RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 INSRP06213 1382 aa16.45■□□□□ 0.22
SPARC-206ENST00000524277 FLT4P35916 1363 aa16.44■□□□□ 0.22
SPARC-206ENST00000524277 TATP17735 454 aaPredicted RBP16.44■□□□□ 0.22
SPARC-206ENST00000524277 SYTL4Q96C24 671 aaPredicted RBP16.44■□□□□ 0.22
SPARC-206ENST00000524277 LRRC4BQ9NT99 713 aa16.44■□□□□ 0.22
SPARC-206ENST00000524277 BTAF1O14981 1849 aa16.44■□□□□ 0.22
SPARC-206ENST00000524277 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
SPARC-206ENST00000524277 SGIP1Q9BQI5 828 aa16.43■□□□□ 0.22
SPARC-206ENST00000524277 SYT17Q9BSW7 474 aa16.42■□□□□ 0.22
SPARC-206ENST00000524277 PAPPAQ13219 1627 aa16.41■□□□□ 0.22
SPARC-206ENST00000524277 ZNF827Q17R98 1081 aa16.41■□□□□ 0.22
SPARC-206ENST00000524277 HSP90AB2PQ58FF8 381 aa16.41■□□□□ 0.22
SPARC-206ENST00000524277 ARXQ96QS3 562 aa16.41■□□□□ 0.22
SPARC-206ENST00000524277 CARD14Q9BXL6 1004 aa16.41■□□□□ 0.22
SPARC-206ENST00000524277 FHDC1Q9C0D6 1143 aaPredicted RBP16.41■□□□□ 0.22
SPARC-206ENST00000524277 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
SPARC-206ENST00000524277 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
SPARC-206ENST00000524277 MEGF6O75095 1541 aa16.4■□□□□ 0.22
SPARC-206ENST00000524277 MAP3K5Q99683 1374 aa16.4■□□□□ 0.22
SPARC-206ENST00000524277 TFCP2L1Q9NZI6 479 aa16.4■□□□□ 0.22
SPARC-206ENST00000524277 POLD1P28340 1107 aa16.39■□□□□ 0.21
SPARC-206ENST00000524277 NSD2O96028 1365 aa16.38■□□□□ 0.21
SPARC-206ENST00000524277 NSD3Q9BZ95 1437 aa16.38■□□□□ 0.21
SPARC-206ENST00000524277 USHBP1Q8N6Y0 703 aa16.38■□□□□ 0.21
SPARC-206ENST00000524277 CCNL1Q9UK58 526 aaPredicted RBP16.38■□□□□ 0.21
SPARC-206ENST00000524277 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
SPARC-206ENST00000524277 KIF20BQ96Q89 1820 aa16.37■□□□□ 0.21
SPARC-206ENST00000524277 WASHC2AQ641Q2 1341 aa16.37■□□□□ 0.21
SPARC-206ENST00000524277 MYOM1P52179 1685 aa16.37■□□□□ 0.21
SPARC-206ENST00000524277 PNPLA7Q6ZV29 1317 aa16.36■□□□□ 0.21
SPARC-206ENST00000524277 RGPD2P0DJD1 1756 aa16.36■□□□□ 0.21
SPARC-206ENST00000524277 FLAD1Q8NFF5 587 aa16.35■□□□□ 0.21
SPARC-206ENST00000524277 SMARCC1Q92922 1105 aaPredicted RBP16.35■□□□□ 0.21
SPARC-206ENST00000524277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.35■□□□□ 0.21
SPARC-206ENST00000524277 SPG7Q9UQ90 795 aa16.35■□□□□ 0.21
SPARC-206ENST00000524277 EMILIN1Q9Y6C2 1016 aa16.35■□□□□ 0.21
SPARC-206ENST00000524277 QSER1Q2KHR3 1735 aa16.34■□□□□ 0.21
SPARC-206ENST00000524277 EIF4G2P78344 907 aaKnown RBP eCLIP16.34■□□□□ 0.21
SPARC-206ENST00000524277 LY75O60449 1722 aa16.33■□□□□ 0.21
SPARC-206ENST00000524277 DOT1LQ8TEK3 1739 aa16.33■□□□□ 0.21
SPARC-206ENST00000524277 PPM1GO15355 546 aaPredicted RBP16.33■□□□□ 0.2
SPARC-206ENST00000524277 NKX1-1Q15270 411 aaPredicted RBP16.33■□□□□ 0.2
SPARC-206ENST00000524277 SHANK3Q9BYB0 1731 aa16.33■□□□□ 0.2
SPARC-206ENST00000524277 CYP27B1O15528 508 aa16.32■□□□□ 0.2
SPARC-206ENST00000524277 NCAPD2Q15021 1401 aa16.32■□□□□ 0.2
SPARC-206ENST00000524277 PLEKHG2Q9H7P9 1386 aa16.32■□□□□ 0.2
SPARC-206ENST00000524277 KCNQ4P56696 695 aa16.31■□□□□ 0.2
SPARC-206ENST00000524277 MPRIPQ6WCQ1 1025 aa16.31■□□□□ 0.2
SPARC-206ENST00000524277 POLKQ9UBT6 870 aa16.31■□□□□ 0.2
SPARC-206ENST00000524277 EYA1Q99502 592 aa16.3■□□□□ 0.2
SPARC-206ENST00000524277 PALLDQ8WX93 1383 aa16.29■□□□□ 0.2
SPARC-206ENST00000524277 POLR3GLQ9BT43 218 aa16.29■□□□□ 0.2
SPARC-206ENST00000524277 MSH5O43196 834 aa16.28■□□□□ 0.2
SPARC-206ENST00000524277 GPR162Q16538 588 aa16.28■□□□□ 0.2
SPARC-206ENST00000524277 COL23A1Q86Y22 540 aaPredicted RBP16.28■□□□□ 0.2
SPARC-206ENST00000524277 IFNL2Q8IZJ0 200 aa16.28■□□□□ 0.2
SPARC-206ENST00000524277 COL24A1Q17RW2 1714 aa16.27■□□□□ 0.19
SPARC-206ENST00000524277 ANKRD26Q9UPS8 1709 aa16.26■□□□□ 0.19
SPARC-206ENST00000524277 HSPA5P11021 654 aaKnown RBP16.26■□□□□ 0.19
SPARC-206ENST00000524277 PIGBQ92521 554 aa16.26■□□□□ 0.19
SPARC-206ENST00000524277 PKD1L3Q7Z443 1732 aa16.25■□□□□ 0.19
SPARC-206ENST00000524277 UTRNP46939 3433 aa16.25■□□□□ 0.19
SPARC-206ENST00000524277 MAP2P11137 1827 aaKnown RBP16.25■□□□□ 0.19
SPARC-206ENST00000524277 KLHL34Q8N239 644 aa16.25■□□□□ 0.19
SPARC-206ENST00000524277 CCER1Q8TC90 406 aaPredicted RBP16.25■□□□□ 0.19
SPARC-206ENST00000524277 AK7Q96M32 723 aa16.25■□□□□ 0.19
SPARC-206ENST00000524277 PANK3Q9H999 370 aa16.25■□□□□ 0.19
SPARC-206ENST00000524277 TMOD3Q9NYL9 352 aa16.25■□□□□ 0.19
SPARC-206ENST00000524277 HSP90AB1P08238 724 aaKnown RBP16.24■□□□□ 0.19
SPARC-206ENST00000524277 PHKG2P15735 406 aa16.24■□□□□ 0.19
SPARC-206ENST00000524277 EIF4A2Q14240 407 aaKnown RBP16.24■□□□□ 0.19
SPARC-206ENST00000524277 ZNF784Q8NCA9 323 aaPredicted RBP16.24■□□□□ 0.19
SPARC-206ENST00000524277 GRIN3BO60391 1043 aa16.23■□□□□ 0.19
SPARC-206ENST00000524277 CD2APQ9Y5K6 639 aa16.23■□□□□ 0.19
SPARC-206ENST00000524277 CHD4Q14839 1912 aa16.22■□□□□ 0.19
SPARC-206ENST00000524277 LOC102724428A0A0B4J2F2 783 aa16.22■□□□□ 0.19
SPARC-206ENST00000524277 ERVV-2B6SEH9 535 aa16.22■□□□□ 0.19
SPARC-206ENST00000524277 TNNT2P45379 298 aaPredicted RBP16.22■□□□□ 0.19
SPARC-206ENST00000524277 SIK1P57059 783 aa16.22■□□□□ 0.19
SPARC-206ENST00000524277 AMOTQ4VCS5 1084 aa16.22■□□□□ 0.19
SPARC-206ENST00000524277 TUBGCP6Q96RT7 1819 aa16.22■□□□□ 0.19
SPARC-206ENST00000524277 IGSF1Q8N6C5 1336 aa16.21■□□□□ 0.19
SPARC-206ENST00000524277 SSFA2P28290 1259 aa16.21■□□□□ 0.19
SPARC-206ENST00000524277 PLEKHO1Q53GL0 409 aaPredicted RBP16.21■□□□□ 0.19
SPARC-206ENST00000524277 KNSTRNQ9Y448 316 aa16.21■□□□□ 0.19
SPARC-206ENST00000524277 C5P01031 1676 aa16.21■□□□□ 0.18
SPARC-206ENST00000524277 MORC1Q86VD1 984 aa16.2■□□□□ 0.18
SPARC-206ENST00000524277 ITGB4P16144 1822 aa16.19■□□□□ 0.18
SPARC-206ENST00000524277 NLGN2Q8NFZ4 835 aa16.19■□□□□ 0.18
SPARC-206ENST00000524277 DCAF5Q96JK2 942 aa16.19■□□□□ 0.18
SPARC-206ENST00000524277 TAF1LQ8IZX4 1826 aa16.18■□□□□ 0.18
SPARC-206ENST00000524277 ATP6V1AP38606 617 aa16.18■□□□□ 0.18
SPARC-206ENST00000524277 MSL1Q68DK7 614 aa16.18■□□□□ 0.18
SPARC-206ENST00000524277 PELP1Q8IZL8 1130 aaKnown RBP16.18■□□□□ 0.18
SPARC-206ENST00000524277 ASAP1Q9ULH1 1129 aa16.18■□□□□ 0.18
SPARC-206ENST00000524277 TOGARAM1Q9Y4F4 1720 aa16.18■□□□□ 0.18
SPARC-206ENST00000524277 C4BP0C0L5 1744 aa16.17■□□□□ 0.18
SPARC-206ENST00000524277 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.17■□□□□ 0.18
SPARC-206ENST00000524277 ATG3Q9NT62 314 aa16.17■□□□□ 0.18
SPARC-206ENST00000524277 LINC00116Q8NCU8 138 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms