RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 KAT6BQ8WYB5 2073 aa24.01■■□□□ 1.43
TSKU-202ENST00000525167 FYB1O15117 783 aa24■■□□□ 1.43
TSKU-202ENST00000525167 CDCA8Q53HL2 280 aa24■■□□□ 1.43
TSKU-202ENST00000525167 PRIM1P49642 420 aaKnown RBP23.99■■□□□ 1.43
TSKU-202ENST00000525167 NSD2O96028 1365 aa23.99■■□□□ 1.43
TSKU-202ENST00000525167 KIF24Q5T7B8 1368 aa23.99■■□□□ 1.43
TSKU-202ENST00000525167 FBLN1P23142 703 aa23.98■■□□□ 1.43
TSKU-202ENST00000525167 SYTL4Q96C24 671 aaPredicted RBP23.98■■□□□ 1.43
TSKU-202ENST00000525167 LY75O60449 1722 aa23.98■■□□□ 1.43
TSKU-202ENST00000525167 RGPD2P0DJD1 1756 aa23.98■■□□□ 1.43
TSKU-202ENST00000525167 COL24A1Q17RW2 1714 aa23.97■■□□□ 1.43
TSKU-202ENST00000525167 RRS1Q15050 365 aaKnown RBP23.96■■□□□ 1.43
TSKU-202ENST00000525167 NBPF6Q5VWK0 638 aa23.96■■□□□ 1.43
TSKU-202ENST00000525167 NBPF4Q96M43 638 aa23.96■■□□□ 1.43
TSKU-202ENST00000525167 GGNBP2Q9H3C7 697 aa23.96■■□□□ 1.43
TSKU-202ENST00000525167 INSRP06213 1382 aa23.95■■□□□ 1.42
TSKU-202ENST00000525167 PNPLA7Q6ZV29 1317 aa23.95■■□□□ 1.42
TSKU-202ENST00000525167 RAPGEF4Q8WZA2 1011 aa23.95■■□□□ 1.42
TSKU-202ENST00000525167 KIF20BQ96Q89 1820 aa23.94■■□□□ 1.42
TSKU-202ENST00000525167 UTRNP46939 3433 aa23.94■■□□□ 1.42
TSKU-202ENST00000525167 TFCP2L1Q9NZI6 479 aa23.94■■□□□ 1.42
TSKU-202ENST00000525167 FLT4P35916 1363 aa23.93■■□□□ 1.42
TSKU-202ENST00000525167 HMGB2P26583 209 aaKnown RBP23.93■■□□□ 1.42
TSKU-202ENST00000525167 POLD1P28340 1107 aa23.93■■□□□ 1.42
TSKU-202ENST00000525167 TRIM26Q12899 539 aaPredicted RBP23.93■■□□□ 1.42
TSKU-202ENST00000525167 TATP17735 454 aaPredicted RBP23.91■■□□□ 1.42
TSKU-202ENST00000525167 CCNL1Q9UK58 526 aaPredicted RBP23.91■■□□□ 1.42
TSKU-202ENST00000525167 TUBGCP6Q96RT7 1819 aa23.91■■□□□ 1.42
TSKU-202ENST00000525167 PCDH11XQ9BZA7 1347 aa23.9■■□□□ 1.42
TSKU-202ENST00000525167 PCDH11YQ9BZA8 1340 aa23.9■■□□□ 1.42
TSKU-202ENST00000525167 CHD4Q14839 1912 aa23.89■■□□□ 1.42
TSKU-202ENST00000525167 ZNF784Q8NCA9 323 aaPredicted RBP23.89■■□□□ 1.41
TSKU-202ENST00000525167 HSP90AB2PQ58FF8 381 aa23.88■■□□□ 1.41
TSKU-202ENST00000525167 USHBP1Q8N6Y0 703 aa23.88■■□□□ 1.41
TSKU-202ENST00000525167 TIMELESSQ9UNS1 1208 aa23.88■■□□□ 1.41
TSKU-202ENST00000525167 KCNQ4P56696 695 aa23.87■■□□□ 1.41
TSKU-202ENST00000525167 NSD3Q9BZ95 1437 aa23.84■■□□□ 1.41
TSKU-202ENST00000525167 CARD14Q9BXL6 1004 aa23.84■■□□□ 1.41
TSKU-202ENST00000525167 NCAPD2Q15021 1401 aa23.84■■□□□ 1.41
TSKU-202ENST00000525167 GPR162Q16538 588 aa23.83■■□□□ 1.41
TSKU-202ENST00000525167 PKD1L3Q7Z443 1732 aa23.82■■□□□ 1.4
TSKU-202ENST00000525167 ANKRD26Q9UPS8 1709 aa23.82■■□□□ 1.4
TSKU-202ENST00000525167 C5P01031 1676 aa23.82■■□□□ 1.4
TSKU-202ENST00000525167 PALLDQ8WX93 1383 aa23.8■■□□□ 1.4
TSKU-202ENST00000525167 CYP27B1O15528 508 aa23.8■■□□□ 1.4
TSKU-202ENST00000525167 KLHL34Q8N239 644 aa23.8■■□□□ 1.4
TSKU-202ENST00000525167 FLAD1Q8NFF5 587 aa23.8■■□□□ 1.4
TSKU-202ENST00000525167 EMILIN1Q9Y6C2 1016 aa23.8■■□□□ 1.4
TSKU-202ENST00000525167 COL23A1Q86Y22 540 aaPredicted RBP23.79■■□□□ 1.4
TSKU-202ENST00000525167 SMARCC1Q92922 1105 aaPredicted RBP23.79■■□□□ 1.4
TSKU-202ENST00000525167 MSH5O43196 834 aa23.78■■□□□ 1.4
TSKU-202ENST00000525167 WASHC2AQ641Q2 1341 aa23.78■■□□□ 1.4
TSKU-202ENST00000525167 CLSPNQ9HAW4 1339 aa23.78■■□□□ 1.4
TSKU-202ENST00000525167 MPRIPQ6WCQ1 1025 aa23.77■■□□□ 1.4
TSKU-202ENST00000525167 TOGARAM1Q9Y4F4 1720 aa23.76■■□□□ 1.39
TSKU-202ENST00000525167 TAF1LQ8IZX4 1826 aa23.76■■□□□ 1.39
TSKU-202ENST00000525167 NKX1-1Q15270 411 aaPredicted RBP23.76■■□□□ 1.39
TSKU-202ENST00000525167 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.76■■□□□ 1.39
TSKU-202ENST00000525167 SPG7Q9UQ90 795 aa23.76■■□□□ 1.39
TSKU-202ENST00000525167 NLGN2Q8NFZ4 835 aa23.75■■□□□ 1.39
TSKU-202ENST00000525167 ITGB4P16144 1822 aa23.74■■□□□ 1.39
TSKU-202ENST00000525167 PLEKHG2Q9H7P9 1386 aa23.74■■□□□ 1.39
TSKU-202ENST00000525167 GOLGB1Q14789 3259 aaKnown RBP23.73■■□□□ 1.39
TSKU-202ENST00000525167 C4BP0C0L5 1744 aa23.73■■□□□ 1.39
TSKU-202ENST00000525167 PPM1GO15355 546 aaPredicted RBP23.72■■□□□ 1.39
TSKU-202ENST00000525167 GRIN3BO60391 1043 aa23.72■■□□□ 1.39
TSKU-202ENST00000525167 PELP1Q8IZL8 1130 aaKnown RBP23.72■■□□□ 1.39
TSKU-202ENST00000525167 PIGBQ92521 554 aa23.7■■□□□ 1.38
TSKU-202ENST00000525167 AK7Q96M32 723 aa23.7■■□□□ 1.38
TSKU-202ENST00000525167 EYA1Q99502 592 aa23.7■■□□□ 1.38
TSKU-202ENST00000525167 CD2APQ9Y5K6 639 aa23.7■■□□□ 1.38
TSKU-202ENST00000525167 MAP2P11137 1827 aaKnown RBP23.69■■□□□ 1.38
TSKU-202ENST00000525167 MSL1Q68DK7 614 aa23.69■■□□□ 1.38
TSKU-202ENST00000525167 POLKQ9UBT6 870 aa23.69■■□□□ 1.38
TSKU-202ENST00000525167 C1QTNF8P60827 252 aa23.68■■□□□ 1.38
TSKU-202ENST00000525167 YBX3P16989 372 aaKnown RBP eCLIP23.66■■□□□ 1.38
TSKU-202ENST00000525167 IFNL2Q8IZJ0 200 aa23.66■■□□□ 1.38
TSKU-202ENST00000525167 TMOD3Q9NYL9 352 aa23.66■■□□□ 1.38
TSKU-202ENST00000525167 UBR3Q6ZT12 1888 aa23.66■■□□□ 1.38
TSKU-202ENST00000525167 LOC102724428A0A0B4J2F2 783 aa23.65■■□□□ 1.38
TSKU-202ENST00000525167 SSFA2P28290 1259 aa23.65■■□□□ 1.38
TSKU-202ENST00000525167 SIK1P57059 783 aa23.65■■□□□ 1.38
TSKU-202ENST00000525167 PHKG2P15735 406 aa23.64■■□□□ 1.37
TSKU-202ENST00000525167 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.63■■□□□ 1.37
TSKU-202ENST00000525167 GIGYF1O75420 1035 aaPredicted RBP23.62■■□□□ 1.37
TSKU-202ENST00000525167 EIF4A2Q14240 407 aaKnown RBP23.62■■□□□ 1.37
TSKU-202ENST00000525167 IGSF1Q8N6C5 1336 aa23.6■■□□□ 1.37
TSKU-202ENST00000525167 AMIGO3Q86WK7 504 aa23.6■■□□□ 1.37
TSKU-202ENST00000525167 LINC00116Q8NCU8 138 aa23.6■■□□□ 1.37
TSKU-202ENST00000525167 SENP3-EIF4A1A0A087X0R7 540 aa23.59■■□□□ 1.37
TSKU-202ENST00000525167 PHF14O94880 888 aa23.59■■□□□ 1.37
TSKU-202ENST00000525167 EIF4G2P78344 907 aaKnown RBP eCLIP23.59■■□□□ 1.37
TSKU-202ENST00000525167 POLR3GLQ9BT43 218 aa23.59■■□□□ 1.37
TSKU-202ENST00000525167 ASAP1Q9ULH1 1129 aa23.59■■□□□ 1.37
TSKU-202ENST00000525167 ZNF831Q5JPB2 1677 aa23.57■■□□□ 1.36
TSKU-202ENST00000525167 HSP90AB1P08238 724 aaKnown RBP23.57■■□□□ 1.36
TSKU-202ENST00000525167 ATP6V1AP38606 617 aa23.57■■□□□ 1.36
TSKU-202ENST00000525167 ERVV-2B6SEH9 535 aa23.56■■□□□ 1.36
TSKU-202ENST00000525167 GNPATO15228 680 aa23.56■■□□□ 1.36
TSKU-202ENST00000525167 TNNT2P45379 298 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms