTQ4VCS5 1084 aa24.53■■□□□ 1.52
SHARPIN-203ENST00000525275 CYP27B1O15528 508 aa24.51■■□□□ 1.51
SHARPIN-203ENST00000525275 TRIM37O94972 964 aa24.51■■□□□ 1.51
SHARPIN-203ENST00000525275 SF3B2Q13435 895 aaKnown RBP24.51■■□□□ 1.51
SHARPIN-203ENST00000525275 IFNL2Q8IZJ0 200 aa24.49■■□□□ 1.51
SHARPIN-203ENST00000525275 SBF2Q86WG5 1849 aa24.49■■□□□ 1.51
SHARPIN-203ENST00000525275 FCHSD2O94868 740 aa24.48■■□□□ 1.51
SHARPIN-203ENST00000525275 PHKG2P15735 406 aa24.46■■□□□ 1.51
SHARPIN-203ENST00000525275 NKX1-1Q15270 411 aaPredicted RBP24.46■■□□□ 1.51
SHARPIN-203ENST00000525275 ZNF530Q6P9A1 599 aaPredicted RBP24.46■■□□□ 1.51
SHARPIN-203ENST00000525275 ACSBG1Q96GR2 724 aa24.46■■□□□ 1.51
SHARPIN-203ENST00000525275 BCL11BQ9C0K0 894 aaPredicted RBP24.46■■□□□ 1.51
SHARPIN-203ENST00000525275 RSPH6AQ9H0K4 717 aa24.46■■□□□ 1.51
SHARPIN-203ENST00000525275 PRKAR2BP31323 418 aa24.45■■□□□ 1.5
SHARPIN-203ENST00000525275 KAT6BQ8WYB5 2073 aa24.45■■□□□ 1.5
SHARPIN-203ENST00000525275 C1orf141Q5JVX7 400 aa24.44■■□□□ 1.5
SHARPIN-203ENST00000525275 KCNQ2O43526 872 aa24.43■■□□□ 1.5
SHARPIN-203ENST00000525275 APBA3O96018 575 aa24.43■■□□□ 1.5
SHARPIN-203ENST00000525275 TNS1Q9HBL0 1735 aaKnown RBP24.42■■□□□ 1.5
SHARPIN-203ENST00000525275 HSP90AB1P08238 724 aaKnown RBP24.42■■□□□ 1.5
SHARPIN-203ENST00000525275 BAG6P46379 1132 aa24.42■■□□□ 1.5
SHARPIN-203ENST00000525275 PNNQ9H307 717 aaKnown RBP24.42■■□□□ 1.5
SHARPIN-203ENST00000525275 WDR43Q15061 677 aaKnown RBP eCLIP24.41■■□□□ 1.5
SHARPIN-203ENST00000525275 MTHFSDQ2M296 383 aaKnown RBP24.41■■□□□ 1.5
SHARPIN-203ENST00000525275 PTF1AQ7RTS3 328 aa24.41■■□□□ 1.5
SHARPIN-203ENST00000525275 NHSQ6T4R5 1651 aa24.4■■□□□ 1.5
SHARPIN-203ENST00000525275 PRIM1P49642 420 aaKnown RBP24.4■■□□□ 1.5
SHARPIN-203ENST00000525275 AKAP4Q5JQC9 854 aa24.4■■□□□ 1.5
SHARPIN-203ENST00000525275 PHACTR3Q96KR7 559 aa24.4■■□□□ 1.5
SHARPIN-203ENST00000525275 DOT1LQ8TEK3 1739 aa24.4■■□□□ 1.5
SHARPIN-203ENST00000525275 DEFB132Q7Z7B7 95 aa24.39■■□□□ 1.49
SHARPIN-203ENST00000525275 GAS2L2Q8NHY3 880 aa24.39■■□□□ 1.49
SHARPIN-203ENST00000525275 SYTL4Q96C24 671 aaPredicted RBP24.39■■□□□ 1.49
SHARPIN-203ENST00000525275 DCAF5Q96JK2 942 aa24.39■■□□□ 1.49
SHARPIN-203ENST00000525275 NEFMP07197 916 aa24.38■■□□□ 1.49
SHARPIN-203ENST00000525275 CCDC184Q52MB2 194 aa24.37■■□□□ 1.49
SHARPIN-203ENST00000525275 EN1Q05925 392 aaPredicted RBP24.36■■□□□ 1.49
SHARPIN-203ENST00000525275 PLEKHF1Q96S99 279 aa24.36■■□□□ 1.49
SHARPIN-203ENST00000525275 PLSCR1O15162 318 aa24.35■■□□□ 1.49
SHARPIN-203ENST00000525275 DIEXFQ68CQ4 756 aaKnown RBP24.34■■□□□ 1.49
SHARPIN-203ENST00000525275 MPRIPQ6WCQ1 1025 aa24.34■■□□□ 1.49
SHARPIN-203ENST00000525275 MRS2Q9HD23 443 aa24.34■■□□□ 1.49
SHARPIN-203ENST00000525275 ADAMTS8Q9UP79 889 aa24.34■■□□□ 1.49
SHARPIN-203ENST00000525275 TOGARAM1Q9Y4F4 1720 aa24.34■■□□□ 1.49
SHARPIN-203ENST00000525275 ERVV-2B6SEH9 535 aa24.33■■□□□ 1.49
SHARPIN-203ENST00000525275 CAMKK2Q96RR4 588 aa24.33■■□□□ 1.49
SHARPIN-203ENST00000525275 BTAF1O14981 1849 aa24.33■■□□□ 1.48
SHARPIN-203ENST00000525275 GNAT3A8MTJ3 354 aa24.32■■□□□ 1.48
SHARPIN-203ENST00000525275 ITGB4P16144 1822 aa24.32■■□□□ 1.48
SHARPIN-203ENST00000525275 KDM6AO15550 1401 aaPredicted RBP24.32■■□□□ 1.48
SHARPIN-203ENST00000525275 MAPK8IP3Q9UPT6 1336 aa24.32■■□□□ 1.48
SHARPIN-203ENST00000525275 EZH2Q15910 746 aaKnown RBP24.31■■□□□ 1.48
SHARPIN-203ENST00000525275 TMOD3Q9NYL9 352 aa24.31■■□□□ 1.48
SHARPIN-203ENST00000525275 MAP3K5Q99683 1374 aa24.3■■□□□ 1.48
SHARPIN-203ENST00000525275 PIGBQ92521 554 aa24.3■■□□□ 1.48
SHARPIN-203ENST00000525275 RNMTO43148 476 aaKnown RBP24.29■■□□□ 1.48
SHARPIN-203ENST00000525275 LGR6Q9HBX8 967 aa24.29■■□□□ 1.48
SHARPIN-203ENST00000525275 CABP4P57796 275 aa24.28■■□□□ 1.48
SHARPIN-203ENST00000525275 PNISRQ8TF01 805 aaKnown RBP24.28■■□□□ 1.48
SHARPIN-203ENST00000525275 RGPD3A6NKT7 1758 aaPredicted RBP24.28■■□□□ 1.48
SHARPIN-203ENST00000525275 RGPD4Q7Z3J3 1758 aa24.28■■□□□ 1.48
SHARPIN-203ENST00000525275 SCN11AQ9UI33 1791 aa24.28■■□□□ 1.48
SHARPIN-203ENST00000525275 NFE2L2Q16236 605 aa24.27■■□□□ 1.48
SHARPIN-203ENST00000525275 RUNDC1Q96C34 613 aa24.27■■□□□ 1.48
SHARPIN-203ENST00000525275 CCDC146Q8IYE0 955 aa24.26■■□□□ 1.47
SHARPIN-203ENST00000525275 HTATSF1O43719 755 aaKnown RBP24.25■■□□□ 1.47
SHARPIN-203ENST00000525275 NFATC2IPQ8NCF5 419 aa24.25■■□□□ 1.47
SHARPIN-203ENST00000525275 IL17REQ8NFR9 667 aa24.25■■□□□ 1.47
SHARPIN-203ENST00000525275 RTF1Q92541 710 aaKnown RBP24.25■■□□□ 1.47
SHARPIN-203ENST00000525275 ADAMTS7Q9UKP4 1686 aa24.24■■□□□ 1.47
SHARPIN-203ENST00000525275 VIRMAQ69YN4 1812 aaKnown RBP24.24■■□□□ 1.47
SHARPIN-203ENST00000525275 TXNRD1Q16881 649 aa24.24■■□□□ 1.47
SHARPIN-203ENST00000525275 PROM2Q8N271 834 aa24.24■■□□□ 1.47
SHARPIN-203ENST00000525275 SMARCC1Q92922 1105 aaPredicted RBP24.24■■□□□ 1.47
SHARPIN-203ENST00000525275 SLC52A2Q9HAB3 445 aa24.24■■□□□ 1.47
SHARPIN-203ENST00000525275 TEFQ10587 303 aa24.21■■□□□ 1.47
SHARPIN-203ENST00000525275 ATG3Q9NT62 314 aa24.21■■□□□ 1.47
SHARPIN-203ENST00000525275 ASAP1Q9ULH1 1129 aa24.21■■□□□ 1.47
SHARPIN-203ENST00000525275 MRC1P22897 1456 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms