RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 RTL1A6NKG5 1358 aa9.09□□□□□ -0.95
NUP98-213ENST00000524563 PKD1L3Q7Z443 1732 aa9.08□□□□□ -0.96
NUP98-213ENST00000524563 TOGARAM1Q9Y4F4 1720 aa9.08□□□□□ -0.96
NUP98-213ENST00000524563 MSH5O43196 834 aa9.08□□□□□ -0.96
NUP98-213ENST00000524563 HSPA5P11021 654 aaKnown RBP9.08□□□□□ -0.96
NUP98-213ENST00000524563 EIF4G2P78344 907 aaKnown RBP eCLIP9.08□□□□□ -0.96
NUP98-213ENST00000524563 TMF1P82094 1093 aa9.08□□□□□ -0.96
NUP98-213ENST00000524563 PUS7Q96PZ0 661 aaKnown RBP9.08□□□□□ -0.96
NUP98-213ENST00000524563 MEGF6O75095 1541 aa9.08□□□□□ -0.96
NUP98-213ENST00000524563 UBR3Q6ZT12 1888 aa9.07□□□□□ -0.96
NUP98-213ENST00000524563 ZNF827Q17R98 1081 aa9.07□□□□□ -0.96
NUP98-213ENST00000524563 ARXQ96QS3 562 aa9.07□□□□□ -0.96
NUP98-213ENST00000524563 SLC12A5Q9H2X9 1139 aa9.07□□□□□ -0.96
NUP98-213ENST00000524563 VIRMAQ69YN4 1812 aaKnown RBP9.06□□□□□ -0.96
NUP98-213ENST00000524563 SLC24A1O60721 1099 aa9.06□□□□□ -0.96
NUP98-213ENST00000524563 PTGER2P43116 358 aa9.06□□□□□ -0.96
NUP98-213ENST00000524563 GPR162Q16538 588 aa9.06□□□□□ -0.96
NUP98-213ENST00000524563 PROM2Q8N271 834 aa9.06□□□□□ -0.96
NUP98-213ENST00000524563 TFCP2L1Q9NZI6 479 aa9.06□□□□□ -0.96
NUP98-213ENST00000524563 ANKRD36BQ8N2N9 1353 aa9.06□□□□□ -0.96
NUP98-213ENST00000524563 C4BP0C0L5 1744 aa9.05□□□□□ -0.96
NUP98-213ENST00000524563 IP6K1Q92551 441 aa9.05□□□□□ -0.96
NUP98-213ENST00000524563 SYT17Q9BSW7 474 aa9.05□□□□□ -0.96
NUP98-213ENST00000524563 MAP3K19Q56UN5 1328 aa9.05□□□□□ -0.96
NUP98-213ENST00000524563 MAP3K5Q99683 1374 aa9.04□□□□□ -0.96
NUP98-213ENST00000524563 SENP3-EIF4A1A0A087X0R7 540 aa9.04□□□□□ -0.96
NUP98-213ENST00000524563 SLC27A3Q5K4L6 730 aa9.04□□□□□ -0.96
NUP98-213ENST00000524563 ZNF784Q8NCA9 323 aaPredicted RBP9.04□□□□□ -0.96
NUP98-213ENST00000524563 RAPGEF4Q8WZA2 1011 aa9.04□□□□□ -0.96
NUP98-213ENST00000524563 HOXC9P31274 260 aa9.03□□□□□ -0.96
NUP98-213ENST00000524563 USHBP1Q8N6Y0 703 aa9.03□□□□□ -0.96
NUP98-213ENST00000524563 CCNL1Q9UK58 526 aaPredicted RBP9.03□□□□□ -0.96
NUP98-213ENST00000524563 PCDH11XQ9BZA7 1347 aa9.03□□□□□ -0.96
NUP98-213ENST00000524563 PCDH11YQ9BZA8 1340 aa9.03□□□□□ -0.96
NUP98-213ENST00000524563 FLT4P35916 1363 aa9.02□□□□□ -0.97
NUP98-213ENST00000524563 TATP17735 454 aaPredicted RBP9.02□□□□□ -0.97
NUP98-213ENST00000524563 KCNQ4P56696 695 aa9.02□□□□□ -0.97
NUP98-213ENST00000524563 RRS1Q15050 365 aaKnown RBP9.02□□□□□ -0.97
NUP98-213ENST00000524563 CDCA8Q53HL2 280 aa9.02□□□□□ -0.97
NUP98-213ENST00000524563 ZCRB1Q8TBF4 217 aaKnown RBP9.02□□□□□ -0.97
NUP98-213ENST00000524563 NSD3Q9BZ95 1437 aa9.02□□□□□ -0.97
NUP98-213ENST00000524563 PNPLA7Q6ZV29 1317 aa9.02□□□□□ -0.97
NUP98-213ENST00000524563 GIGYF1O75420 1035 aaPredicted RBP9.01□□□□□ -0.97
NUP98-213ENST00000524563 PRIM1P49642 420 aaKnown RBP9.01□□□□□ -0.97
NUP98-213ENST00000524563 MSL1Q68DK7 614 aa9.01□□□□□ -0.97
NUP98-213ENST00000524563 SLC16A10Q8TF71 515 aa9.01□□□□□ -0.97
NUP98-213ENST00000524563 POLR3GLQ9BT43 218 aa9.01□□□□□ -0.97
NUP98-213ENST00000524563 GGNBP2Q9H3C7 697 aa9.01□□□□□ -0.97
NUP98-213ENST00000524563 LRRC4BQ9NT99 713 aa9.01□□□□□ -0.97
NUP98-213ENST00000524563 KIF7Q2M1P5 1343 aa9.01□□□□□ -0.97
NUP98-213ENST00000524563 NSD2O96028 1365 aa9□□□□□ -0.97
NUP98-213ENST00000524563 PALLDQ8WX93 1383 aa9□□□□□ -0.97
NUP98-213ENST00000524563 N4BP2Q86UW6 1770 aaPredicted RBP9□□□□□ -0.97
NUP98-213ENST00000524563 SGIP1Q9BQI5 828 aa9□□□□□ -0.97
NUP98-213ENST00000524563 CGNL1Q0VF96 1302 aa9□□□□□ -0.97
NUP98-213ENST00000524563 PPM1GO15355 546 aaPredicted RBP8.99□□□□□ -0.97
NUP98-213ENST00000524563 AKT1S1Q96B36 256 aa8.99□□□□□ -0.97
NUP98-213ENST00000524563 AK7Q96M32 723 aa8.99□□□□□ -0.97
NUP98-213ENST00000524563 C4AP0C0L4 1744 aa8.99□□□□□ -0.97
NUP98-213ENST00000524563 COL5A3P25940 1745 aaPredicted RBP8.98□□□□□ -0.97
NUP98-213ENST00000524563 FBLN1P23142 703 aa8.98□□□□□ -0.97
NUP98-213ENST00000524563 CARD14Q9BXL6 1004 aa8.98□□□□□ -0.97
NUP98-213ENST00000524563 INSRP06213 1382 aa8.98□□□□□ -0.97
NUP98-213ENST00000524563 PHF14O94880 888 aa8.97□□□□□ -0.97
NUP98-213ENST00000524563 HMGB2P26583 209 aaKnown RBP8.97□□□□□ -0.97
NUP98-213ENST00000524563 NLGN2Q8NFZ4 835 aa8.97□□□□□ -0.97
NUP98-213ENST00000524563 WASHC2AQ641Q2 1341 aa8.97□□□□□ -0.97
NUP98-213ENST00000524563 KIF24Q5T7B8 1368 aa8.97□□□□□ -0.97
NUP98-213ENST00000524563 KIF13BQ9NQT8 1826 aa8.96□□□□□ -0.97
NUP98-213ENST00000524563 FYB1O15117 783 aa8.96□□□□□ -0.98
NUP98-213ENST00000524563 C1QTNF8P60827 252 aa8.96□□□□□ -0.98
NUP98-213ENST00000524563 NBPF6Q5VWK0 638 aa8.96□□□□□ -0.98
NUP98-213ENST00000524563 MPRIPQ6WCQ1 1025 aa8.96□□□□□ -0.98
NUP98-213ENST00000524563 NBPF4Q96M43 638 aa8.96□□□□□ -0.98
NUP98-213ENST00000524563 BRCA1P38398 1863 aaKnown RBP8.96□□□□□ -0.98
NUP98-213ENST00000524563 SCN11AQ9UI33 1791 aa8.95□□□□□ -0.98
NUP98-213ENST00000524563 ZNF316A6NFI3 1004 aaPredicted RBP8.95□□□□□ -0.98
NUP98-213ENST00000524563 GRIN3BO60391 1043 aa8.95□□□□□ -0.98
NUP98-213ENST00000524563 FLAD1Q8NFF5 587 aa8.95□□□□□ -0.98
NUP98-213ENST00000524563 SMARCC1Q92922 1105 aaPredicted RBP8.95□□□□□ -0.98
NUP98-213ENST00000524563 ARFGEF1Q9Y6D6 1849 aa8.95□□□□□ -0.98
NUP98-213ENST00000524563 ATP10DQ9P241 1426 aa8.95□□□□□ -0.98
NUP98-213ENST00000524563 CICQ96RK0 1608 aaPredicted RBP8.94□□□□□ -0.98
NUP98-213ENST00000524563 HSP90AB2PQ58FF8 381 aa8.94□□□□□ -0.98
NUP98-213ENST00000524563 COL23A1Q86Y22 540 aaPredicted RBP8.94□□□□□ -0.98
NUP98-213ENST00000524563 PANK3Q9H999 370 aa8.94□□□□□ -0.98
NUP98-213ENST00000524563 WWC3Q9ULE0 1092 aa8.94□□□□□ -0.98
NUP98-213ENST00000524563 EMILIN1Q9Y6C2 1016 aa8.94□□□□□ -0.98
NUP98-213ENST00000524563 ZNF526Q8TF50 670 aaPredicted RBP8.93□□□□□ -0.98
NUP98-213ENST00000524563 TMOD3Q9NYL9 352 aa8.93□□□□□ -0.98
NUP98-213ENST00000524563 SPG7Q9UQ90 795 aa8.93□□□□□ -0.98
NUP98-213ENST00000524563 ZNF831Q5JPB2 1677 aa8.93□□□□□ -0.98
NUP98-213ENST00000524563 KIAA1551Q9HCM1 1747 aa8.93□□□□□ -0.98
NUP98-213ENST00000524563 CACNA1SQ13698 1873 aa8.93□□□□□ -0.98
NUP98-213ENST00000524563 MYH14Q7Z406 1995 aaKnown RBP8.93□□□□□ -0.98
NUP98-213ENST00000524563 CCDC88AQ3V6T2 1871 aa8.92□□□□□ -0.98
NUP98-213ENST00000524563 IGSF1Q8N6C5 1336 aa8.92□□□□□ -0.98
NUP98-213ENST00000524563 GNPATO15228 680 aa8.92□□□□□ -0.98
NUP98-213ENST00000524563 YBX3P16989 372 aaKnown RBP eCLIP8.92□□□□□ -0.987e-7■■□□□ 12.6
NUP98-213ENST00000524563 TJP1Q07157 1748 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms