RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 CCNL1Q9UK58 526 aaPredicted RBP12.16□□□□□ -0.46
PUM1-213ENST00000524516 PXDNLA1KZ92 1463 aa12.15□□□□□ -0.46
PUM1-213ENST00000524516 CPSF1Q10570 1443 aaKnown RBP12.15□□□□□ -0.46
PUM1-213ENST00000524516 RGS19P49795 217 aa12.15□□□□□ -0.46
PUM1-213ENST00000524516 CFAP44Q96MT7 982 aa12.15□□□□□ -0.46
PUM1-213ENST00000524516 MKRN1Q9UHC7 482 aaKnown RBP12.15□□□□□ -0.46
PUM1-213ENST00000524516 RGPD5Q99666 1765 aa12.15□□□□□ -0.46
PUM1-213ENST00000524516 LBX1P52954 281 aa12.14□□□□□ -0.47
PUM1-213ENST00000524516 NLRP6P59044 892 aa12.14□□□□□ -0.47
PUM1-213ENST00000524516 SLIT3O75094 1523 aa12.14□□□□□ -0.47
PUM1-213ENST00000524516 LY75O60449 1722 aa12.14□□□□□ -0.47
PUM1-213ENST00000524516 FLAD1Q8NFF5 587 aa12.13□□□□□ -0.47
PUM1-213ENST00000524516 IL2RBP14784 551 aa12.11□□□□□ -0.47
PUM1-213ENST00000524516 CCDC61Q9Y6R9 512 aa12.11□□□□□ -0.47
PUM1-213ENST00000524516 SOX12O15370 315 aa12.1□□□□□ -0.47
PUM1-213ENST00000524516 FCHSD2O94868 740 aa12.1□□□□□ -0.47
PUM1-213ENST00000524516 RNF181Q9P0P0 153 aa12.1□□□□□ -0.47
PUM1-213ENST00000524516 N4BP2Q86UW6 1770 aaPredicted RBP12.1□□□□□ -0.47
PUM1-213ENST00000524516 C5P01031 1676 aa12.1□□□□□ -0.47
PUM1-213ENST00000524516 ADGRB1O14514 1584 aa12.09□□□□□ -0.47
PUM1-213ENST00000524516 CDK19Q9BWU1 502 aa12.09□□□□□ -0.47
PUM1-213ENST00000524516 USP54Q70EL1 1684 aa12.09□□□□□ -0.47
PUM1-213ENST00000524516 DOT1LQ8TEK3 1739 aa12.08□□□□□ -0.47
PUM1-213ENST00000524516 PLEKHG3A1L390 1219 aa12.08□□□□□ -0.48
PUM1-213ENST00000524516 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
PUM1-213ENST00000524516 DDX54Q8TDD1 881 aaKnown RBP12.08□□□□□ -0.48
PUM1-213ENST00000524516 CREBZFQ9NS37 354 aa12.08□□□□□ -0.48
PUM1-213ENST00000524516 NLRP2Q9NX02 1062 aa12.08□□□□□ -0.48
PUM1-213ENST00000524516 USP47Q96K76 1375 aa12.07□□□□□ -0.48
PUM1-213ENST00000524516 PHF14O94880 888 aa12.07□□□□□ -0.48
PUM1-213ENST00000524516 ARHGEF25Q86VW2 580 aa12.07□□□□□ -0.48
PUM1-213ENST00000524516 ANKRD36BQ8N2N9 1353 aa12.06□□□□□ -0.48
PUM1-213ENST00000524516 A0A0G2JLW4 131 aa12.06□□□□□ -0.48
PUM1-213ENST00000524516 VEGFAP15692 232 aaPredicted RBP12.06□□□□□ -0.48
PUM1-213ENST00000524516 QRICH2Q9H0J4 1663 aa12.06□□□□□ -0.48
PUM1-213ENST00000524516 CNTNAP1P78357 1384 aa12.05□□□□□ -0.48
PUM1-213ENST00000524516 HSPA8P11142 646 aaKnown RBP12.05□□□□□ -0.48
PUM1-213ENST00000524516 TGFB2P61812 414 aa12.05□□□□□ -0.48
PUM1-213ENST00000524516 AK7Q96M32 723 aa12.05□□□□□ -0.48
PUM1-213ENST00000524516 KIAA1551Q9HCM1 1747 aa12.05□□□□□ -0.48
PUM1-213ENST00000524516 HMGB2P26583 209 aaKnown RBP12.04□□□□□ -0.48
PUM1-213ENST00000524516 KCNH5Q8NCM2 988 aa12.04□□□□□ -0.48
PUM1-213ENST00000524516 NSD2O96028 1365 aa12.04□□□□□ -0.48
PUM1-213ENST00000524516 SMIM5Q71RC9 77 aa12.03□□□□□ -0.48
PUM1-213ENST00000524516 WBP1LQ9NX94 342 aa12.03□□□□□ -0.48
PUM1-213ENST00000524516 NSD3Q9BZ95 1437 aa12.03□□□□□ -0.48
PUM1-213ENST00000524516 ERBB3P21860 1342 aa12.02□□□□□ -0.49
PUM1-213ENST00000524516 KIF13BQ9NQT8 1826 aa12.02□□□□□ -0.49
PUM1-213ENST00000524516 C4BP0C0L5 1744 aa12.01□□□□□ -0.49
PUM1-213ENST00000524516 ARFGEF1Q9Y6D6 1849 aa12.01□□□□□ -0.49
PUM1-213ENST00000524516 TOGARAM1Q9Y4F4 1720 aa12□□□□□ -0.49
PUM1-213ENST00000524516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12□□□□□ -0.49
PUM1-213ENST00000524516 TNRC18O15417 2968 aaPredicted RBP12□□□□□ -0.49
PUM1-213ENST00000524516 MMP10P09238 476 aa12□□□□□ -0.49
PUM1-213ENST00000524516 DPEP1P16444 411 aa12□□□□□ -0.49
PUM1-213ENST00000524516 VEGFBP49765 207 aa12□□□□□ -0.49
PUM1-213ENST00000524516 SRPK2P78362 688 aaKnown RBP12□□□□□ -0.49
PUM1-213ENST00000524516 PRPF38BQ5VTL8 546 aaKnown RBP12□□□□□ -0.49
PUM1-213ENST00000524516 TAF1LQ8IZX4 1826 aa12□□□□□ -0.49
PUM1-213ENST00000524516 LOC105371045A0A1W2PR82 267 aa11.99□□□□□ -0.49
PUM1-213ENST00000524516 ZC3H4Q9UPT8 1303 aaKnown RBP11.99□□□□□ -0.49
PUM1-213ENST00000524516 BRCA1P38398 1863 aaKnown RBP11.99□□□□□ -0.49
PUM1-213ENST00000524516 GLTPD2A6NH11 291 aa11.98□□□□□ -0.49
PUM1-213ENST00000524516 AMIGO3Q86WK7 504 aa11.98□□□□□ -0.49
PUM1-213ENST00000524516 UBR3Q6ZT12 1888 aa11.97□□□□□ -0.49
PUM1-213ENST00000524516 VIRMAQ69YN4 1812 aaKnown RBP11.97□□□□□ -0.49
PUM1-213ENST00000524516 NFAT5O94916 1531 aa11.97□□□□□ -0.49
PUM1-213ENST00000524516 PALLDQ8WX93 1383 aa11.96□□□□□ -0.49
PUM1-213ENST00000524516 SSFA2P28290 1259 aa11.96□□□□□ -0.49
PUM1-213ENST00000524516 MAP2K1Q02750 393 aaPredicted RBP11.96□□□□□ -0.49
PUM1-213ENST00000524516 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
PUM1-213ENST00000524516 DCAF5Q96JK2 942 aa11.96□□□□□ -0.49
PUM1-213ENST00000524516 CCDC87Q9NVE4 849 aa11.96□□□□□ -0.49
PUM1-213ENST00000524516 PIM2Q9P1W9 311 aa11.96□□□□□ -0.49
PUM1-213ENST00000524516 DALRD3Q5D0E6 543 aaKnown RBP11.95□□□□□ -0.5
PUM1-213ENST00000524516 ANKRD24Q8TF21 1146 aa11.95□□□□□ -0.5
PUM1-213ENST00000524516 BEGAINQ9BUH8 593 aa11.95□□□□□ -0.5
PUM1-213ENST00000524516 SBF1O95248 1867 aa11.95□□□□□ -0.5
PUM1-213ENST00000524516 TIAM2Q8IVF5 1701 aa11.94□□□□□ -0.5
PUM1-213ENST00000524516 PDE4DIPQ5VU43 2346 aa11.94□□□□□ -0.5
PUM1-213ENST00000524516 RASSF7Q02833 373 aa11.93□□□□□ -0.5
PUM1-213ENST00000524516 MCOLN1Q9GZU1 580 aa11.93□□□□□ -0.5
PUM1-213ENST00000524516 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
PUM1-213ENST00000524516 CABP2Q9NPB3 220 aa11.92□□□□□ -0.5
PUM1-213ENST00000524516 CABP1Q9NZU7 370 aa11.92□□□□□ -0.5
PUM1-213ENST00000524516 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
PUM1-213ENST00000524516 GNPATO15228 680 aa11.91□□□□□ -0.5
PUM1-213ENST00000524516 LMNB1P20700 586 aa11.91□□□□□ -0.5
PUM1-213ENST00000524516 KCNA3P22001 575 aa11.91□□□□□ -0.5
PUM1-213ENST00000524516 DPY19L2Q6NUT2 758 aa11.91□□□□□ -0.5
PUM1-213ENST00000524516 LTN1O94822 1766 aa11.91□□□□□ -0.5
PUM1-213ENST00000524516 C4AP0C0L4 1744 aa11.91□□□□□ -0.5
PUM1-213ENST00000524516 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.5
PUM1-213ENST00000524516 PARP3Q9Y6F1 533 aa11.9□□□□□ -0.5
PUM1-213ENST00000524516 TTC21BQ7Z4L5 1316 aa11.89□□□□□ -0.51
PUM1-213ENST00000524516 KDM6AO15550 1401 aaPredicted RBP11.89□□□□□ -0.51
PUM1-213ENST00000524516 GCC1Q96CN9 775 aa11.89□□□□□ -0.51
PUM1-213ENST00000524516 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
PUM1-213ENST00000524516 WDR33Q9C0J8 1336 aaKnown RBP11.88□□□□□ -0.51
PUM1-213ENST00000524516 FAM208AQ9UK61 1670 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms