RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 NEUROD2Q15784 382 aa20.86■□□□□ 0.93
TSPAN4-213ENST00000524895 PLEKHO1Q53GL0 409 aaPredicted RBP20.86■□□□□ 0.93
TSPAN4-213ENST00000524895 GAS2L2Q8NHY3 880 aa20.86■□□□□ 0.93
TSPAN4-213ENST00000524895 AMOTQ4VCS5 1084 aa20.85■□□□□ 0.93
TSPAN4-213ENST00000524895 NGEFQ8N5V2 710 aa20.85■□□□□ 0.93
TSPAN4-213ENST00000524895 THRAP3Q9Y2W1 955 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-213ENST00000524895 PKD1L3Q7Z443 1732 aa20.84■□□□□ 0.93
TSPAN4-213ENST00000524895 ZBED9Q6R2W3 1325 aa20.84■□□□□ 0.93
TSPAN4-213ENST00000524895 MTHFSDQ2M296 383 aaKnown RBP20.84■□□□□ 0.93
TSPAN4-213ENST00000524895 ATRNO75882 1429 aa20.84■□□□□ 0.93
TSPAN4-213ENST00000524895 RIPK4P57078 832 aa20.83■□□□□ 0.93
TSPAN4-213ENST00000524895 TRPC5Q9UL62 973 aaPredicted RBP20.83■□□□□ 0.93
TSPAN4-213ENST00000524895 SPG7Q9UQ90 795 aa20.83■□□□□ 0.93
TSPAN4-213ENST00000524895 DISP2A7MBM2 1401 aa20.83■□□□□ 0.93
TSPAN4-213ENST00000524895 LMOD3Q0VAK6 560 aa20.81■□□□□ 0.92
TSPAN4-213ENST00000524895 NCBP3Q53F19 620 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-213ENST00000524895 ZNF530Q6P9A1 599 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-213ENST00000524895 CDCA7Q9BWT1 371 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-213ENST00000524895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.81■□□□□ 0.92
TSPAN4-213ENST00000524895 DLG5Q8TDM6 1919 aa20.8■□□□□ 0.92
TSPAN4-213ENST00000524895 CCDC27Q2M243 656 aa20.8■□□□□ 0.92
TSPAN4-213ENST00000524895 BARGINQ6ZT62 677 aa20.8■□□□□ 0.92
TSPAN4-213ENST00000524895 MAP3K5Q99683 1374 aa20.8■□□□□ 0.92
TSPAN4-213ENST00000524895 C1orf141Q5JVX7 400 aa20.79■□□□□ 0.92
TSPAN4-213ENST00000524895 ZNF772Q68DY9 489 aaPredicted RBP20.79■□□□□ 0.92
TSPAN4-213ENST00000524895 ILDR1Q86SU0 546 aaPredicted RBP20.79■□□□□ 0.92
TSPAN4-213ENST00000524895 GLI3P10071 1580 aa20.79■□□□□ 0.92
TSPAN4-213ENST00000524895 ZCRB1Q8TBF4 217 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-213ENST00000524895 GJD4Q96KN9 370 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-213ENST00000524895 PCDH11XQ9BZA7 1347 aa20.78■□□□□ 0.92
TSPAN4-213ENST00000524895 PCDH11YQ9BZA8 1340 aa20.78■□□□□ 0.92
TSPAN4-213ENST00000524895 GNAT3A8MTJ3 354 aa20.77■□□□□ 0.92
TSPAN4-213ENST00000524895 FAM98CQ17RN3 349 aaKnown RBP20.77■□□□□ 0.92
TSPAN4-213ENST00000524895 AKAP4Q5JQC9 854 aa20.77■□□□□ 0.92
TSPAN4-213ENST00000524895 WWC1Q8IX03 1113 aa20.77■□□□□ 0.92
TSPAN4-213ENST00000524895 RTF1Q92541 710 aaKnown RBP20.77■□□□□ 0.92
TSPAN4-213ENST00000524895 PHF23Q9BUL5 403 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-213ENST00000524895 QTRT2Q9H974 415 aaKnown RBP20.77■□□□□ 0.92
TSPAN4-213ENST00000524895 TRIM35Q9UPQ4 493 aa20.77■□□□□ 0.92
TSPAN4-213ENST00000524895 LRRC37A3O60309 1634 aa20.77■□□□□ 0.92
TSPAN4-213ENST00000524895 TNS2Q63HR2 1409 aa20.77■□□□□ 0.91
TSPAN4-213ENST00000524895 SHANK3Q9BYB0 1731 aa20.76■□□□□ 0.91
TSPAN4-213ENST00000524895 ZNF521Q96K83 1311 aa20.76■□□□□ 0.91
TSPAN4-213ENST00000524895 THSD7AQ9UPZ6 1657 aa20.74■□□□□ 0.91
TSPAN4-213ENST00000524895 A0A0G2JS52 829 aa20.74■□□□□ 0.91
TSPAN4-213ENST00000524895 HTATSF1O43719 755 aaKnown RBP20.74■□□□□ 0.91
TSPAN4-213ENST00000524895 PHKG2P15735 406 aa20.74■□□□□ 0.91
TSPAN4-213ENST00000524895 MYT1Q01538 1121 aa20.74■□□□□ 0.91
TSPAN4-213ENST00000524895 IFNL2Q8IZJ0 200 aa20.74■□□□□ 0.91
TSPAN4-213ENST00000524895 EXOC5O00471 708 aa20.73■□□□□ 0.91
TSPAN4-213ENST00000524895 DDB1Q16531 1140 aa20.73■□□□□ 0.91
TSPAN4-213ENST00000524895 CYP27B1O15528 508 aa20.72■□□□□ 0.91
TSPAN4-213ENST00000524895 CALD1Q05682 793 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-213ENST00000524895 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
TSPAN4-213ENST00000524895 MCM10Q7L590 875 aa20.72■□□□□ 0.91
TSPAN4-213ENST00000524895 DDX54Q8TDD1 881 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-213ENST00000524895 HSP90AB1P08238 724 aaKnown RBP20.71■□□□□ 0.91
TSPAN4-213ENST00000524895 GOLGA2Q08379 1002 aa20.71■□□□□ 0.91
TSPAN4-213ENST00000524895 PDE3BQ13370 1112 aa20.71■□□□□ 0.91
TSPAN4-213ENST00000524895 WDR63Q8IWG1 891 aa20.71■□□□□ 0.91
TSPAN4-213ENST00000524895 THUMPD2Q9BTF0 503 aaKnown RBP20.71■□□□□ 0.91
TSPAN4-213ENST00000524895 MPRIPQ6WCQ1 1025 aa20.7■□□□□ 0.9
TSPAN4-213ENST00000524895 ADAMTS7Q9UKP4 1686 aa20.69■□□□□ 0.9
TSPAN4-213ENST00000524895 RBM6P78332 1123 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-213ENST00000524895 DCAF5Q96JK2 942 aa20.68■□□□□ 0.9
TSPAN4-213ENST00000524895 IL16Q14005 1332 aa20.68■□□□□ 0.9
TSPAN4-213ENST00000524895 KDM6AO15550 1401 aaPredicted RBP20.68■□□□□ 0.9
TSPAN4-213ENST00000524895 RNMTO43148 476 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-213ENST00000524895 IL17REQ8NFR9 667 aa20.67■□□□□ 0.9
TSPAN4-213ENST00000524895 CEMIPQ8WUJ3 1361 aa20.67■□□□□ 0.9
TSPAN4-213ENST00000524895 SCN11AQ9UI33 1791 aa20.67■□□□□ 0.9
TSPAN4-213ENST00000524895 VIRMAQ69YN4 1812 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-213ENST00000524895 E9PSI1 815 aa20.66■□□□□ 0.9
TSPAN4-213ENST00000524895 ONECUT3O60422 494 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-213ENST00000524895 LGR6Q9HBX8 967 aa20.66■□□□□ 0.9
TSPAN4-213ENST00000524895 TEFQ10587 303 aa20.65■□□□□ 0.9
TSPAN4-213ENST00000524895 NKX1-1Q15270 411 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-213ENST00000524895 SEPT12Q8IYM1 358 aa20.65■□□□□ 0.9
TSPAN4-213ENST00000524895 CDCA7LQ96GN5 454 aa20.65■□□□□ 0.9
TSPAN4-213ENST00000524895 RGS17Q9UGC6 210 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-213ENST00000524895 MYH16Q9H6N6 1097 aa20.64■□□□□ 0.89
TSPAN4-213ENST00000524895 IFT57Q9NWB7 429 aa20.64■□□□□ 0.89
TSPAN4-213ENST00000524895 LAS1LQ9Y4W2 734 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-213ENST00000524895 MRC1P22897 1456 aa20.63■□□□□ 0.89
TSPAN4-213ENST00000524895 CENPBP07199 599 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-213ENST00000524895 RXRBP28702 533 aa20.63■□□□□ 0.89
TSPAN4-213ENST00000524895 GNAI1P63096 354 aa20.63■□□□□ 0.89
TSPAN4-213ENST00000524895 SLFN5Q08AF3 891 aa20.63■□□□□ 0.89
TSPAN4-213ENST00000524895 SPINK5Q9NQ38 1064 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-213ENST00000524895 TOGARAM1Q9Y4F4 1720 aa20.62■□□□□ 0.89
TSPAN4-213ENST00000524895 MARCH10Q8NA82 808 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-213ENST00000524895 CFAP44Q96MT7 982 aa20.61■□□□□ 0.89
TSPAN4-213ENST00000524895 SIPA1L3O60292 1781 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-213ENST00000524895 TAF7Q15545 349 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-213ENST00000524895 POTEAQ6S8J7 498 aa20.6■□□□□ 0.89
TSPAN4-213ENST00000524895 SLC52A2Q9HAB3 445 aa20.6■□□□□ 0.89
TSPAN4-213ENST00000524895 DOT1LQ8TEK3 1739 aa20.6■□□□□ 0.89
TSPAN4-213ENST00000524895 FANCIQ9NVI1 1328 aa20.59■□□□□ 0.89
TSPAN4-213ENST00000524895 ERVV-2B6SEH9 535 aa20.59■□□□□ 0.89
TSPAN4-213ENST00000524895 ZNF853P0CG23 659 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms