RNA–Protein interactions for RNA: ENST00000523147.5

PTP4A3-205, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5

Gene PTP4A3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-205ENST00000523147 PROM2Q8N271 834 aa28.81■■■□□ 2.2
PTP4A3-205ENST00000523147 KAT6BQ8WYB5 2073 aa28.81■■■□□ 2.2
PTP4A3-205ENST00000523147 MEGF6O75095 1541 aa28.8■■■□□ 2.2
PTP4A3-205ENST00000523147 SYTL4Q96C24 671 aaPredicted RBP28.79■■■□□ 2.2
PTP4A3-205ENST00000523147 MAP2P11137 1827 aaKnown RBP28.76■■■□□ 2.19
PTP4A3-205ENST00000523147 WASHC2AQ641Q2 1341 aa28.76■■■□□ 2.19
PTP4A3-205ENST00000523147 STK32BQ9NY57 414 aa28.76■■■□□ 2.19
PTP4A3-205ENST00000523147 POLKQ9UBT6 870 aa28.76■■■□□ 2.19
PTP4A3-205ENST00000523147 ANKRD26Q9UPS8 1709 aa28.75■■■□□ 2.19
PTP4A3-205ENST00000523147 ANO8Q9HCE9 1232 aaPredicted RBP28.75■■■□□ 2.19
PTP4A3-205ENST00000523147 BTAF1O14981 1849 aa28.74■■■□□ 2.19
PTP4A3-205ENST00000523147 KNSTRNQ9Y448 316 aa28.74■■■□□ 2.19
PTP4A3-205ENST00000523147 PRIM1P49642 420 aaKnown RBP28.73■■■□□ 2.19
PTP4A3-205ENST00000523147 NSD2O96028 1365 aa28.73■■■□□ 2.19
PTP4A3-205ENST00000523147 MORC1Q86VD1 984 aa28.71■■■□□ 2.19
PTP4A3-205ENST00000523147 SHANK3Q9BYB0 1731 aa28.7■■■□□ 2.19
PTP4A3-205ENST00000523147 SPON1Q9HCB6 807 aa28.7■■■□□ 2.18
PTP4A3-205ENST00000523147 KIF7Q2M1P5 1343 aa28.69■■■□□ 2.18
PTP4A3-205ENST00000523147 PCDH11XQ9BZA7 1347 aa28.69■■■□□ 2.18
PTP4A3-205ENST00000523147 PCDH11YQ9BZA8 1340 aa28.69■■■□□ 2.18
PTP4A3-205ENST00000523147 SLC15A2Q16348 729 aa28.69■■■□□ 2.18
PTP4A3-205ENST00000523147 DOT1LQ8TEK3 1739 aa28.69■■■□□ 2.18
PTP4A3-205ENST00000523147 EYA1Q99502 592 aa28.67■■■□□ 2.18
PTP4A3-205ENST00000523147 PPP1R1BQ9UD71 204 aaPredicted RBP28.66■■■□□ 2.18
PTP4A3-205ENST00000523147 EIF4A2Q14240 407 aaKnown RBP28.64■■■□□ 2.18
PTP4A3-205ENST00000523147 SLC27A3Q5K4L6 730 aa28.64■■■□□ 2.18
PTP4A3-205ENST00000523147 SPG7Q9UQ90 795 aa28.64■■■□□ 2.18
PTP4A3-205ENST00000523147 PDGFDQ9GZP0 370 aaPredicted RBP28.61■■■□□ 2.17
PTP4A3-205ENST00000523147 LRRC4BQ9NT99 713 aa28.61■■■□□ 2.17
PTP4A3-205ENST00000523147 CYP27B1O15528 508 aa28.6■■■□□ 2.17
PTP4A3-205ENST00000523147 ZBTB7AO95365 584 aa28.6■■■□□ 2.17
PTP4A3-205ENST00000523147 NCAPD2Q15021 1401 aa28.6■■■□□ 2.17
PTP4A3-205ENST00000523147 CASZ1Q86V15 1759 aa28.58■■■□□ 2.17
PTP4A3-205ENST00000523147 MPRIPQ6WCQ1 1025 aa28.57■■■□□ 2.16
PTP4A3-205ENST00000523147 PKD1L3Q7Z443 1732 aa28.57■■■□□ 2.16
PTP4A3-205ENST00000523147 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.56■■■□□ 2.16
PTP4A3-205ENST00000523147 KCNQ4P56696 695 aa28.55■■■□□ 2.16
PTP4A3-205ENST00000523147 AMER1Q5JTC6 1135 aaPredicted RBP28.55■■■□□ 2.16
PTP4A3-205ENST00000523147 CCNL1Q9UK58 526 aaPredicted RBP28.55■■■□□ 2.16
PTP4A3-205ENST00000523147 ATF5Q9Y2D1 282 aaPredicted RBP28.55■■■□□ 2.16
PTP4A3-205ENST00000523147 PAPPAQ13219 1627 aa28.54■■■□□ 2.16
PTP4A3-205ENST00000523147 ZNF827Q17R98 1081 aa28.54■■■□□ 2.16
PTP4A3-205ENST00000523147 IGSF1Q8N6C5 1336 aa28.52■■■□□ 2.16
PTP4A3-205ENST00000523147 IFNL2Q8IZJ0 200 aa28.52■■■□□ 2.16
PTP4A3-205ENST00000523147 MTFR1LQ9H019 292 aa28.52■■■□□ 2.16
PTP4A3-205ENST00000523147 LY75O60449 1722 aa28.52■■■□□ 2.16
PTP4A3-205ENST00000523147 NKX1-1Q15270 411 aaPredicted RBP28.51■■■□□ 2.15
PTP4A3-205ENST00000523147 AKT1S1Q96B36 256 aa28.51■■■□□ 2.15
PTP4A3-205ENST00000523147 TFCP2L1Q9NZI6 479 aa28.51■■■□□ 2.15
PTP4A3-205ENST00000523147 CC2D1BQ5T0F9 858 aaKnown RBP28.5■■■□□ 2.15
PTP4A3-205ENST00000523147 PER1O15534 1290 aaPredicted RBP28.48■■■□□ 2.15
PTP4A3-205ENST00000523147 PHKG2P15735 406 aa28.48■■■□□ 2.15
PTP4A3-205ENST00000523147 HMGB2P26583 209 aaKnown RBP28.48■■■□□ 2.15
PTP4A3-205ENST00000523147 CNGB1Q14028 1251 aaPredicted RBP28.47■■■□□ 2.15
PTP4A3-205ENST00000523147 PLEKHO1Q53GL0 409 aaPredicted RBP28.47■■■□□ 2.15
PTP4A3-205ENST00000523147 SMARCC1Q92922 1105 aaPredicted RBP28.47■■■□□ 2.15
PTP4A3-205ENST00000523147 PALLDQ8WX93 1383 aa28.47■■■□□ 2.15
PTP4A3-205ENST00000523147 TMOD3Q9NYL9 352 aa28.46■■■□□ 2.15
PTP4A3-205ENST00000523147 PLEKHG2Q9H7P9 1386 aa28.46■■■□□ 2.15
PTP4A3-205ENST00000523147 TOGARAM1Q9Y4F4 1720 aa28.46■■■□□ 2.15
PTP4A3-205ENST00000523147 PTGER2P43116 358 aa28.45■■■□□ 2.14
PTP4A3-205ENST00000523147 PIGBQ92521 554 aa28.45■■■□□ 2.14
PTP4A3-205ENST00000523147 ITGB4P16144 1822 aa28.45■■■□□ 2.14
PTP4A3-205ENST00000523147 MTHFSP49914 203 aa28.44■■■□□ 2.14
PTP4A3-205ENST00000523147 DCAF8L1A6NGE4 600 aa28.43■■■□□ 2.14
PTP4A3-205ENST00000523147 AMOTQ4VCS5 1084 aa28.43■■■□□ 2.14
PTP4A3-205ENST00000523147 SULT6B1Q6IMI4 303 aa28.43■■■□□ 2.14
PTP4A3-205ENST00000523147 HSP90AB1P08238 724 aaKnown RBP28.42■■■□□ 2.14
PTP4A3-205ENST00000523147 SLC16A10Q8TF71 515 aa28.42■■■□□ 2.14
PTP4A3-205ENST00000523147 PNPLA7Q6ZV29 1317 aa28.42■■■□□ 2.14
PTP4A3-205ENST00000523147 MSH5O43196 834 aa28.41■■■□□ 2.14
PTP4A3-205ENST00000523147 IL13P35225 146 aa28.41■■■□□ 2.14
PTP4A3-205ENST00000523147 AEBP1Q8IUX7 1158 aa28.41■■■□□ 2.14
PTP4A3-205ENST00000523147 ZNF530Q6P9A1 599 aaPredicted RBP28.4■■■□□ 2.14
PTP4A3-205ENST00000523147 QSER1Q2KHR3 1735 aa28.39■■■□□ 2.14
PTP4A3-205ENST00000523147 C1orf141Q5JVX7 400 aa28.38■■■□□ 2.13
PTP4A3-205ENST00000523147 DCAF5Q96JK2 942 aa28.37■■■□□ 2.13
PTP4A3-205ENST00000523147 ARXQ96QS3 562 aa28.37■■■□□ 2.13
PTP4A3-205ENST00000523147 C5P01031 1676 aa28.37■■■□□ 2.13
PTP4A3-205ENST00000523147 POLD1P28340 1107 aa28.36■■■□□ 2.13
PTP4A3-205ENST00000523147 NPC1L1Q9UHC9 1359 aa28.36■■■□□ 2.13
PTP4A3-205ENST00000523147 ERVV-2B6SEH9 535 aa28.35■■■□□ 2.13
PTP4A3-205ENST00000523147 SGIP1Q9BQI5 828 aa28.35■■■□□ 2.13
PTP4A3-205ENST00000523147 DIAPH1O60610 1272 aaKnown RBP28.34■■■□□ 2.13
PTP4A3-205ENST00000523147 FHDC1Q9C0D6 1143 aaPredicted RBP28.34■■■□□ 2.13
PTP4A3-205ENST00000523147 ASAP1Q9ULH1 1129 aa28.34■■■□□ 2.13
PTP4A3-205ENST00000523147 KDRP35968 1356 aa28.34■■■□□ 2.13
PTP4A3-205ENST00000523147 TUBGCP6Q96RT7 1819 aa28.34■■■□□ 2.13
PTP4A3-205ENST00000523147 LOC102724428A0A0B4J2F2 783 aa28.33■■■□□ 2.13
PTP4A3-205ENST00000523147 SIK1P57059 783 aa28.33■■■□□ 2.13
PTP4A3-205ENST00000523147 AK7Q96M32 723 aa28.33■■■□□ 2.13
PTP4A3-205ENST00000523147 CABP4P57796 275 aa28.32■■■□□ 2.12
PTP4A3-205ENST00000523147 FLAD1Q8NFF5 587 aa28.32■■■□□ 2.12
PTP4A3-205ENST00000523147 HMOX1P09601 288 aa28.31■■■□□ 2.12
PTP4A3-205ENST00000523147 COL23A1Q86Y22 540 aaPredicted RBP28.31■■■□□ 2.12
PTP4A3-205ENST00000523147 ATG3Q9NT62 314 aa28.31■■■□□ 2.12
PTP4A3-205ENST00000523147 TAF1LQ8IZX4 1826 aa28.3■■■□□ 2.12
PTP4A3-205ENST00000523147 ATP6V1AP38606 617 aa28.3■■■□□ 2.12
PTP4A3-205ENST00000523147 SYT17Q9BSW7 474 aa28.3■■■□□ 2.12
PTP4A3-205ENST00000523147 KLHL34Q8N239 644 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms