RNA–Protein interactions for RNA: ENST00000522959.5

ARFGAP1-216, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 556 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-216ENST00000522959 PANK3Q9H999 370 aa21.53■■□□□ 1.04
ARFGAP1-216ENST00000522959 FLT4P35916 1363 aa21.52■■□□□ 1.04
ARFGAP1-216ENST00000522959 NBPF14Q5TI25 921 aa21.51■■□□□ 1.03
ARFGAP1-216ENST00000522959 PAPPAQ13219 1627 aa21.51■■□□□ 1.03
ARFGAP1-216ENST00000522959 ZCRB1Q8TBF4 217 aaKnown RBP21.5■■□□□ 1.03
ARFGAP1-216ENST00000522959 POLKQ9UBT6 870 aa21.5■■□□□ 1.03
ARFGAP1-216ENST00000522959 NSD2O96028 1365 aa21.49■■□□□ 1.03
ARFGAP1-216ENST00000522959 CGNL1Q0VF96 1302 aa21.49■■□□□ 1.03
ARFGAP1-216ENST00000522959 KIF24Q5T7B8 1368 aa21.48■■□□□ 1.03
ARFGAP1-216ENST00000522959 LRRC4BQ9NT99 713 aa21.48■■□□□ 1.03
ARFGAP1-216ENST00000522959 ITGB4P16144 1822 aa21.48■■□□□ 1.03
ARFGAP1-216ENST00000522959 NCAPD2Q15021 1401 aa21.47■■□□□ 1.03
ARFGAP1-216ENST00000522959 LY75O60449 1722 aa21.47■■□□□ 1.03
ARFGAP1-216ENST00000522959 TOGARAM1Q9Y4F4 1720 aa21.47■■□□□ 1.03
ARFGAP1-216ENST00000522959 PPM1GO15355 546 aaPredicted RBP21.47■■□□□ 1.03
ARFGAP1-216ENST00000522959 TNNT2P45379 298 aaPredicted RBP21.47■■□□□ 1.03
ARFGAP1-216ENST00000522959 PKD1L3Q7Z443 1732 aa21.46■■□□□ 1.03
ARFGAP1-216ENST00000522959 TUBGCP6Q96RT7 1819 aa21.46■■□□□ 1.03
ARFGAP1-216ENST00000522959 PRIM1P49642 420 aaKnown RBP21.46■■□□□ 1.03
ARFGAP1-216ENST00000522959 WASHC2AQ641Q2 1341 aa21.46■■□□□ 1.03
ARFGAP1-216ENST00000522959 KCNQ4P56696 695 aa21.44■■□□□ 1.02
ARFGAP1-216ENST00000522959 SMG6Q86US8 1419 aaKnown RBP21.44■■□□□ 1.02
ARFGAP1-216ENST00000522959 SLC15A2Q16348 729 aa21.43■■□□□ 1.02
ARFGAP1-216ENST00000522959 EYA1Q99502 592 aa21.43■■□□□ 1.02
ARFGAP1-216ENST00000522959 KIF7Q2M1P5 1343 aa21.43■■□□□ 1.02
ARFGAP1-216ENST00000522959 CYP27B1O15528 508 aa21.42■■□□□ 1.02
ARFGAP1-216ENST00000522959 TATP17735 454 aaPredicted RBP21.41■■□□□ 1.02
ARFGAP1-216ENST00000522959 ZNF827Q17R98 1081 aa21.41■■□□□ 1.02
ARFGAP1-216ENST00000522959 RAPGEF4Q8WZA2 1011 aa21.41■■□□□ 1.02
ARFGAP1-216ENST00000522959 EIF4A2Q14240 407 aaKnown RBP21.4■■□□□ 1.02
ARFGAP1-216ENST00000522959 SYTL4Q96C24 671 aaPredicted RBP21.4■■□□□ 1.02
ARFGAP1-216ENST00000522959 TAF1LQ8IZX4 1826 aa21.37■■□□□ 1.01
ARFGAP1-216ENST00000522959 ZBTB7AO95365 584 aa21.37■■□□□ 1.01
ARFGAP1-216ENST00000522959 SPON1Q9HCB6 807 aa21.37■■□□□ 1.01
ARFGAP1-216ENST00000522959 STK32BQ9NY57 414 aa21.37■■□□□ 1.01
ARFGAP1-216ENST00000522959 QSER1Q2KHR3 1735 aa21.37■■□□□ 1.01
ARFGAP1-216ENST00000522959 PTGER2P43116 358 aa21.36■■□□□ 1.01
ARFGAP1-216ENST00000522959 AMER1Q5JTC6 1135 aaPredicted RBP21.36■■□□□ 1.01
ARFGAP1-216ENST00000522959 PER1O15534 1290 aaPredicted RBP21.35■■□□□ 1.01
ARFGAP1-216ENST00000522959 AKT1S1Q96B36 256 aa21.35■■□□□ 1.01
ARFGAP1-216ENST00000522959 ATF5Q9Y2D1 282 aaPredicted RBP21.35■■□□□ 1.01
ARFGAP1-216ENST00000522959 PCDH11XQ9BZA7 1347 aa21.33■■□□□ 1.01
ARFGAP1-216ENST00000522959 PCDH11YQ9BZA8 1340 aa21.33■■□□□ 1.01
ARFGAP1-216ENST00000522959 UTRNP46939 3433 aa21.33■■□□□ 1
ARFGAP1-216ENST00000522959 MORC1Q86VD1 984 aa21.32■■□□□ 1
ARFGAP1-216ENST00000522959 SGIP1Q9BQI5 828 aa21.32■■□□□ 1
ARFGAP1-216ENST00000522959 COL24A1Q17RW2 1714 aa21.32■■□□□ 1
ARFGAP1-216ENST00000522959 C5P01031 1676 aa21.31■■□□□ 1
ARFGAP1-216ENST00000522959 IGSF1Q8N6C5 1336 aa21.3■■□□□ 1
ARFGAP1-216ENST00000522959 NKX1-1Q15270 411 aaPredicted RBP21.3■■□□□ 1
ARFGAP1-216ENST00000522959 KNSTRNQ9Y448 316 aa21.3■■□□□ 1
ARFGAP1-216ENST00000522959 SLC27A3Q5K4L6 730 aa21.29■■□□□ 1
ARFGAP1-216ENST00000522959 MPRIPQ6WCQ1 1025 aa21.29■■□□□ 1
ARFGAP1-216ENST00000522959 PNPLA7Q6ZV29 1317 aa21.29■■□□□ 1
ARFGAP1-216ENST00000522959 AEBP1Q8IUX7 1158 aa21.28■■□□□ 1
ARFGAP1-216ENST00000522959 PIGBQ92521 554 aa21.27■■□□□ 1
ARFGAP1-216ENST00000522959 PHKG2P15735 406 aa21.26■□□□□ 0.99
ARFGAP1-216ENST00000522959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.26■□□□□ 0.995e-35■□□□□ 9.7
ARFGAP1-216ENST00000522959 CCNL1Q9UK58 526 aaPredicted RBP21.26■□□□□ 0.99
ARFGAP1-216ENST00000522959 SPG7Q9UQ90 795 aa21.26■□□□□ 0.99
ARFGAP1-216ENST00000522959 VIRMAQ69YN4 1812 aaKnown RBP21.26■□□□□ 0.99
ARFGAP1-216ENST00000522959 MTFR1LQ9H019 292 aa21.25■□□□□ 0.99
ARFGAP1-216ENST00000522959 GOLGB1Q14789 3259 aaKnown RBP21.24■□□□□ 0.99
ARFGAP1-216ENST00000522959 IL13P35225 146 aa21.24■□□□□ 0.99
ARFGAP1-216ENST00000522959 PPP1R1BQ9UD71 204 aaPredicted RBP21.24■□□□□ 0.99
ARFGAP1-216ENST00000522959 PALLDQ8WX93 1383 aa21.23■□□□□ 0.99
ARFGAP1-216ENST00000522959 CC2D1BQ5T0F9 858 aaKnown RBP21.23■□□□□ 0.99
ARFGAP1-216ENST00000522959 AMIGO3Q86WK7 504 aa21.23■□□□□ 0.99
ARFGAP1-216ENST00000522959 UBR3Q6ZT12 1888 aa21.23■□□□□ 0.99
ARFGAP1-216ENST00000522959 SMIM5Q71RC9 77 aa21.22■□□□□ 0.99
ARFGAP1-216ENST00000522959 C4BP0C0L5 1744 aa21.21■□□□□ 0.99
ARFGAP1-216ENST00000522959 MTHFSP49914 203 aa21.21■□□□□ 0.99
ARFGAP1-216ENST00000522959 IFNL2Q8IZJ0 200 aa21.21■□□□□ 0.99
ARFGAP1-216ENST00000522959 TFCP2L1Q9NZI6 479 aa21.21■□□□□ 0.99
ARFGAP1-216ENST00000522959 ASAP1Q9ULH1 1129 aa21.21■□□□□ 0.99
ARFGAP1-216ENST00000522959 COL23A1Q86Y22 540 aaPredicted RBP21.2■□□□□ 0.98
ARFGAP1-216ENST00000522959 KDM6AO15550 1401 aaPredicted RBP21.2■□□□□ 0.98
ARFGAP1-216ENST00000522959 FHDC1Q9C0D6 1143 aaPredicted RBP21.19■□□□□ 0.98
ARFGAP1-216ENST00000522959 SCN11AQ9UI33 1791 aa21.18■□□□□ 0.98
ARFGAP1-216ENST00000522959 CNGB1Q14028 1251 aaPredicted RBP21.18■□□□□ 0.98
ARFGAP1-216ENST00000522959 SULT6B1Q6IMI4 303 aa21.18■□□□□ 0.98
ARFGAP1-216ENST00000522959 KDRP35968 1356 aa21.18■□□□□ 0.98
ARFGAP1-216ENST00000522959 SYT17Q9BSW7 474 aa21.17■□□□□ 0.98
ARFGAP1-216ENST00000522959 SLC4A9Q96Q91 983 aa21.16■□□□□ 0.98
ARFGAP1-216ENST00000522959 ATG3Q9NT62 314 aa21.16■□□□□ 0.98
ARFGAP1-216ENST00000522959 COL3A1P02461 1466 aaPredicted RBP21.15■□□□□ 0.98
ARFGAP1-216ENST00000522959 ITPK1Q13572 414 aa21.15■□□□□ 0.98
ARFGAP1-216ENST00000522959 LINC00116Q8NCU8 138 aa21.15■□□□□ 0.98
ARFGAP1-216ENST00000522959 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
ARFGAP1-216ENST00000522959 MYH14Q7Z406 1995 aaKnown RBP21.15■□□□□ 0.98
ARFGAP1-216ENST00000522959 PLEKHG2Q9H7P9 1386 aa21.14■□□□□ 0.98
ARFGAP1-216ENST00000522959 PLEKHO1Q53GL0 409 aaPredicted RBP21.14■□□□□ 0.97
ARFGAP1-216ENST00000522959 ZNF530Q6P9A1 599 aaPredicted RBP21.14■□□□□ 0.97
ARFGAP1-216ENST00000522959 SLC16A10Q8TF71 515 aa21.14■□□□□ 0.97
ARFGAP1-216ENST00000522959 ARXQ96QS3 562 aa21.14■□□□□ 0.97
ARFGAP1-216ENST00000522959 NPC1L1Q9UHC9 1359 aa21.13■□□□□ 0.97
ARFGAP1-216ENST00000522959 LOC102724428A0A0B4J2F2 783 aa21.13■□□□□ 0.97
ARFGAP1-216ENST00000522959 SIK1P57059 783 aa21.13■□□□□ 0.97
ARFGAP1-216ENST00000522959 SMARCC1Q92922 1105 aaPredicted RBP21.13■□□□□ 0.97
ARFGAP1-216ENST00000522959 COL5A3P25940 1745 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms