RNA–Protein interactions for RNA: ENST00000525045.5

PABPC4-219, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-219ENST00000525045 TESK2Q96S53 571 aa19.82■□□□□ 0.76
PABPC4-219ENST00000525045 PNPLA7Q6ZV29 1317 aa19.8■□□□□ 0.76
PABPC4-219ENST00000525045 QSER1Q2KHR3 1735 aa19.8■□□□□ 0.76
PABPC4-219ENST00000525045 KLHL34Q8N239 644 aa19.8■□□□□ 0.76
PABPC4-219ENST00000525045 RTL1A6NKG5 1358 aa19.79■□□□□ 0.76
PABPC4-219ENST00000525045 RAPGEF4Q8WZA2 1011 aa19.78■□□□□ 0.76
PABPC4-219ENST00000525045 CCNL1Q9UK58 526 aaPredicted RBP19.78■□□□□ 0.76
PABPC4-219ENST00000525045 USP47Q96K76 1375 aa19.76■□□□□ 0.75
PABPC4-219ENST00000525045 FBLN1P23142 703 aa19.76■□□□□ 0.75
PABPC4-219ENST00000525045 TMF1P82094 1093 aa19.76■□□□□ 0.75
PABPC4-219ENST00000525045 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
PABPC4-219ENST00000525045 FYB1O15117 783 aa19.75■□□□□ 0.75
PABPC4-219ENST00000525045 TATP17735 454 aaPredicted RBP19.75■□□□□ 0.75
PABPC4-219ENST00000525045 KCNQ4P56696 695 aa19.75■□□□□ 0.75
PABPC4-219ENST00000525045 C1QTNF8P60827 252 aa19.75■□□□□ 0.75
PABPC4-219ENST00000525045 CDCA8Q53HL2 280 aa19.75■□□□□ 0.75
PABPC4-219ENST00000525045 NBPF6Q5VWK0 638 aa19.75■□□□□ 0.75
PABPC4-219ENST00000525045 NBPF4Q96M43 638 aa19.75■□□□□ 0.75
PABPC4-219ENST00000525045 MSH5O43196 834 aa19.74■□□□□ 0.75
PABPC4-219ENST00000525045 GRIN3BO60391 1043 aa19.74■□□□□ 0.75
PABPC4-219ENST00000525045 RRS1Q15050 365 aaKnown RBP19.74■□□□□ 0.75
PABPC4-219ENST00000525045 PELP1Q8IZL8 1130 aaKnown RBP19.74■□□□□ 0.75
PABPC4-219ENST00000525045 LY75O60449 1722 aa19.73■□□□□ 0.75
PABPC4-219ENST00000525045 COL24A1Q17RW2 1714 aa19.73■□□□□ 0.75
PABPC4-219ENST00000525045 NSD2O96028 1365 aa19.73■□□□□ 0.75
PABPC4-219ENST00000525045 FLAD1Q8NFF5 587 aa19.73■□□□□ 0.75
PABPC4-219ENST00000525045 GGNBP2Q9H3C7 697 aa19.73■□□□□ 0.75
PABPC4-219ENST00000525045 MEGF6O75095 1541 aa19.72■□□□□ 0.75
PABPC4-219ENST00000525045 DOT1LQ8TEK3 1739 aa19.72■□□□□ 0.75
PABPC4-219ENST00000525045 RGPD2P0DJD1 1756 aa19.71■□□□□ 0.75
PABPC4-219ENST00000525045 PCDH11XQ9BZA7 1347 aa19.71■□□□□ 0.75
PABPC4-219ENST00000525045 PCDH11YQ9BZA8 1340 aa19.71■□□□□ 0.75
PABPC4-219ENST00000525045 KIF24Q5T7B8 1368 aa19.7■□□□□ 0.74
PABPC4-219ENST00000525045 SENP3-EIF4A1A0A087X0R7 540 aa19.7■□□□□ 0.74
PABPC4-219ENST00000525045 COL23A1Q86Y22 540 aaPredicted RBP19.7■□□□□ 0.74
PABPC4-219ENST00000525045 INSRP06213 1382 aa19.7■□□□□ 0.74
PABPC4-219ENST00000525045 USHBP1Q8N6Y0 703 aa19.69■□□□□ 0.74
PABPC4-219ENST00000525045 TUBGCP6Q96RT7 1819 aa19.68■□□□□ 0.74
PABPC4-219ENST00000525045 GIGYF1O75420 1035 aaPredicted RBP19.68■□□□□ 0.74
PABPC4-219ENST00000525045 HSP90AB2PQ58FF8 381 aa19.68■□□□□ 0.74
PABPC4-219ENST00000525045 NLGN2Q8NFZ4 835 aa19.68■□□□□ 0.74
PABPC4-219ENST00000525045 SMARCC1Q92922 1105 aaPredicted RBP19.68■□□□□ 0.74
PABPC4-219ENST00000525045 FLT4P35916 1363 aa19.68■□□□□ 0.74
PABPC4-219ENST00000525045 SHANK3Q9BYB0 1731 aa19.68■□□□□ 0.74
PABPC4-219ENST00000525045 UTRNP46939 3433 aa19.67■□□□□ 0.74
PABPC4-219ENST00000525045 CD2APQ9Y5K6 639 aa19.66■□□□□ 0.74
PABPC4-219ENST00000525045 MPRIPQ6WCQ1 1025 aa19.65■□□□□ 0.74
PABPC4-219ENST00000525045 PALLDQ8WX93 1383 aa19.63■□□□□ 0.73
PABPC4-219ENST00000525045 CYP27B1O15528 508 aa19.62■□□□□ 0.73
PABPC4-219ENST00000525045 MSL1Q68DK7 614 aa19.62■□□□□ 0.73
PABPC4-219ENST00000525045 YBX3P16989 372 aaKnown RBP eCLIP19.61■□□□□ 0.735e-10■□□□□ 10
PABPC4-219ENST00000525045 AK7Q96M32 723 aa19.61■□□□□ 0.73
PABPC4-219ENST00000525045 SPG7Q9UQ90 795 aa19.61■□□□□ 0.73
PABPC4-219ENST00000525045 NSD3Q9BZ95 1437 aa19.6■□□□□ 0.73
PABPC4-219ENST00000525045 NKX1-1Q15270 411 aaPredicted RBP19.6■□□□□ 0.73
PABPC4-219ENST00000525045 C5P01031 1676 aa19.59■□□□□ 0.73
PABPC4-219ENST00000525045 KIF20BQ96Q89 1820 aa19.58■□□□□ 0.73
PABPC4-219ENST00000525045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.58■□□□□ 0.726e-9■□□□□ 11.1
PABPC4-219ENST00000525045 PPM1GO15355 546 aaPredicted RBP19.57■□□□□ 0.72
PABPC4-219ENST00000525045 PIGBQ92521 554 aa19.57■□□□□ 0.72
PABPC4-219ENST00000525045 CARD14Q9BXL6 1004 aa19.57■□□□□ 0.72
PABPC4-219ENST00000525045 EMILIN1Q9Y6C2 1016 aa19.57■□□□□ 0.72
PABPC4-219ENST00000525045 TAF1LQ8IZX4 1826 aa19.57■□□□□ 0.72
PABPC4-219ENST00000525045 WASHC2AQ641Q2 1341 aa19.55■□□□□ 0.72
PABPC4-219ENST00000525045 SSFA2P28290 1259 aa19.55■□□□□ 0.72
PABPC4-219ENST00000525045 ITGB4P16144 1822 aa19.55■□□□□ 0.72
PABPC4-219ENST00000525045 LOC102724428A0A0B4J2F2 783 aa19.54■□□□□ 0.72
PABPC4-219ENST00000525045 SIK1P57059 783 aa19.54■□□□□ 0.72
PABPC4-219ENST00000525045 IFNL2Q8IZJ0 200 aa19.54■□□□□ 0.72
PABPC4-219ENST00000525045 TMOD3Q9NYL9 352 aa19.54■□□□□ 0.72
PABPC4-219ENST00000525045 TIMELESSQ9UNS1 1208 aa19.54■□□□□ 0.72
PABPC4-219ENST00000525045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.53■□□□□ 0.72
PABPC4-219ENST00000525045 EYA1Q99502 592 aa19.53■□□□□ 0.72
PABPC4-219ENST00000525045 C4BP0C0L5 1744 aa19.53■□□□□ 0.72
PABPC4-219ENST00000525045 NCAPD2Q15021 1401 aa19.52■□□□□ 0.72
PABPC4-219ENST00000525045 PHF14O94880 888 aa19.52■□□□□ 0.72
PABPC4-219ENST00000525045 GPBP1L1Q9HC44 474 aaPredicted RBP19.52■□□□□ 0.72
PABPC4-219ENST00000525045 PKD1L3Q7Z443 1732 aa19.51■□□□□ 0.71
PABPC4-219ENST00000525045 ATP10DQ9P241 1426 aa19.51■□□□□ 0.71
PABPC4-219ENST00000525045 ATP6V1AP38606 617 aa19.5■□□□□ 0.71
PABPC4-219ENST00000525045 MAP2P11137 1827 aaKnown RBP19.5■□□□□ 0.71
PABPC4-219ENST00000525045 PHKG2P15735 406 aa19.49■□□□□ 0.71
PABPC4-219ENST00000525045 TRIM26Q12899 539 aaPredicted RBP19.49■□□□□ 0.71
PABPC4-219ENST00000525045 POLKQ9UBT6 870 aa19.49■□□□□ 0.71
PABPC4-219ENST00000525045 UBR3Q6ZT12 1888 aa19.49■□□□□ 0.71
PABPC4-219ENST00000525045 IGSF1Q8N6C5 1336 aa19.49■□□□□ 0.71
PABPC4-219ENST00000525045 PLEKHG2Q9H7P9 1386 aa19.48■□□□□ 0.71
PABPC4-219ENST00000525045 GOLGB1Q14789 3259 aaKnown RBP19.48■□□□□ 0.71
PABPC4-219ENST00000525045 LINC00116Q8NCU8 138 aa19.48■□□□□ 0.71
PABPC4-219ENST00000525045 ASAP1Q9ULH1 1129 aa19.48■□□□□ 0.71
PABPC4-219ENST00000525045 TOGARAM1Q9Y4F4 1720 aa19.48■□□□□ 0.71
PABPC4-219ENST00000525045 GNPATO15228 680 aa19.47■□□□□ 0.71
PABPC4-219ENST00000525045 AMIGO3Q86WK7 504 aa19.47■□□□□ 0.71
PABPC4-219ENST00000525045 HSP90AB1P08238 724 aaKnown RBP19.46■□□□□ 0.71
PABPC4-219ENST00000525045 ERVV-2B6SEH9 535 aa19.45■□□□□ 0.7
PABPC4-219ENST00000525045 ITPK1Q13572 414 aa19.44■□□□□ 0.7
PABPC4-219ENST00000525045 TRAPPC3LQ5T215 181 aa19.44■□□□□ 0.7
PABPC4-219ENST00000525045 NLGN1Q8N2Q7 840 aa19.44■□□□□ 0.7
PABPC4-219ENST00000525045 ATG3Q9NT62 314 aa19.44■□□□□ 0.7
PABPC4-219ENST00000525045 RTCBQ9Y3I0 505 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms