RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.58
UBXN1-205ENST00000525004 RAPGEF4Q8WZA2 1011 aa18.68■□□□□ 0.58
UBXN1-205ENST00000525004 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
UBXN1-205ENST00000525004 SHANK3Q9BYB0 1731 aa18.67■□□□□ 0.58
UBXN1-205ENST00000525004 TATP17735 454 aaPredicted RBP18.67■□□□□ 0.58
UBXN1-205ENST00000525004 RXRBP28702 533 aa18.67■□□□□ 0.58
UBXN1-205ENST00000525004 FAM98CQ17RN3 349 aaKnown RBP18.67■□□□□ 0.58
UBXN1-205ENST00000525004 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
UBXN1-205ENST00000525004 LRRC37A3O60309 1634 aa18.65■□□□□ 0.58
UBXN1-205ENST00000525004 AMOTQ4VCS5 1084 aa18.64■□□□□ 0.57
UBXN1-205ENST00000525004 PHACTR3Q96KR7 559 aa18.64■□□□□ 0.57
UBXN1-205ENST00000525004 BRWD3Q6RI45 1802 aa18.64■□□□□ 0.57
UBXN1-205ENST00000525004 PLEKHO1Q53GL0 409 aaPredicted RBP18.63■□□□□ 0.57
UBXN1-205ENST00000525004 ZCRB1Q8TBF4 217 aaKnown RBP18.63■□□□□ 0.57
UBXN1-205ENST00000525004 RUNDC1Q96C34 613 aa18.63■□□□□ 0.57
UBXN1-205ENST00000525004 EXOC5O00471 708 aa18.62■□□□□ 0.57
UBXN1-205ENST00000525004 DDB1Q16531 1140 aa18.62■□□□□ 0.57
UBXN1-205ENST00000525004 SEPT12Q8IYM1 358 aa18.62■□□□□ 0.57
UBXN1-205ENST00000525004 SPG7Q9UQ90 795 aa18.62■□□□□ 0.57
UBXN1-205ENST00000525004 TNS2Q63HR2 1409 aa18.62■□□□□ 0.57
UBXN1-205ENST00000525004 DLG5Q8TDM6 1919 aa18.62■□□□□ 0.57
UBXN1-205ENST00000525004 MTHFSDQ2M296 383 aaKnown RBP18.61■□□□□ 0.57
UBXN1-205ENST00000525004 FAM9BQ8IZU0 186 aa18.61■□□□□ 0.57
UBXN1-205ENST00000525004 VIRMAQ69YN4 1812 aaKnown RBP18.59■□□□□ 0.57
UBXN1-205ENST00000525004 CYP27B1O15528 508 aa18.59■□□□□ 0.57
UBXN1-205ENST00000525004 NKX1-1Q15270 411 aaPredicted RBP18.59■□□□□ 0.57
UBXN1-205ENST00000525004 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
UBXN1-205ENST00000525004 RGS12O14924 1447 aa18.58■□□□□ 0.57
UBXN1-205ENST00000525004 PCDH11XQ9BZA7 1347 aa18.58■□□□□ 0.57
UBXN1-205ENST00000525004 PCDH11YQ9BZA8 1340 aa18.58■□□□□ 0.57
UBXN1-205ENST00000525004 CCDC146Q8IYE0 955 aa18.58■□□□□ 0.56
UBXN1-205ENST00000525004 GAS2L2Q8NHY3 880 aa18.58■□□□□ 0.56
UBXN1-205ENST00000525004 BCL9O00512 1426 aa18.57■□□□□ 0.56
UBXN1-205ENST00000525004 NEFMP07197 916 aa18.57■□□□□ 0.56
UBXN1-205ENST00000525004 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
UBXN1-205ENST00000525004 MAPK8IP3Q9UPT6 1336 aa18.56■□□□□ 0.56
UBXN1-205ENST00000525004 PHKG2P15735 406 aa18.56■□□□□ 0.56
UBXN1-205ENST00000525004 TMPOP42166 694 aaKnown RBP18.56■□□□□ 0.56
UBXN1-205ENST00000525004 NFE2L2Q16236 605 aa18.56■□□□□ 0.56
UBXN1-205ENST00000525004 AKAP4Q5JQC9 854 aa18.56■□□□□ 0.56
UBXN1-205ENST00000525004 IFNL2Q8IZJ0 200 aa18.56■□□□□ 0.56
UBXN1-205ENST00000525004 MARCH10Q8NA82 808 aaPredicted RBP18.56■□□□□ 0.56
UBXN1-205ENST00000525004 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
UBXN1-205ENST00000525004 ZNF530Q6P9A1 599 aaPredicted RBP18.55■□□□□ 0.56
UBXN1-205ENST00000525004 APAF1O14727 1248 aa18.54■□□□□ 0.56
UBXN1-205ENST00000525004 HTATSF1O43719 755 aaKnown RBP18.54■□□□□ 0.56
UBXN1-205ENST00000525004 PDE3BQ13370 1112 aa18.54■□□□□ 0.56
UBXN1-205ENST00000525004 KRT27Q7Z3Y8 459 aa18.54■□□□□ 0.56
UBXN1-205ENST00000525004 KAT6BQ8WYB5 2073 aa18.54■□□□□ 0.56
UBXN1-205ENST00000525004 SBF2Q86WG5 1849 aa18.53■□□□□ 0.56
UBXN1-205ENST00000525004 NGEFQ8N5V2 710 aa18.53■□□□□ 0.56
UBXN1-205ENST00000525004 DDX54Q8TDD1 881 aaKnown RBP18.53■□□□□ 0.56
UBXN1-205ENST00000525004 A0A0G2JS52 829 aa18.52■□□□□ 0.56
UBXN1-205ENST00000525004 GNAT3A8MTJ3 354 aa18.52■□□□□ 0.56
UBXN1-205ENST00000525004 HSP90AB1P08238 724 aaKnown RBP18.52■□□□□ 0.56
UBXN1-205ENST00000525004 MYT1Q01538 1121 aa18.52■□□□□ 0.56
UBXN1-205ENST00000525004 RIPK4P57078 832 aa18.51■□□□□ 0.55
UBXN1-205ENST00000525004 CCDC27Q2M243 656 aa18.51■□□□□ 0.55
UBXN1-205ENST00000525004 C1orf141Q5JVX7 400 aa18.51■□□□□ 0.55
UBXN1-205ENST00000525004 DCAF5Q96JK2 942 aa18.51■□□□□ 0.55
UBXN1-205ENST00000525004 MAP3K5Q99683 1374 aa18.51■□□□□ 0.55
UBXN1-205ENST00000525004 TRIM35Q9UPQ4 493 aa18.5■□□□□ 0.55
UBXN1-205ENST00000525004 ITGB4P16144 1822 aa18.5■□□□□ 0.55
UBXN1-205ENST00000525004 CEMIPQ8WUJ3 1361 aa18.5■□□□□ 0.55
UBXN1-205ENST00000525004 KDM6AO15550 1401 aaPredicted RBP18.49■□□□□ 0.55
UBXN1-205ENST00000525004 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
UBXN1-205ENST00000525004 IL17REQ8NFR9 667 aa18.49■□□□□ 0.55
UBXN1-205ENST00000525004 FAM196AQ6ZSG2 479 aa18.48■□□□□ 0.55
UBXN1-205ENST00000525004 LGR6Q9HBX8 967 aa18.48■□□□□ 0.55
UBXN1-205ENST00000525004 SIPA1L3O60292 1781 aaPredicted RBP18.47■□□□□ 0.55
UBXN1-205ENST00000525004 ERVV-2B6SEH9 535 aa18.47■□□□□ 0.55
UBXN1-205ENST00000525004 RNMTO43148 476 aaKnown RBP18.47■□□□□ 0.55
UBXN1-205ENST00000525004 LMOD3Q0VAK6 560 aa18.47■□□□□ 0.55
UBXN1-205ENST00000525004 MPRIPQ6WCQ1 1025 aa18.47■□□□□ 0.55
UBXN1-205ENST00000525004 RRP7AQ9Y3A4 280 aaKnown RBP18.47■□□□□ 0.55
UBXN1-205ENST00000525004 EP400Q96L91 3159 aa18.46■□□□□ 0.55
UBXN1-205ENST00000525004 DOT1LQ8TEK3 1739 aa18.46■□□□□ 0.55
UBXN1-205ENST00000525004 MRC1P22897 1456 aa18.46■□□□□ 0.54
UBXN1-205ENST00000525004 NEUROD2Q15784 382 aa18.44■□□□□ 0.54
UBXN1-205ENST00000525004 FAM182BQ5T319 152 aa18.44■□□□□ 0.54
UBXN1-205ENST00000525004 WWC1Q8IX03 1113 aa18.44■□□□□ 0.54
UBXN1-205ENST00000525004 RTF1Q92541 710 aaKnown RBP18.44■□□□□ 0.54
UBXN1-205ENST00000525004 ZNF521Q96K83 1311 aa18.44■□□□□ 0.54
UBXN1-205ENST00000525004 NHSQ6T4R5 1651 aa18.44■□□□□ 0.54
UBXN1-205ENST00000525004 MCM10Q7L590 875 aa18.43■□□□□ 0.54
UBXN1-205ENST00000525004 DCTN1Q14203 1278 aa18.42■□□□□ 0.54
UBXN1-205ENST00000525004 SLC52A2Q9HAB3 445 aa18.42■□□□□ 0.54
UBXN1-205ENST00000525004 PRIM1P49642 420 aaKnown RBP18.4■□□□□ 0.54
UBXN1-205ENST00000525004 WDR63Q8IWG1 891 aa18.4■□□□□ 0.54
UBXN1-205ENST00000525004 NFATC2IPQ8NCF5 419 aa18.4■□□□□ 0.54
UBXN1-205ENST00000525004 BCL11BQ9C0K0 894 aaPredicted RBP18.4■□□□□ 0.54
UBXN1-205ENST00000525004 KCNQ2O43526 872 aa18.39■□□□□ 0.53
UBXN1-205ENST00000525004 CABP4P57796 275 aa18.39■□□□□ 0.53
UBXN1-205ENST00000525004 TAF7Q15545 349 aaPredicted RBP18.39■□□□□ 0.53
UBXN1-205ENST00000525004 THUMPD2Q9BTF0 503 aaKnown RBP18.39■□□□□ 0.53
UBXN1-205ENST00000525004 BABAM1Q9NWV8 329 aa18.39■□□□□ 0.53
UBXN1-205ENST00000525004 BTAF1O14981 1849 aa18.39■□□□□ 0.53
UBXN1-205ENST00000525004 ZNF853P0CG23 659 aa18.38■□□□□ 0.53
UBXN1-205ENST00000525004 PIGBQ92521 554 aa18.38■□□□□ 0.53
UBXN1-205ENST00000525004 IL16Q14005 1332 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms