RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 RGPD4Q7Z3J3 1758 aa25.74■■□□□ 1.71
SPIDR-220ENST00000522900 RAPGEF4Q8WZA2 1011 aa25.74■■□□□ 1.71
SPIDR-220ENST00000522900 NHSQ6T4R5 1651 aa25.74■■□□□ 1.71
SPIDR-220ENST00000522900 WASHC2AQ641Q2 1341 aa25.73■■□□□ 1.71
SPIDR-220ENST00000522900 TATP17735 454 aaPredicted RBP25.72■■□□□ 1.71
SPIDR-220ENST00000522900 PRIM1P49642 420 aaKnown RBP25.72■■□□□ 1.71
SPIDR-220ENST00000522900 KIF7Q2M1P5 1343 aa25.7■■□□□ 1.71
SPIDR-220ENST00000522900 PDGFDQ9GZP0 370 aaPredicted RBP25.7■■□□□ 1.7
SPIDR-220ENST00000522900 SYTL4Q96C24 671 aaPredicted RBP25.69■■□□□ 1.7
SPIDR-220ENST00000522900 EYA1Q99502 592 aa25.68■■□□□ 1.7
SPIDR-220ENST00000522900 LRRC4BQ9NT99 713 aa25.67■■□□□ 1.7
SPIDR-220ENST00000522900 SHANK3Q9BYB0 1731 aa25.66■■□□□ 1.7
SPIDR-220ENST00000522900 STK32BQ9NY57 414 aa25.66■■□□□ 1.7
SPIDR-220ENST00000522900 SLC15A2Q16348 729 aa25.65■■□□□ 1.7
SPIDR-220ENST00000522900 BTAF1O14981 1849 aa25.65■■□□□ 1.7
SPIDR-220ENST00000522900 EIF4A2Q14240 407 aaKnown RBP25.64■■□□□ 1.7
SPIDR-220ENST00000522900 MORC1Q86VD1 984 aa25.64■■□□□ 1.7
SPIDR-220ENST00000522900 KNSTRNQ9Y448 316 aa25.64■■□□□ 1.7
SPIDR-220ENST00000522900 MAP2P11137 1827 aaKnown RBP25.64■■□□□ 1.7
SPIDR-220ENST00000522900 NSD2O96028 1365 aa25.64■■□□□ 1.69
SPIDR-220ENST00000522900 ANKRD26Q9UPS8 1709 aa25.63■■□□□ 1.69
SPIDR-220ENST00000522900 CYP27B1O15528 508 aa25.63■■□□□ 1.69
SPIDR-220ENST00000522900 NCAPD2Q15021 1401 aa25.63■■□□□ 1.69
SPIDR-220ENST00000522900 KCNQ4P56696 695 aa25.62■■□□□ 1.69
SPIDR-220ENST00000522900 SPON1Q9HCB6 807 aa25.62■■□□□ 1.69
SPIDR-220ENST00000522900 PCDH11XQ9BZA7 1347 aa25.61■■□□□ 1.69
SPIDR-220ENST00000522900 PCDH11YQ9BZA8 1340 aa25.61■■□□□ 1.69
SPIDR-220ENST00000522900 AMER1Q5JTC6 1135 aaPredicted RBP25.6■■□□□ 1.69
SPIDR-220ENST00000522900 KAT6BQ8WYB5 2073 aa25.6■■□□□ 1.69
SPIDR-220ENST00000522900 ZBTB7AO95365 584 aa25.59■■□□□ 1.69
SPIDR-220ENST00000522900 ZNF827Q17R98 1081 aa25.59■■□□□ 1.69
SPIDR-220ENST00000522900 DOT1LQ8TEK3 1739 aa25.59■■□□□ 1.69
SPIDR-220ENST00000522900 PER1O15534 1290 aaPredicted RBP25.56■■□□□ 1.68
SPIDR-220ENST00000522900 SLC27A3Q5K4L6 730 aa25.56■■□□□ 1.68
SPIDR-220ENST00000522900 SPG7Q9UQ90 795 aa25.56■■□□□ 1.68
SPIDR-220ENST00000522900 ATF5Q9Y2D1 282 aaPredicted RBP25.56■■□□□ 1.68
SPIDR-220ENST00000522900 CASZ1Q86V15 1759 aa25.56■■□□□ 1.68
SPIDR-220ENST00000522900 PAPPAQ13219 1627 aa25.55■■□□□ 1.68
SPIDR-220ENST00000522900 AKT1S1Q96B36 256 aa25.54■■□□□ 1.68
SPIDR-220ENST00000522900 NKX1-1Q15270 411 aaPredicted RBP25.53■■□□□ 1.68
SPIDR-220ENST00000522900 MPRIPQ6WCQ1 1025 aa25.53■■□□□ 1.68
SPIDR-220ENST00000522900 PPP1R1BQ9UD71 204 aaPredicted RBP25.53■■□□□ 1.68
SPIDR-220ENST00000522900 IGSF1Q8N6C5 1336 aa25.53■■□□□ 1.68
SPIDR-220ENST00000522900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.52■■□□□ 1.683e-8■■■■□ 21.8
SPIDR-220ENST00000522900 PTGER2P43116 358 aa25.51■■□□□ 1.67
SPIDR-220ENST00000522900 PKD1L3Q7Z443 1732 aa25.5■■□□□ 1.67
SPIDR-220ENST00000522900 CCNL1Q9UK58 526 aaPredicted RBP25.5■■□□□ 1.67
SPIDR-220ENST00000522900 PHKG2P15735 406 aa25.48■■□□□ 1.67
SPIDR-220ENST00000522900 CC2D1BQ5T0F9 858 aaKnown RBP25.48■■□□□ 1.67
SPIDR-220ENST00000522900 PIGBQ92521 554 aa25.48■■□□□ 1.67
SPIDR-220ENST00000522900 AEBP1Q8IUX7 1158 aa25.47■■□□□ 1.67
SPIDR-220ENST00000522900 IFNL2Q8IZJ0 200 aa25.47■■□□□ 1.67
SPIDR-220ENST00000522900 MTFR1LQ9H019 292 aa25.47■■□□□ 1.67
SPIDR-220ENST00000522900 IL13P35225 146 aa25.46■■□□□ 1.67
SPIDR-220ENST00000522900 MTHFSP49914 203 aa25.45■■□□□ 1.66
SPIDR-220ENST00000522900 CNGB1Q14028 1251 aaPredicted RBP25.45■■□□□ 1.66
SPIDR-220ENST00000522900 SGIP1Q9BQI5 828 aa25.45■■□□□ 1.66
SPIDR-220ENST00000522900 TFCP2L1Q9NZI6 479 aa25.45■■□□□ 1.66
SPIDR-220ENST00000522900 LY75O60449 1722 aa25.45■■□□□ 1.66
SPIDR-220ENST00000522900 TOGARAM1Q9Y4F4 1720 aa25.45■■□□□ 1.66
SPIDR-220ENST00000522900 PNPLA7Q6ZV29 1317 aa25.44■■□□□ 1.66
SPIDR-220ENST00000522900 PALLDQ8WX93 1383 aa25.44■■□□□ 1.66
SPIDR-220ENST00000522900 PLEKHO1Q53GL0 409 aaPredicted RBP25.42■■□□□ 1.66
SPIDR-220ENST00000522900 SULT6B1Q6IMI4 303 aa25.42■■□□□ 1.66
SPIDR-220ENST00000522900 SMARCC1Q92922 1105 aaPredicted RBP25.4■■□□□ 1.66
SPIDR-220ENST00000522900 TMOD3Q9NYL9 352 aa25.4■■□□□ 1.66
SPIDR-220ENST00000522900 ASAP1Q9ULH1 1129 aa25.39■■□□□ 1.66
SPIDR-220ENST00000522900 ZNF530Q6P9A1 599 aaPredicted RBP25.38■■□□□ 1.65
SPIDR-220ENST00000522900 PLEKHG2Q9H7P9 1386 aa25.38■■□□□ 1.65
SPIDR-220ENST00000522900 ITGB4P16144 1822 aa25.37■■□□□ 1.65
SPIDR-220ENST00000522900 SLC16A10Q8TF71 515 aa25.37■■□□□ 1.65
SPIDR-220ENST00000522900 AMOTQ4VCS5 1084 aa25.36■■□□□ 1.65
SPIDR-220ENST00000522900 COL23A1Q86Y22 540 aaPredicted RBP25.36■■□□□ 1.65
SPIDR-220ENST00000522900 FHDC1Q9C0D6 1143 aaPredicted RBP25.36■■□□□ 1.65
SPIDR-220ENST00000522900 ATG3Q9NT62 314 aa25.36■■□□□ 1.65
SPIDR-220ENST00000522900 NPC1L1Q9UHC9 1359 aa25.35■■□□□ 1.65
SPIDR-220ENST00000522900 ARXQ96QS3 562 aa25.35■■□□□ 1.65
SPIDR-220ENST00000522900 KDRP35968 1356 aa25.34■■□□□ 1.65
SPIDR-220ENST00000522900 DCAF5Q96JK2 942 aa25.34■■□□□ 1.65
SPIDR-220ENST00000522900 LOC102724428A0A0B4J2F2 783 aa25.33■■□□□ 1.65
SPIDR-220ENST00000522900 ERVV-2B6SEH9 535 aa25.33■■□□□ 1.65
SPIDR-220ENST00000522900 MSH5O43196 834 aa25.33■■□□□ 1.65
SPIDR-220ENST00000522900 HSP90AB1P08238 724 aaKnown RBP25.33■■□□□ 1.65
SPIDR-220ENST00000522900 HMOX1P09601 288 aa25.33■■□□□ 1.65
SPIDR-220ENST00000522900 SIK1P57059 783 aa25.33■■□□□ 1.65
SPIDR-220ENST00000522900 SYT17Q9BSW7 474 aa25.33■■□□□ 1.65
SPIDR-220ENST00000522900 SMIM5Q71RC9 77 aa25.32■■□□□ 1.64
SPIDR-220ENST00000522900 AMIGO3Q86WK7 504 aa25.32■■□□□ 1.64
SPIDR-220ENST00000522900 TUBGCP6Q96RT7 1819 aa25.32■■□□□ 1.64
SPIDR-220ENST00000522900 KDM6AO15550 1401 aaPredicted RBP25.31■■□□□ 1.64
SPIDR-220ENST00000522900 DIAPH1O60610 1272 aaKnown RBP25.31■■□□□ 1.64
SPIDR-220ENST00000522900 QSER1Q2KHR3 1735 aa25.31■■□□□ 1.64
SPIDR-220ENST00000522900 ITPK1Q13572 414 aa25.3■■□□□ 1.64
SPIDR-220ENST00000522900 C1orf141Q5JVX7 400 aa25.3■■□□□ 1.64
SPIDR-220ENST00000522900 LINC00116Q8NCU8 138 aa25.3■■□□□ 1.64
SPIDR-220ENST00000522900 CABP4P57796 275 aa25.28■■□□□ 1.64
SPIDR-220ENST00000522900 C5P01031 1676 aa25.28■■□□□ 1.64
SPIDR-220ENST00000522900 ATP6V1AP38606 617 aa25.27■■□□□ 1.64
SPIDR-220ENST00000522900 AK7Q96M32 723 aa25.27■■□□□ 1.64
SPIDR-220ENST00000522900 SLC4A9Q96Q91 983 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms