RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 ATAD2Q6PL18 1390 aa10.43□□□□□ -0.74
CASP4-205ENST00000525116 ROBO2Q9HCK4 1378 aa10.43□□□□□ -0.74
CASP4-205ENST00000525116 RSPH6AQ9H0K4 717 aa10.43□□□□□ -0.74
CASP4-205ENST00000525116 FAM217BQ9NTX9 383 aaPredicted RBP10.43□□□□□ -0.74
CASP4-205ENST00000525116 TRPC5Q9UL62 973 aaPredicted RBP10.43□□□□□ -0.74
CASP4-205ENST00000525116 SOS2Q07890 1332 aaPredicted RBP10.42□□□□□ -0.74
CASP4-205ENST00000525116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.41□□□□□ -0.74
CASP4-205ENST00000525116 NBPF26B4DH59 902 aa10.41□□□□□ -0.74
CASP4-205ENST00000525116 COL9A1P20849 921 aa10.41□□□□□ -0.74
CASP4-205ENST00000525116 XPCQ01831 940 aaPredicted RBP10.41□□□□□ -0.74
CASP4-205ENST00000525116 ESCO1Q5FWF5 840 aa10.41□□□□□ -0.74
CASP4-205ENST00000525116 BEGAINQ9BUH8 593 aa10.41□□□□□ -0.74
CASP4-205ENST00000525116 KIF1BO60333 1816 aa10.4□□□□□ -0.74
CASP4-205ENST00000525116 SH3D19Q5HYK7 790 aa10.4□□□□□ -0.74
CASP4-205ENST00000525116 FNBP4Q8N3X1 1017 aaPredicted RBP10.4□□□□□ -0.74
CASP4-205ENST00000525116 FOXO3O43524 673 aa10.39□□□□□ -0.75
CASP4-205ENST00000525116 PACS2Q86VP3 889 aa10.39□□□□□ -0.75
CASP4-205ENST00000525116 NLRP7Q8WX94 980 aa10.39□□□□□ -0.75
CASP4-205ENST00000525116 STK26Q9P289 416 aa10.39□□□□□ -0.75
CASP4-205ENST00000525116 PTCH1Q13635 1447 aa10.39□□□□□ -0.75
CASP4-205ENST00000525116 ATRNO75882 1429 aa10.38□□□□□ -0.75
CASP4-205ENST00000525116 EP400Q96L91 3159 aa10.38□□□□□ -0.75
CASP4-205ENST00000525116 LAMC1P11047 1609 aa10.37□□□□□ -0.75
CASP4-205ENST00000525116 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
CASP4-205ENST00000525116 DIXDC1Q155Q3 683 aa10.37□□□□□ -0.75
CASP4-205ENST00000525116 WAPLQ7Z5K2 1190 aa10.37□□□□□ -0.75
CASP4-205ENST00000525116 KCNK17Q96T54 332 aa10.37□□□□□ -0.75
CASP4-205ENST00000525116 RPGRIP1LQ68CZ1 1315 aa10.36□□□□□ -0.75
CASP4-205ENST00000525116 NPHP3Q7Z494 1330 aa10.36□□□□□ -0.75
CASP4-205ENST00000525116 HFM1A2PYH4 1435 aa10.36□□□□□ -0.75
CASP4-205ENST00000525116 NAIPQ13075 1403 aa10.36□□□□□ -0.75
CASP4-205ENST00000525116 RCCD1A6NED2 376 aa10.36□□□□□ -0.75
CASP4-205ENST00000525116 FLIIQ13045 1269 aa10.36□□□□□ -0.75
CASP4-205ENST00000525116 GJD4Q96KN9 370 aaPredicted RBP10.36□□□□□ -0.75
CASP4-205ENST00000525116 TSKSQ9UJT2 592 aa10.36□□□□□ -0.75
CASP4-205ENST00000525116 DNAJB2P25686 324 aa10.35□□□□□ -0.75
CASP4-205ENST00000525116 SKIV2LQ15477 1246 aaKnown RBP10.35□□□□□ -0.75
CASP4-205ENST00000525116 RGL3Q3MIN7 710 aa10.35□□□□□ -0.75
CASP4-205ENST00000525116 NUDT18Q6ZVK8 323 aa10.35□□□□□ -0.75
CASP4-205ENST00000525116 SULF1Q8IWU6 871 aa10.35□□□□□ -0.75
CASP4-205ENST00000525116 FAM198AQ9UFP1 575 aa10.35□□□□□ -0.75
CASP4-205ENST00000525116 PNMA3Q9UL41 463 aa10.35□□□□□ -0.75
CASP4-205ENST00000525116 COL22A1Q8NFW1 1626 aaPredicted RBP10.35□□□□□ -0.75
CASP4-205ENST00000525116 BCL9LQ86UU0 1499 aa10.35□□□□□ -0.75
CASP4-205ENST00000525116 TMEM132EQ6IEE7 984 aa10.34□□□□□ -0.75
CASP4-205ENST00000525116 CCDC125Q86Z20 511 aa10.34□□□□□ -0.75
CASP4-205ENST00000525116 OTUD5Q96G74 571 aa10.34□□□□□ -0.75
CASP4-205ENST00000525116 EYA1Q99502 592 aa10.34□□□□□ -0.75
CASP4-205ENST00000525116 MYOM2P54296 1465 aa10.34□□□□□ -0.75
CASP4-205ENST00000525116 PXDNQ92626 1479 aa10.34□□□□□ -0.75
CASP4-205ENST00000525116 ADGRF5Q8IZF2 1346 aa10.33□□□□□ -0.76
CASP4-205ENST00000525116 ONECUT3O60422 494 aaPredicted RBP10.33□□□□□ -0.76
CASP4-205ENST00000525116 TATDN2Q93075 761 aa10.33□□□□□ -0.76
CASP4-205ENST00000525116 PPLO60437 1756 aa10.32□□□□□ -0.76
CASP4-205ENST00000525116 LRPPRCP42704 1394 aaKnown RBP10.32□□□□□ -0.76
CASP4-205ENST00000525116 KRT28Q7Z3Y7 464 aa10.32□□□□□ -0.76
CASP4-205ENST00000525116 UNC5CLQ8IV45 518 aa10.32□□□□□ -0.76
CASP4-205ENST00000525116 CDC42BPGQ6DT37 1551 aa10.31□□□□□ -0.76
CASP4-205ENST00000525116 PLEKHH1Q9ULM0 1364 aa10.31□□□□□ -0.76
CASP4-205ENST00000525116 MARF1Q9Y4F3 1742 aaKnown RBP10.31□□□□□ -0.76
CASP4-205ENST00000525116 DEFB132Q7Z7B7 95 aa10.31□□□□□ -0.76
CASP4-205ENST00000525116 CABLES1Q8TDN4 633 aa10.31□□□□□ -0.76
CASP4-205ENST00000525116 ZMYND15Q9H091 742 aa10.31□□□□□ -0.76
CASP4-205ENST00000525116 CCDC9Q9Y3X0 531 aaKnown RBP10.31□□□□□ -0.76
CASP4-205ENST00000525116 PRAG1Q86YV5 1406 aa10.31□□□□□ -0.76
CASP4-205ENST00000525116 ERBB3P21860 1342 aa10.31□□□□□ -0.76
CASP4-205ENST00000525116 RRBP1Q9P2E9 1410 aaKnown RBP10.3□□□□□ -0.76
CASP4-205ENST00000525116 SPATA31A3Q5VYP0 1347 aa10.3□□□□□ -0.76
CASP4-205ENST00000525116 RALGAPBQ86X10 1494 aa10.3□□□□□ -0.76
CASP4-205ENST00000525116 SF3B2Q13435 895 aaKnown RBP10.29□□□□□ -0.76
CASP4-205ENST00000525116 PROX2Q3B8N5 592 aa10.29□□□□□ -0.76
CASP4-205ENST00000525116 MYSM1Q5VVJ2 828 aa10.29□□□□□ -0.76
CASP4-205ENST00000525116 SEPT12Q8IYM1 358 aa10.29□□□□□ -0.76
CASP4-205ENST00000525116 TBC1D2Q9BYX2 928 aa10.29□□□□□ -0.76
CASP4-205ENST00000525116 TMEM134Q9H6X4 195 aa10.29□□□□□ -0.76
CASP4-205ENST00000525116 POLR3EQ9NVU0 708 aa10.29□□□□□ -0.76
CASP4-205ENST00000525116 GLI3P10071 1580 aa10.28□□□□□ -0.76
CASP4-205ENST00000525116 BLMP54132 1417 aaPredicted RBP10.28□□□□□ -0.76
CASP4-205ENST00000525116 DDX11L8A8MPP1 907 aa10.28□□□□□ -0.76
CASP4-205ENST00000525116 CLK2P49760 499 aaKnown RBP10.28□□□□□ -0.76
CASP4-205ENST00000525116 LHX8Q68G74 356 aa10.28□□□□□ -0.76
CASP4-205ENST00000525116 CCDC144AA2RUR9 1427 aa10.27□□□□□ -0.77
CASP4-205ENST00000525116 A0A0G2JS52 829 aa10.27□□□□□ -0.77
CASP4-205ENST00000525116 ARHGAP33O14559 1287 aa10.27□□□□□ -0.77
CASP4-205ENST00000525116 CD46P15529 392 aa10.27□□□□□ -0.77
CASP4-205ENST00000525116 MYT1Q01538 1121 aa10.27□□□□□ -0.77
CASP4-205ENST00000525116 PSME1Q06323 249 aa10.27□□□□□ -0.77
CASP4-205ENST00000525116 SAFB2Q14151 953 aaKnown RBP eCLIP10.27□□□□□ -0.77
CASP4-205ENST00000525116 VARS2Q5ST30 1063 aaKnown RBP10.27□□□□□ -0.77
CASP4-205ENST00000525116 NUTM1Q86Y26 1132 aa10.27□□□□□ -0.77
CASP4-205ENST00000525116 ZBED2Q9BTP6 218 aa10.27□□□□□ -0.77
CASP4-205ENST00000525116 SLIT2O94813 1529 aa10.27□□□□□ -0.77
CASP4-205ENST00000525116 ABCC11Q96J66 1382 aa10.26□□□□□ -0.77
CASP4-205ENST00000525116 BRWD3Q6RI45 1802 aa10.26□□□□□ -0.77
CASP4-205ENST00000525116 VPS72Q15906 364 aa10.26□□□□□ -0.77
CASP4-205ENST00000525116 MPHOSPH9Q99550 1183 aa10.26□□□□□ -0.77
CASP4-205ENST00000525116 KIAA1468Q9P260 1216 aa10.26□□□□□ -0.77
CASP4-205ENST00000525116 FMN2Q9NZ56 1722 aa10.26□□□□□ -0.77
CASP4-205ENST00000525116 ANKRD30BQ9BXX2 1392 aa10.26□□□□□ -0.77
CASP4-205ENST00000525116 TECPR2O15040 1411 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms