RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 NSD2O96028 1365 aa15.37■□□□□ 0.05
TRAPPC4-204ENST00000524797 KIF7Q2M1P5 1343 aa15.37■□□□□ 0.05
TRAPPC4-204ENST00000524797 DDX54Q8TDD1 881 aaKnown RBP15.37■□□□□ 0.05
TRAPPC4-204ENST00000524797 NCAPD2Q15021 1401 aa15.36■□□□□ 0.05
TRAPPC4-204ENST00000524797 WASHC2AQ641Q2 1341 aa15.36■□□□□ 0.05
TRAPPC4-204ENST00000524797 ZCRB1Q8TBF4 217 aaKnown RBP15.36■□□□□ 0.05
TRAPPC4-204ENST00000524797 PPM1GO15355 546 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC4-204ENST00000524797 PROM2Q8N271 834 aa15.35■□□□□ 0.05
TRAPPC4-204ENST00000524797 POLKQ9UBT6 870 aa15.35■□□□□ 0.05
TRAPPC4-204ENST00000524797 CASZ1Q86V15 1759 aa15.35■□□□□ 0.05
TRAPPC4-204ENST00000524797 RAPGEF4Q8WZA2 1011 aa15.35■□□□□ 0.05
TRAPPC4-204ENST00000524797 TATP17735 454 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC4-204ENST00000524797 PAPPAQ13219 1627 aa15.34■□□□□ 0.05
TRAPPC4-204ENST00000524797 TNNT2P45379 298 aaPredicted RBP15.33■□□□□ 0.05
TRAPPC4-204ENST00000524797 TXNRD1Q16881 649 aa15.33■□□□□ 0.05
TRAPPC4-204ENST00000524797 ANO8Q9HCE9 1232 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC4-204ENST00000524797 LY75O60449 1722 aa15.32■□□□□ 0.04
TRAPPC4-204ENST00000524797 TOGARAM1Q9Y4F4 1720 aa15.31■□□□□ 0.04
TRAPPC4-204ENST00000524797 ITGB4P16144 1822 aa15.31■□□□□ 0.04
TRAPPC4-204ENST00000524797 KNSTRNQ9Y448 316 aa15.31■□□□□ 0.04
TRAPPC4-204ENST00000524797 MORC1Q86VD1 984 aa15.3■□□□□ 0.04
TRAPPC4-204ENST00000524797 EYA1Q99502 592 aa15.3■□□□□ 0.04
TRAPPC4-204ENST00000524797 EIF4A2Q14240 407 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-204ENST00000524797 PCDH11XQ9BZA7 1347 aa15.29■□□□□ 0.04
TRAPPC4-204ENST00000524797 PCDH11YQ9BZA8 1340 aa15.29■□□□□ 0.04
TRAPPC4-204ENST00000524797 PRIM1P49642 420 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-204ENST00000524797 AMER1Q5JTC6 1135 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC4-204ENST00000524797 STK32BQ9NY57 414 aa15.28■□□□□ 0.04
TRAPPC4-204ENST00000524797 QSER1Q2KHR3 1735 aa15.28■□□□□ 0.04
TRAPPC4-204ENST00000524797 SYTL4Q96C24 671 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC4-204ENST00000524797 TUBGCP6Q96RT7 1819 aa15.27■□□□□ 0.04
TRAPPC4-204ENST00000524797 CYP27B1O15528 508 aa15.26■□□□□ 0.03
TRAPPC4-204ENST00000524797 SLC15A2Q16348 729 aa15.26■□□□□ 0.03
TRAPPC4-204ENST00000524797 PER1O15534 1290 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC4-204ENST00000524797 LRRC4BQ9NT99 713 aa15.25■□□□□ 0.03
TRAPPC4-204ENST00000524797 SPG7Q9UQ90 795 aa15.25■□□□□ 0.03
TRAPPC4-204ENST00000524797 IGSF1Q8N6C5 1336 aa15.25■□□□□ 0.03
TRAPPC4-204ENST00000524797 SLC27A3Q5K4L6 730 aa15.23■□□□□ 0.03
TRAPPC4-204ENST00000524797 PDGFDQ9GZP0 370 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC4-204ENST00000524797 SPON1Q9HCB6 807 aa15.23■□□□□ 0.03
TRAPPC4-204ENST00000524797 PLEKHG2Q9H7P9 1386 aa15.23■□□□□ 0.03
TRAPPC4-204ENST00000524797 TAF1LQ8IZX4 1826 aa15.23■□□□□ 0.03
TRAPPC4-204ENST00000524797 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRAPPC4-204ENST00000524797 C5P01031 1676 aa15.22■□□□□ 0.03
TRAPPC4-204ENST00000524797 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC4-204ENST00000524797 ZNF827Q17R98 1081 aa15.22■□□□□ 0.03
TRAPPC4-204ENST00000524797 AKT1S1Q96B36 256 aa15.21■□□□□ 0.02
TRAPPC4-204ENST00000524797 CC2D1BQ5T0F9 858 aaKnown RBP15.2■□□□□ 0.02
TRAPPC4-204ENST00000524797 NPC1L1Q9UHC9 1359 aa15.2■□□□□ 0.02
TRAPPC4-204ENST00000524797 PHKG2P15735 406 aa15.19■□□□□ 0.02
TRAPPC4-204ENST00000524797 IL13P35225 146 aa15.19■□□□□ 0.02
TRAPPC4-204ENST00000524797 KCNQ4P56696 695 aa15.19■□□□□ 0.02
TRAPPC4-204ENST00000524797 COL24A1Q17RW2 1714 aa15.19■□□□□ 0.02
TRAPPC4-204ENST00000524797 ZBTB7AO95365 584 aa15.19■□□□□ 0.02
TRAPPC4-204ENST00000524797 MPRIPQ6WCQ1 1025 aa15.19■□□□□ 0.02
TRAPPC4-204ENST00000524797 IFNL2Q8IZJ0 200 aa15.19■□□□□ 0.02
TRAPPC4-204ENST00000524797 CCNL1Q9UK58 526 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC4-204ENST00000524797 MTHFSP49914 203 aa15.17■□□□□ 0.02
TRAPPC4-204ENST00000524797 AEBP1Q8IUX7 1158 aa15.17■□□□□ 0.02
TRAPPC4-204ENST00000524797 PALLDQ8WX93 1383 aa15.17■□□□□ 0.02
TRAPPC4-204ENST00000524797 VIRMAQ69YN4 1812 aaKnown RBP15.17■□□□□ 0.02
TRAPPC4-204ENST00000524797 PPP1R1BQ9UD71 204 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC4-204ENST00000524797 PLEKHO1Q53GL0 409 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-204ENST00000524797 PIGBQ92521 554 aa15.16■□□□□ 0.02
TRAPPC4-204ENST00000524797 ATF5Q9Y2D1 282 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-204ENST00000524797 KDRP35968 1356 aa15.16■□□□□ 0.02
TRAPPC4-204ENST00000524797 PTGER2P43116 358 aa15.15■□□□□ 0.02
TRAPPC4-204ENST00000524797 SULT6B1Q6IMI4 303 aa15.15■□□□□ 0.02
TRAPPC4-204ENST00000524797 SMARCC1Q92922 1105 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC4-204ENST00000524797 MTFR1LQ9H019 292 aa15.15■□□□□ 0.02
TRAPPC4-204ENST00000524797 PNPLA7Q6ZV29 1317 aa15.15■□□□□ 0.02
TRAPPC4-204ENST00000524797 COL3A1P02461 1466 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC4-204ENST00000524797 SCN11AQ9UI33 1791 aa15.15■□□□□ 0.02
TRAPPC4-204ENST00000524797 C4BP0C0L5 1744 aa15.15■□□□□ 0.02
TRAPPC4-204ENST00000524797 AMOTQ4VCS5 1084 aa15.14■□□□□ 0.01
TRAPPC4-204ENST00000524797 ZNF530Q6P9A1 599 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC4-204ENST00000524797 TMOD3Q9NYL9 352 aa15.14■□□□□ 0.01
TRAPPC4-204ENST00000524797 CNGB1Q14028 1251 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC4-204ENST00000524797 KDM6AO15550 1401 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC4-204ENST00000524797 UBR3Q6ZT12 1888 aa15.13■□□□□ 0.01
TRAPPC4-204ENST00000524797 SGIP1Q9BQI5 828 aa15.13■□□□□ 0.01
TRAPPC4-204ENST00000524797 TFCP2L1Q9NZI6 479 aa15.13■□□□□ 0.01
TRAPPC4-204ENST00000524797 HSP90AB1P08238 724 aaKnown RBP15.12■□□□□ 0.01
TRAPPC4-204ENST00000524797 ZNF831Q5JPB2 1677 aa15.11■□□□□ 0.01
TRAPPC4-204ENST00000524797 DIAPH1O60610 1272 aaKnown RBP15.11■□□□□ 0.01
TRAPPC4-204ENST00000524797 ERVV-2B6SEH9 535 aa15.11■□□□□ 0.01
TRAPPC4-204ENST00000524797 SLC16A10Q8TF71 515 aa15.11■□□□□ 0.01
TRAPPC4-204ENST00000524797 DCAF5Q96JK2 942 aa15.11■□□□□ 0.01
TRAPPC4-204ENST00000524797 ASAP1Q9ULH1 1129 aa15.11■□□□□ 0.01
TRAPPC4-204ENST00000524797 HMGB2P26583 209 aaKnown RBP15.1■□□□□ 0.01
TRAPPC4-204ENST00000524797 SRCAPQ6ZRS2 3230 aa15.1■□□□□ 0.01
TRAPPC4-204ENST00000524797 C1orf141Q5JVX7 400 aa15.09■□□□□ 0.01
TRAPPC4-204ENST00000524797 ATG3Q9NT62 314 aa15.09■□□□□ 0.01
TRAPPC4-204ENST00000524797 LOC102724428A0A0B4J2F2 783 aa15.09■□□□□ 0.01
TRAPPC4-204ENST00000524797 HMOX1P09601 288 aa15.09■□□□□ 0.01
TRAPPC4-204ENST00000524797 COL5A3P25940 1745 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC4-204ENST00000524797 SIK1P57059 783 aa15.09■□□□□ 0.01
TRAPPC4-204ENST00000524797 COL23A1Q86Y22 540 aaPredicted RBP15.08■□□□□ 0
TRAPPC4-204ENST00000524797 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0
TRAPPC4-204ENST00000524797 LINC00116Q8NCU8 138 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms