RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 OVOS2A0A0J9YW53 1432 aa9.53□□□□□ -0.88
VPS11-201ENST00000524454 OVOS2Q6IE36 1432 aa9.53□□□□□ -0.88
VPS11-201ENST00000524454 NSD2O96028 1365 aa9.52□□□□□ -0.88
VPS11-201ENST00000524454 ANKRD36BQ8N2N9 1353 aa9.52□□□□□ -0.88
VPS11-201ENST00000524454 MRS2Q9HD23 443 aa9.52□□□□□ -0.89
VPS11-201ENST00000524454 RGPD2P0DJD1 1756 aa9.52□□□□□ -0.89
VPS11-201ENST00000524454 ZBED9Q6R2W3 1325 aa9.52□□□□□ -0.89
VPS11-201ENST00000524454 AATKQ6ZMQ8 1374 aa9.51□□□□□ -0.89
VPS11-201ENST00000524454 USP31Q70CQ4 1352 aa9.51□□□□□ -0.89
VPS11-201ENST00000524454 KRT27Q7Z3Y8 459 aa9.51□□□□□ -0.89
VPS11-201ENST00000524454 ARHGEF25Q86VW2 580 aa9.51□□□□□ -0.89
VPS11-201ENST00000524454 LRRC37A3O60309 1634 aa9.51□□□□□ -0.89
VPS11-201ENST00000524454 CRB1P82279 1406 aa9.5□□□□□ -0.89
VPS11-201ENST00000524454 NSD3Q9BZ95 1437 aa9.5□□□□□ -0.89
VPS11-201ENST00000524454 MAP3K13O43283 966 aa9.5□□□□□ -0.89
VPS11-201ENST00000524454 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
VPS11-201ENST00000524454 CHRM1P11229 460 aaPredicted RBP9.5□□□□□ -0.89
VPS11-201ENST00000524454 KCNH5Q8NCM2 988 aa9.5□□□□□ -0.89
VPS11-201ENST00000524454 CARD14Q9BXL6 1004 aa9.5□□□□□ -0.89
VPS11-201ENST00000524454 GGNBP2Q9H3C7 697 aa9.5□□□□□ -0.89
VPS11-201ENST00000524454 PANK3Q9H999 370 aa9.5□□□□□ -0.89
VPS11-201ENST00000524454 KNSTRNQ9Y448 316 aa9.5□□□□□ -0.89
VPS11-201ENST00000524454 PARP4Q9UKK3 1724 aaKnown RBP9.5□□□□□ -0.89
VPS11-201ENST00000524454 TNS1Q9HBL0 1735 aaKnown RBP9.49□□□□□ -0.89
VPS11-201ENST00000524454 CSB-PGBD3P0DP91 1061 aa9.49□□□□□ -0.89
VPS11-201ENST00000524454 AMER1Q5JTC6 1135 aaPredicted RBP9.49□□□□□ -0.89
VPS11-201ENST00000524454 TOM1L2Q6ZVM7 507 aa9.49□□□□□ -0.89
VPS11-201ENST00000524454 MS4A3Q96HJ5 214 aa9.49□□□□□ -0.89
VPS11-201ENST00000524454 RGPD1P0DJD0 1748 aa9.48□□□□□ -0.89
VPS11-201ENST00000524454 PEAK1Q9H792 1746 aa9.48□□□□□ -0.89
VPS11-201ENST00000524454 EP400Q96L91 3159 aa9.48□□□□□ -0.89
VPS11-201ENST00000524454 FYB1O15117 783 aa9.48□□□□□ -0.89
VPS11-201ENST00000524454 GALR2O43603 387 aaPredicted RBP9.48□□□□□ -0.89
VPS11-201ENST00000524454 GABBR2O75899 941 aa9.48□□□□□ -0.89
VPS11-201ENST00000524454 TCP11L2Q8N4U5 519 aa9.48□□□□□ -0.89
VPS11-201ENST00000524454 PNISRQ8TF01 805 aaKnown RBP9.48□□□□□ -0.89
VPS11-201ENST00000524454 RNF25Q96BH1 459 aaPredicted RBP9.48□□□□□ -0.89
VPS11-201ENST00000524454 COG3Q96JB2 828 aa9.48□□□□□ -0.89
VPS11-201ENST00000524454 WDR17Q8IZU2 1322 aa9.48□□□□□ -0.89
VPS11-201ENST00000524454 ANKRD26Q9UPS8 1709 aa9.48□□□□□ -0.89
VPS11-201ENST00000524454 RRS1Q15050 365 aaKnown RBP9.47□□□□□ -0.89
VPS11-201ENST00000524454 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
VPS11-201ENST00000524454 BLMP54132 1417 aaPredicted RBP9.47□□□□□ -0.89
VPS11-201ENST00000524454 ABCC6O95255 1503 aa9.46□□□□□ -0.89
VPS11-201ENST00000524454 BARGINQ6ZT62 677 aa9.46□□□□□ -0.9
VPS11-201ENST00000524454 DEFB132Q7Z7B7 95 aa9.46□□□□□ -0.9
VPS11-201ENST00000524454 ANKRD24Q8TF21 1146 aa9.46□□□□□ -0.9
VPS11-201ENST00000524454 MAP3K19Q56UN5 1328 aa9.46□□□□□ -0.9
VPS11-201ENST00000524454 FAM208AQ9UK61 1670 aaKnown RBP9.45□□□□□ -0.9
VPS11-201ENST00000524454 MAP2P11137 1827 aaKnown RBP9.45□□□□□ -0.9
VPS11-201ENST00000524454 SBF2Q86WG5 1849 aa9.45□□□□□ -0.9
VPS11-201ENST00000524454 ECM2O94769 699 aaPredicted RBP9.45□□□□□ -0.9
VPS11-201ENST00000524454 HNRNPUQ00839 825 aaKnown RBP eCLIP9.45□□□□□ -0.9
VPS11-201ENST00000524454 IFNL1Q8IU54 200 aa9.45□□□□□ -0.9
VPS11-201ENST00000524454 NLRP2Q9NX02 1062 aa9.45□□□□□ -0.9
VPS11-201ENST00000524454 PCDHB13Q9Y5F0 798 aa9.45□□□□□ -0.9
VPS11-201ENST00000524454 GTF3C3Q9Y5Q9 886 aa9.45□□□□□ -0.9
VPS11-201ENST00000524454 ERBB3P21860 1342 aa9.45□□□□□ -0.9
VPS11-201ENST00000524454 AMPHP49418 695 aa9.44□□□□□ -0.9
VPS11-201ENST00000524454 PDE3BQ13370 1112 aa9.44□□□□□ -0.9
VPS11-201ENST00000524454 NGEFQ8N5V2 710 aa9.44□□□□□ -0.9
VPS11-201ENST00000524454 THRAP3Q9Y2W1 955 aaKnown RBP9.44□□□□□ -0.9
VPS11-201ENST00000524454 CGNL1Q0VF96 1302 aa9.44□□□□□ -0.9
VPS11-201ENST00000524454 DISP2A7MBM2 1401 aa9.44□□□□□ -0.9
VPS11-201ENST00000524454 RGL2O15211 777 aa9.43□□□□□ -0.9
VPS11-201ENST00000524454 TRIM37O94972 964 aa9.43□□□□□ -0.9
VPS11-201ENST00000524454 HOXC9P31274 260 aa9.43□□□□□ -0.9
VPS11-201ENST00000524454 TNNT2P45379 298 aaPredicted RBP9.43□□□□□ -0.9
VPS11-201ENST00000524454 IP6K1Q92551 441 aa9.43□□□□□ -0.9
VPS11-201ENST00000524454 SGIP1Q9BQI5 828 aa9.43□□□□□ -0.9
VPS11-201ENST00000524454 CARD10Q9BWT7 1032 aa9.43□□□□□ -0.9
VPS11-201ENST00000524454 TRPC6Q9Y210 931 aa9.43□□□□□ -0.9
VPS11-201ENST00000524454 EMILIN1Q9Y6C2 1016 aa9.43□□□□□ -0.9
VPS11-201ENST00000524454 SMG6Q86US8 1419 aaKnown RBP9.42□□□□□ -0.9
VPS11-201ENST00000524454 SF3B2Q13435 895 aaKnown RBP9.42□□□□□ -0.9
VPS11-201ENST00000524454 DDB1Q16531 1140 aa9.42□□□□□ -0.9
VPS11-201ENST00000524454 CCDC184Q52MB2 194 aa9.42□□□□□ -0.9
VPS11-201ENST00000524454 ERICH6BQ5W0A0 696 aa9.42□□□□□ -0.9
VPS11-201ENST00000524454 USHBP1Q8N6Y0 703 aa9.42□□□□□ -0.9
VPS11-201ENST00000524454 PCDHB8Q9UN66 801 aa9.42□□□□□ -0.9
VPS11-201ENST00000524454 SHANK3Q9BYB0 1731 aa9.42□□□□□ -0.9
VPS11-201ENST00000524454 PPM1GO15355 546 aaPredicted RBP9.41□□□□□ -0.9
VPS11-201ENST00000524454 PPP2R1AP30153 589 aa9.41□□□□□ -0.9
VPS11-201ENST00000524454 EN1Q05925 392 aaPredicted RBP9.41□□□□□ -0.9
VPS11-201ENST00000524454 CNGB1Q14028 1251 aaPredicted RBP9.41□□□□□ -0.9
VPS11-201ENST00000524454 MARCH10Q8NA82 808 aaPredicted RBP9.41□□□□□ -0.9
VPS11-201ENST00000524454 TNS2Q63HR2 1409 aa9.4□□□□□ -0.9
VPS11-201ENST00000524454 CLCN6P51797 869 aa9.4□□□□□ -0.9
VPS11-201ENST00000524454 HSP90AB2PQ58FF8 381 aa9.4□□□□□ -0.9
VPS11-201ENST00000524454 FAM196AQ6ZSG2 479 aa9.4□□□□□ -0.9
VPS11-201ENST00000524454 PTF1AQ7RTS3 328 aa9.4□□□□□ -0.9
VPS11-201ENST00000524454 CCDC125Q86Z20 511 aa9.4□□□□□ -0.9
VPS11-201ENST00000524454 FAM9BQ8IZU0 186 aa9.4□□□□□ -0.9
VPS11-201ENST00000524454 OVOS2A0A0G2JMS6 1433 aa9.39□□□□□ -0.91
VPS11-201ENST00000524454 NUP188Q5SRE5 1749 aa9.39□□□□□ -0.91
VPS11-201ENST00000524454 RTL1A6NKG5 1358 aa9.39□□□□□ -0.91
VPS11-201ENST00000524454 RREB1Q92766 1687 aa9.39□□□□□ -0.91
VPS11-201ENST00000524454 BAG6P46379 1132 aa9.39□□□□□ -0.91
VPS11-201ENST00000524454 EZH2Q15910 746 aaKnown RBP9.39□□□□□ -0.91
VPS11-201ENST00000524454 MEGF6O75095 1541 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms