RNA–Protein interactions for RNA: ENST00000524347.2

SGCD-204, Transcript of sarcoglycan delta, humanhuman

TSL 5

Gene SGCD, Length 739 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCD-204ENST00000524347 IL2RBP14784 551 aa17.29■□□□□ 0.36
SGCD-204ENST00000524347 SHANK3Q9BYB0 1731 aa17.29■□□□□ 0.36
SGCD-204ENST00000524347 KCNQ2O43526 872 aa17.28■□□□□ 0.36
SGCD-204ENST00000524347 USHBP1Q8N6Y0 703 aa17.28■□□□□ 0.36
SGCD-204ENST00000524347 PNISRQ8TF01 805 aaKnown RBP17.28■□□□□ 0.36
SGCD-204ENST00000524347 MEGF6O75095 1541 aa17.27■□□□□ 0.36
SGCD-204ENST00000524347 NHSQ6T4R5 1651 aa17.27■□□□□ 0.36
SGCD-204ENST00000524347 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
SGCD-204ENST00000524347 HSP90AB2PQ58FF8 381 aa17.27■□□□□ 0.36
SGCD-204ENST00000524347 ACSBG1Q96GR2 724 aa17.27■□□□□ 0.36
SGCD-204ENST00000524347 EMILIN1Q9Y6C2 1016 aa17.27■□□□□ 0.36
SGCD-204ENST00000524347 RTL1A6NKG5 1358 aa17.27■□□□□ 0.35
SGCD-204ENST00000524347 RGPD3A6NKT7 1758 aaPredicted RBP17.26■□□□□ 0.35
SGCD-204ENST00000524347 RGPD4Q7Z3J3 1758 aa17.26■□□□□ 0.35
SGCD-204ENST00000524347 KAT6BQ8WYB5 2073 aa17.26■□□□□ 0.35
SGCD-204ENST00000524347 BCL9O00512 1426 aa17.26■□□□□ 0.35
SGCD-204ENST00000524347 NBPF6Q5VWK0 638 aa17.25■□□□□ 0.35
SGCD-204ENST00000524347 NBPF4Q96M43 638 aa17.25■□□□□ 0.35
SGCD-204ENST00000524347 POLKQ9UBT6 870 aa17.25■□□□□ 0.35
SGCD-204ENST00000524347 MTHFSP49914 203 aa17.24■□□□□ 0.35
SGCD-204ENST00000524347 BCL11BQ9C0K0 894 aaPredicted RBP17.24■□□□□ 0.35
SGCD-204ENST00000524347 LRP5O75197 1615 aa17.24■□□□□ 0.35
SGCD-204ENST00000524347 KIF24Q5T7B8 1368 aa17.24■□□□□ 0.35
SGCD-204ENST00000524347 BTAF1O14981 1849 aa17.24■□□□□ 0.35
SGCD-204ENST00000524347 PROM2Q8N271 834 aa17.23■□□□□ 0.35
SGCD-204ENST00000524347 FLT4P35916 1363 aa17.23■□□□□ 0.35
SGCD-204ENST00000524347 DOT1LQ8TEK3 1739 aa17.22■□□□□ 0.35
SGCD-204ENST00000524347 PPM1GO15355 546 aaPredicted RBP17.22■□□□□ 0.35
SGCD-204ENST00000524347 DDX54Q8TDD1 881 aaKnown RBP17.22■□□□□ 0.35
SGCD-204ENST00000524347 ANO8Q9HCE9 1232 aaPredicted RBP17.21■□□□□ 0.35
SGCD-204ENST00000524347 PLSCR1O15162 318 aa17.19■□□□□ 0.34
SGCD-204ENST00000524347 FAM9BQ8IZU0 186 aa17.18■□□□□ 0.34
SGCD-204ENST00000524347 CFAP53Q96M91 514 aa17.17■□□□□ 0.34
SGCD-204ENST00000524347 PDGFDQ9GZP0 370 aaPredicted RBP17.17■□□□□ 0.34
SGCD-204ENST00000524347 TXNRD1Q16881 649 aa17.16■□□□□ 0.34
SGCD-204ENST00000524347 NCAPD2Q15021 1401 aa17.15■□□□□ 0.34
SGCD-204ENST00000524347 ZCRB1Q8TBF4 217 aaKnown RBP17.15■□□□□ 0.34
SGCD-204ENST00000524347 CASZ1Q86V15 1759 aa17.15■□□□□ 0.34
SGCD-204ENST00000524347 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
SGCD-204ENST00000524347 TOGARAM1Q9Y4F4 1720 aa17.14■□□□□ 0.33
SGCD-204ENST00000524347 NBPF14Q5TI25 921 aa17.14■□□□□ 0.33
SGCD-204ENST00000524347 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
SGCD-204ENST00000524347 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
SGCD-204ENST00000524347 IL13P35225 146 aa17.13■□□□□ 0.33
SGCD-204ENST00000524347 RAPGEF4Q8WZA2 1011 aa17.13■□□□□ 0.33
SGCD-204ENST00000524347 SYTL4Q96C24 671 aaPredicted RBP17.13■□□□□ 0.33
SGCD-204ENST00000524347 PRIM1P49642 420 aaKnown RBP17.12■□□□□ 0.33
SGCD-204ENST00000524347 KCNQ4P56696 695 aa17.12■□□□□ 0.33
SGCD-204ENST00000524347 WDR43Q15061 677 aaKnown RBP eCLIP17.12■□□□□ 0.33
SGCD-204ENST00000524347 EYA1Q99502 592 aa17.12■□□□□ 0.33
SGCD-204ENST00000524347 ADAMTS8Q9UP79 889 aa17.12■□□□□ 0.33
SGCD-204ENST00000524347 DIAPH1O60610 1272 aaKnown RBP17.11■□□□□ 0.33
SGCD-204ENST00000524347 TATP17735 454 aaPredicted RBP17.11■□□□□ 0.33
SGCD-204ENST00000524347 EIF4A2Q14240 407 aaKnown RBP17.11■□□□□ 0.33
SGCD-204ENST00000524347 LRRC4BQ9NT99 713 aa17.11■□□□□ 0.33
SGCD-204ENST00000524347 CYP27B1O15528 508 aa17.09■□□□□ 0.33
SGCD-204ENST00000524347 KDRP35968 1356 aa17.09■□□□□ 0.33
SGCD-204ENST00000524347 LY75O60449 1722 aa17.09■□□□□ 0.33
SGCD-204ENST00000524347 DLG5Q8TDM6 1919 aa17.09■□□□□ 0.33
SGCD-204ENST00000524347 ZBED9Q6R2W3 1325 aa17.08■□□□□ 0.32
SGCD-204ENST00000524347 ZNF827Q17R98 1081 aa17.08■□□□□ 0.32
SGCD-204ENST00000524347 ITGB4P16144 1822 aa17.07■□□□□ 0.32
SGCD-204ENST00000524347 TUBGCP6Q96RT7 1819 aa17.07■□□□□ 0.32
SGCD-204ENST00000524347 IGSF1Q8N6C5 1336 aa17.07■□□□□ 0.32
SGCD-204ENST00000524347 HNRNPUQ00839 825 aaKnown RBP eCLIP17.07■□□□□ 0.32
SGCD-204ENST00000524347 PCDH11XQ9BZA7 1347 aa17.06■□□□□ 0.32
SGCD-204ENST00000524347 PCDH11YQ9BZA8 1340 aa17.06■□□□□ 0.32
SGCD-204ENST00000524347 SLC15A2Q16348 729 aa17.06■□□□□ 0.32
SGCD-204ENST00000524347 RSPH6AQ9H0K4 717 aa17.06■□□□□ 0.32
SGCD-204ENST00000524347 STK32BQ9NY57 414 aa17.06■□□□□ 0.32
SGCD-204ENST00000524347 ZBTB7AO95365 584 aa17.05■□□□□ 0.32
SGCD-204ENST00000524347 PLEKHF1Q96S99 279 aa17.05■□□□□ 0.32
SGCD-204ENST00000524347 NUDCQ9Y266 331 aa17.05■□□□□ 0.32
SGCD-204ENST00000524347 U2AF1L5P0DN76 240 aaPredicted RBP17.03■□□□□ 0.32
SGCD-204ENST00000524347 U2AF1Q01081 240 aaKnown RBP eCLIP17.03■□□□□ 0.32
SGCD-204ENST00000524347 AEBP1Q8IUX7 1158 aa17.03■□□□□ 0.32
SGCD-204ENST00000524347 CCDC146Q8IYE0 955 aa17.03■□□□□ 0.32
SGCD-204ENST00000524347 U2SURPO15042 1029 aaKnown RBP17.02■□□□□ 0.32
SGCD-204ENST00000524347 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
SGCD-204ENST00000524347 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
SGCD-204ENST00000524347 SPON1Q9HCB6 807 aa17.01■□□□□ 0.31
SGCD-204ENST00000524347 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
SGCD-204ENST00000524347 AKT1S1Q96B36 256 aa17■□□□□ 0.31
SGCD-204ENST00000524347 RUNDC1Q96C34 613 aa17■□□□□ 0.31
SGCD-204ENST00000524347 TAF1LQ8IZX4 1826 aa16.99■□□□□ 0.31
SGCD-204ENST00000524347 FCHSD2O94868 740 aa16.99■□□□□ 0.31
SGCD-204ENST00000524347 PTGER2P43116 358 aa16.99■□□□□ 0.31
SGCD-204ENST00000524347 CCNL1Q9UK58 526 aaPredicted RBP16.99■□□□□ 0.31
SGCD-204ENST00000524347 SPG7Q9UQ90 795 aa16.99■□□□□ 0.31
SGCD-204ENST00000524347 C5P01031 1676 aa16.99■□□□□ 0.31
SGCD-204ENST00000524347 ADAMTS7Q9UKP4 1686 aa16.99■□□□□ 0.31
SGCD-204ENST00000524347 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
SGCD-204ENST00000524347 VIRMAQ69YN4 1812 aaKnown RBP16.98■□□□□ 0.31
SGCD-204ENST00000524347 PHKG2P15735 406 aa16.98■□□□□ 0.31
SGCD-204ENST00000524347 PRKAR2BP31323 418 aa16.98■□□□□ 0.31
SGCD-204ENST00000524347 PALLDQ8WX93 1383 aa16.98■□□□□ 0.31
SGCD-204ENST00000524347 HMOX1P09601 288 aa16.97■□□□□ 0.31
SGCD-204ENST00000524347 NKX1-1Q15270 411 aaPredicted RBP16.97■□□□□ 0.31
SGCD-204ENST00000524347 SLC27A3Q5K4L6 730 aa16.97■□□□□ 0.31
SGCD-204ENST00000524347 PIGBQ92521 554 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms