RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 FOXD4L3Q6VB84 417 aaPredicted RBP6.03□□□□□ -1.44
CD44-213ENST00000525209 EYA1Q99502 592 aa6.03□□□□□ -1.44
CD44-213ENST00000525209 TGIF2Q9GZN2 237 aa6.03□□□□□ -1.44
CD44-213ENST00000525209 HMX1Q9NP08 348 aaPredicted RBP6.03□□□□□ -1.44
CD44-213ENST00000525209 EGFL7Q9UHF1 273 aa6.03□□□□□ -1.44
CD44-213ENST00000525209 COL4A3BPQ9Y5P4 624 aa6.03□□□□□ -1.44
CD44-213ENST00000525209 FAM196BA6NMK8 535 aa6.02□□□□□ -1.45
CD44-213ENST00000525209 PLEKHG6Q3KR16 790 aa6.02□□□□□ -1.45
CD44-213ENST00000525209 LONRF3Q496Y0 759 aa6.02□□□□□ -1.45
CD44-213ENST00000525209 SOGA3Q5TF21 947 aa6.02□□□□□ -1.45
CD44-213ENST00000525209 JAZF1Q86VZ6 243 aa6.02□□□□□ -1.45
CD44-213ENST00000525209 ZSCAN29Q8IWY8 852 aaPredicted RBP6.02□□□□□ -1.45
CD44-213ENST00000525209 CCAR1Q8IX12 1150 aaKnown RBP6.02□□□□□ -1.45
CD44-213ENST00000525209 C1orf216Q8TAB5 229 aa6.02□□□□□ -1.45
CD44-213ENST00000525209 PMFBP1Q8TBY8 1022 aa6.02□□□□□ -1.45
CD44-213ENST00000525209 PXYLP1Q8TE99 480 aa6.02□□□□□ -1.45
CD44-213ENST00000525209 IRF2BPLQ9H1B7 796 aa6.02□□□□□ -1.45
CD44-213ENST00000525209 CAPN10Q9HC96 672 aa6.02□□□□□ -1.45
CD44-213ENST00000525209 GABBR1Q9UBS5 961 aa6.02□□□□□ -1.45
CD44-213ENST00000525209 PCDHB15Q9Y5E8 787 aa6.02□□□□□ -1.45
CD44-213ENST00000525209 MOXD2PA6NHM9 499 aa6.01□□□□□ -1.45
CD44-213ENST00000525209 NUTM2BA6NNL0 878 aaPredicted RBP6.01□□□□□ -1.45
CD44-213ENST00000525209 NUTM2EB1AL46 878 aaPredicted RBP6.01□□□□□ -1.45
CD44-213ENST00000525209 MAPK1P28482 360 aa6.01□□□□□ -1.45
CD44-213ENST00000525209 HDGFP51858 240 aaKnown RBP6.01□□□□□ -1.45
CD44-213ENST00000525209 TJAP1Q5JTD0 557 aa6.01□□□□□ -1.45
CD44-213ENST00000525209 NUTM2DQ5VT03 806 aaPredicted RBP6.01□□□□□ -1.45
CD44-213ENST00000525209 NUTM2AQ8IVF1 878 aaPredicted RBP6.01□□□□□ -1.45
CD44-213ENST00000525209 ZNF516Q92618 1163 aa6.01□□□□□ -1.45
CD44-213ENST00000525209 MTRQ99707 1265 aa6.01□□□□□ -1.45
CD44-213ENST00000525209 MAF1Q9H063 256 aa6.01□□□□□ -1.45
CD44-213ENST00000525209 CCSER2Q9H7U1 834 aa6.01□□□□□ -1.45
CD44-213ENST00000525209 PCDH12Q9NPG4 1184 aa6.01□□□□□ -1.45
CD44-213ENST00000525209 DCTN4Q9UJW0 460 aa6.01□□□□□ -1.45
CD44-213ENST00000525209 SCNN1AP37088 669 aa6□□□□□ -1.45
CD44-213ENST00000525209 PRPF38BQ5VTL8 546 aaKnown RBP6□□□□□ -1.45
CD44-213ENST00000525209 OSBPL2Q9H1P3 480 aa6□□□□□ -1.45
CD44-213ENST00000525209 DMGDHQ9UI17 866 aaKnown RBP6□□□□□ -1.45
CD44-213ENST00000525209 ADGRG1Q9Y653 693 aa6□□□□□ -1.45
CD44-213ENST00000525209 USP17L15C9J2P7 530 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 USP17L10C9JJH3 530 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 USP17L13C9JLJ4 530 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 USP17L12C9JPN9 530 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 USP17L11C9JVI0 530 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 USP17L21D6R901 530 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 USP17L18D6R9N7 530 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 USP17L22D6RA61 530 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 USP17L17D6RBQ6 530 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 USP17L19D6RCP7 530 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 USP17L20D6RJB6 530 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 HOXA2O43364 376 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 SH3BP5O60239 455 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 ICMTO60725 284 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 ZEB1P37275 1124 aaPredicted RBP5.99□□□□□ -1.45
CD44-213ENST00000525209 COPS2P61201 443 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 USP17L24Q0WX57 530 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 GNL2Q13823 731 aaKnown RBP5.99□□□□□ -1.45
CD44-213ENST00000525209 BMS1Q14692 1282 aaKnown RBP5.99□□□□□ -1.45
CD44-213ENST00000525209 CRTC2Q53ET0 693 aaPredicted RBP5.99□□□□□ -1.45
CD44-213ENST00000525209 ZFYVE27Q5T4F4 411 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 PPP1R18Q6NYC8 613 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 TSHZ1Q6ZSZ6 1077 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 CCDC146Q8IYE0 955 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 RPUSD2Q8IZ73 545 aaKnown RBP5.99□□□□□ -1.45
CD44-213ENST00000525209 TMEM87AQ8NBN3 555 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 NFATC2IPQ8NCF5 419 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 FAM200AQ8TCP9 573 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 CABLES1Q8TDN4 633 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 METTL5Q9NRN9 209 aaKnown RBP5.99□□□□□ -1.45
CD44-213ENST00000525209 IFT57Q9NWB7 429 aa5.99□□□□□ -1.45
CD44-213ENST00000525209 USP17L3A6NCW0 530 aa5.98□□□□□ -1.45
CD44-213ENST00000525209 USP17L4A6NCW7 530 aa5.98□□□□□ -1.45
CD44-213ENST00000525209 H3BRB1 525 aa5.98□□□□□ -1.45
CD44-213ENST00000525209 NDUFV2P19404 249 aa5.98□□□□□ -1.45
CD44-213ENST00000525209 PAX3P23760 479 aa5.98□□□□□ -1.45
CD44-213ENST00000525209 DNAJA1P31689 397 aaKnown RBP5.98□□□□□ -1.45
CD44-213ENST00000525209 CTDSPL2Q05D32 466 aa5.98□□□□□ -1.45
CD44-213ENST00000525209 C4orf46Q504U0 113 aa5.98□□□□□ -1.45
CD44-213ENST00000525209 USP17L2Q6R6M4 530 aa5.98□□□□□ -1.45
CD44-213ENST00000525209 USP17L1Q7RTZ2 530 aa5.98□□□□□ -1.45
CD44-213ENST00000525209 PLEKHM2Q8IWE5 1019 aa5.98□□□□□ -1.45
CD44-213ENST00000525209 RNF34Q969K3 372 aa5.98□□□□□ -1.45
CD44-213ENST00000525209 ACBD3Q9H3P7 528 aa5.98□□□□□ -1.45
CD44-213ENST00000525209 TUT1Q9H6E5 874 aaKnown RBP5.98□□□□□ -1.45
CD44-213ENST00000525209 RCCD1A6NED2 376 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 CD46P15529 392 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 RHBDL3P58872 404 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 EIF4G2P78344 907 aaKnown RBP eCLIP5.97□□□□□ -1.45
CD44-213ENST00000525209 FANCCQ00597 558 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 PTK7Q13308 1070 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 SWI5Q1ZZU3 235 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 CLEC4GQ6UXB4 293 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 FILIP1Q7Z7B0 1213 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 NUTM1Q86Y26 1132 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 SLF2Q8IX21 1173 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 RGL4Q8IZJ4 473 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 NKX2-3Q8TAU0 364 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 IL21Q9HBE4 155 aa5.97□□□□□ -1.45
CD44-213ENST00000525209 DDX56Q9NY93 547 aaKnown RBP5.97□□□□□ -1.45
CD44-213ENST00000525209 PNMA2Q9UL42 364 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms