RNA–Protein interactions for RNA: ENST00000523262.5

CSGALNACT1-213, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-213ENST00000523262 RTL1A6NKG5 1358 aa22.24■■□□□ 1.15
CSGALNACT1-213ENST00000523262 GPR162Q16538 588 aa22.23■■□□□ 1.15
CSGALNACT1-213ENST00000523262 KCNQ4P56696 695 aa22.22■■□□□ 1.15
CSGALNACT1-213ENST00000523262 RRS1Q15050 365 aaKnown RBP22.22■■□□□ 1.15
CSGALNACT1-213ENST00000523262 RAPGEF4Q8WZA2 1011 aa22.22■■□□□ 1.15
CSGALNACT1-213ENST00000523262 PNPLA7Q6ZV29 1317 aa22.22■■□□□ 1.15
CSGALNACT1-213ENST00000523262 SMG6Q86US8 1419 aaKnown RBP22.22■■□□□ 1.15
CSGALNACT1-213ENST00000523262 GGNBP2Q9H3C7 697 aa22.21■■□□□ 1.15
CSGALNACT1-213ENST00000523262 CCNL1Q9UK58 526 aaPredicted RBP22.21■■□□□ 1.15
CSGALNACT1-213ENST00000523262 CGNL1Q0VF96 1302 aa22.21■■□□□ 1.15
CSGALNACT1-213ENST00000523262 FYB1O15117 783 aa22.2■■□□□ 1.14
CSGALNACT1-213ENST00000523262 NBPF6Q5VWK0 638 aa22.2■■□□□ 1.14
CSGALNACT1-213ENST00000523262 NBPF4Q96M43 638 aa22.2■■□□□ 1.14
CSGALNACT1-213ENST00000523262 MEGF6O75095 1541 aa22.2■■□□□ 1.14
CSGALNACT1-213ENST00000523262 MSH5O43196 834 aa22.19■■□□□ 1.14
CSGALNACT1-213ENST00000523262 CDCA8Q53HL2 280 aa22.19■■□□□ 1.14
CSGALNACT1-213ENST00000523262 USP47Q96K76 1375 aa22.19■■□□□ 1.14
CSGALNACT1-213ENST00000523262 TATP17735 454 aaPredicted RBP22.18■■□□□ 1.14
CSGALNACT1-213ENST00000523262 PELP1Q8IZL8 1130 aaKnown RBP22.18■■□□□ 1.14
CSGALNACT1-213ENST00000523262 USHBP1Q8N6Y0 703 aa22.18■■□□□ 1.14
CSGALNACT1-213ENST00000523262 NSD2O96028 1365 aa22.17■■□□□ 1.14
CSGALNACT1-213ENST00000523262 DOT1LQ8TEK3 1739 aa22.17■■□□□ 1.14
CSGALNACT1-213ENST00000523262 HMGB2P26583 209 aaKnown RBP22.16■■□□□ 1.14
CSGALNACT1-213ENST00000523262 QSER1Q2KHR3 1735 aa22.15■■□□□ 1.14
CSGALNACT1-213ENST00000523262 CHD4Q14839 1912 aa22.14■■□□□ 1.13
CSGALNACT1-213ENST00000523262 PCDH11XQ9BZA7 1347 aa22.13■■□□□ 1.13
CSGALNACT1-213ENST00000523262 PCDH11YQ9BZA8 1340 aa22.13■■□□□ 1.13
CSGALNACT1-213ENST00000523262 RGPD2P0DJD1 1756 aa22.13■■□□□ 1.13
CSGALNACT1-213ENST00000523262 HSP90AB2PQ58FF8 381 aa22.13■■□□□ 1.13
CSGALNACT1-213ENST00000523262 INSRP06213 1382 aa22.12■■□□□ 1.13
CSGALNACT1-213ENST00000523262 FLT4P35916 1363 aa22.12■■□□□ 1.13
CSGALNACT1-213ENST00000523262 LY75O60449 1722 aa22.11■■□□□ 1.13
CSGALNACT1-213ENST00000523262 UTRNP46939 3433 aa22.11■■□□□ 1.13
CSGALNACT1-213ENST00000523262 KIF24Q5T7B8 1368 aa22.11■■□□□ 1.13
CSGALNACT1-213ENST00000523262 COL23A1Q86Y22 540 aaPredicted RBP22.1■■□□□ 1.13
CSGALNACT1-213ENST00000523262 SHANK3Q9BYB0 1731 aa22.1■■□□□ 1.13
CSGALNACT1-213ENST00000523262 NLGN2Q8NFZ4 835 aa22.09■■□□□ 1.13
CSGALNACT1-213ENST00000523262 MPRIPQ6WCQ1 1025 aa22.08■■□□□ 1.13
CSGALNACT1-213ENST00000523262 FLAD1Q8NFF5 587 aa22.08■■□□□ 1.13
CSGALNACT1-213ENST00000523262 GRIN3BO60391 1043 aa22.07■■□□□ 1.12
CSGALNACT1-213ENST00000523262 C1QTNF8P60827 252 aa22.07■■□□□ 1.12
CSGALNACT1-213ENST00000523262 MSL1Q68DK7 614 aa22.07■■□□□ 1.12
CSGALNACT1-213ENST00000523262 TUBGCP6Q96RT7 1819 aa22.07■■□□□ 1.12
CSGALNACT1-213ENST00000523262 SENP3-EIF4A1A0A087X0R7 540 aa22.06■■□□□ 1.12
CSGALNACT1-213ENST00000523262 PPM1GO15355 546 aaPredicted RBP22.06■■□□□ 1.12
CSGALNACT1-213ENST00000523262 SMARCC1Q92922 1105 aaPredicted RBP22.06■■□□□ 1.12
CSGALNACT1-213ENST00000523262 PALLDQ8WX93 1383 aa22.06■■□□□ 1.12
CSGALNACT1-213ENST00000523262 COL24A1Q17RW2 1714 aa22.06■■□□□ 1.12
CSGALNACT1-213ENST00000523262 CYP27B1O15528 508 aa22.04■■□□□ 1.12
CSGALNACT1-213ENST00000523262 EMILIN1Q9Y6C2 1016 aa22.04■■□□□ 1.12
CSGALNACT1-213ENST00000523262 NSD3Q9BZ95 1437 aa22.04■■□□□ 1.12
CSGALNACT1-213ENST00000523262 GIGYF1O75420 1035 aaPredicted RBP22.03■■□□□ 1.12
CSGALNACT1-213ENST00000523262 TRIM26Q12899 539 aaPredicted RBP22.03■■□□□ 1.12
CSGALNACT1-213ENST00000523262 CARD14Q9BXL6 1004 aa22.03■■□□□ 1.12
CSGALNACT1-213ENST00000523262 KIF20BQ96Q89 1820 aa22.03■■□□□ 1.12
CSGALNACT1-213ENST00000523262 AK7Q96M32 723 aa22.02■■□□□ 1.12
CSGALNACT1-213ENST00000523262 SPG7Q9UQ90 795 aa22.02■■□□□ 1.12
CSGALNACT1-213ENST00000523262 YBX3P16989 372 aaKnown RBP eCLIP22■■□□□ 1.11
CSGALNACT1-213ENST00000523262 CD2APQ9Y5K6 639 aa22■■□□□ 1.11
CSGALNACT1-213ENST00000523262 C5P01031 1676 aa21.99■■□□□ 1.11
CSGALNACT1-213ENST00000523262 PIGBQ92521 554 aa21.98■■□□□ 1.11
CSGALNACT1-213ENST00000523262 NKX1-1Q15270 411 aaPredicted RBP21.97■■□□□ 1.11
CSGALNACT1-213ENST00000523262 WASHC2AQ641Q2 1341 aa21.97■■□□□ 1.11
CSGALNACT1-213ENST00000523262 PHF14O94880 888 aa21.96■■□□□ 1.11
CSGALNACT1-213ENST00000523262 EYA1Q99502 592 aa21.95■■□□□ 1.1
CSGALNACT1-213ENST00000523262 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.95■■□□□ 1.1
CSGALNACT1-213ENST00000523262 TMOD3Q9NYL9 352 aa21.95■■□□□ 1.1
CSGALNACT1-213ENST00000523262 TIMELESSQ9UNS1 1208 aa21.95■■□□□ 1.1
CSGALNACT1-213ENST00000523262 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.94■■□□□ 1.1
CSGALNACT1-213ENST00000523262 POLR3GLQ9BT43 218 aa21.94■■□□□ 1.1
CSGALNACT1-213ENST00000523262 LOC102724428A0A0B4J2F2 783 aa21.93■■□□□ 1.1
CSGALNACT1-213ENST00000523262 C4BP0C0L5 1744 aa21.93■■□□□ 1.1
CSGALNACT1-213ENST00000523262 SIK1P57059 783 aa21.93■■□□□ 1.1
CSGALNACT1-213ENST00000523262 NCAPD2Q15021 1401 aa21.93■■□□□ 1.1
CSGALNACT1-213ENST00000523262 PKD1L3Q7Z443 1732 aa21.92■■□□□ 1.1
CSGALNACT1-213ENST00000523262 SSFA2P28290 1259 aa21.92■■□□□ 1.1
CSGALNACT1-213ENST00000523262 IFNL2Q8IZJ0 200 aa21.92■■□□□ 1.1
CSGALNACT1-213ENST00000523262 TAF1LQ8IZX4 1826 aa21.92■■□□□ 1.1
CSGALNACT1-213ENST00000523262 GOLGB1Q14789 3259 aaKnown RBP21.91■■□□□ 1.1
CSGALNACT1-213ENST00000523262 POLKQ9UBT6 870 aa21.91■■□□□ 1.1
CSGALNACT1-213ENST00000523262 TOGARAM1Q9Y4F4 1720 aa21.91■■□□□ 1.1
CSGALNACT1-213ENST00000523262 ITGB4P16144 1822 aa21.9■■□□□ 1.1
CSGALNACT1-213ENST00000523262 PHKG2P15735 406 aa21.89■■□□□ 1.09
CSGALNACT1-213ENST00000523262 ATP6V1AP38606 617 aa21.89■■□□□ 1.09
CSGALNACT1-213ENST00000523262 TNNT2P45379 298 aaPredicted RBP21.89■■□□□ 1.09
CSGALNACT1-213ENST00000523262 AMIGO3Q86WK7 504 aa21.89■■□□□ 1.09
CSGALNACT1-213ENST00000523262 LINC00116Q8NCU8 138 aa21.89■■□□□ 1.09
CSGALNACT1-213ENST00000523262 ASAP1Q9ULH1 1129 aa21.89■■□□□ 1.09
CSGALNACT1-213ENST00000523262 GNPATO15228 680 aa21.88■■□□□ 1.09
CSGALNACT1-213ENST00000523262 SMIM5Q71RC9 77 aa21.88■■□□□ 1.09
CSGALNACT1-213ENST00000523262 ATP10DQ9P241 1426 aa21.87■■□□□ 1.09
CSGALNACT1-213ENST00000523262 IGSF1Q8N6C5 1336 aa21.86■■□□□ 1.09
CSGALNACT1-213ENST00000523262 EIF4A2Q14240 407 aaKnown RBP21.86■■□□□ 1.09
CSGALNACT1-213ENST00000523262 GPBP1L1Q9HC44 474 aaPredicted RBP21.86■■□□□ 1.09
CSGALNACT1-213ENST00000523262 ANKRD26Q9UPS8 1709 aa21.86■■□□□ 1.09
CSGALNACT1-213ENST00000523262 MAP2P11137 1827 aaKnown RBP21.85■■□□□ 1.09
CSGALNACT1-213ENST00000523262 ITPK1Q13572 414 aa21.85■■□□□ 1.09
CSGALNACT1-213ENST00000523262 ATG3Q9NT62 314 aa21.84■■□□□ 1.09
CSGALNACT1-213ENST00000523262 WWC3Q9ULE0 1092 aa21.84■■□□□ 1.09
CSGALNACT1-213ENST00000523262 UBR3Q6ZT12 1888 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms