RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ZNF772Q68DY9 489 aaPredicted RBP10.17□□□□□ -0.78
VPS13B-211ENST00000522802 FAM117AQ9C073 453 aa10.17□□□□□ -0.78
VPS13B-211ENST00000522802 GCC2Q8IWJ2 1684 aa10.16□□□□□ -0.78
VPS13B-211ENST00000522802 TSPY4P0CV99 314 aa10.16□□□□□ -0.78
VPS13B-211ENST00000522802 TSPY10P0CW01 314 aa10.16□□□□□ -0.78
VPS13B-211ENST00000522802 SLC4A3P48751 1232 aa10.16□□□□□ -0.78
VPS13B-211ENST00000522802 BCAMP50895 628 aa10.16□□□□□ -0.78
VPS13B-211ENST00000522802 IRX2Q9BZI1 471 aaPredicted RBP10.16□□□□□ -0.78
VPS13B-211ENST00000522802 ERBINQ96RT1 1412 aa10.16□□□□□ -0.78
VPS13B-211ENST00000522802 SETBP1Q9Y6X0 1596 aa10.15□□□□□ -0.78
VPS13B-211ENST00000522802 KIF15Q9NS87 1388 aa10.14□□□□□ -0.79
VPS13B-211ENST00000522802 LMTK2Q8IWU2 1503 aa10.14□□□□□ -0.79
VPS13B-211ENST00000522802 RXRBP28702 533 aa10.14□□□□□ -0.79
VPS13B-211ENST00000522802 BEGAINQ9BUH8 593 aa10.14□□□□□ -0.79
VPS13B-211ENST00000522802 ZFYVE9O95405 1425 aa10.14□□□□□ -0.79
VPS13B-211ENST00000522802 NHSL1Q5SYE7 1610 aa10.14□□□□□ -0.79
VPS13B-211ENST00000522802 PLEKHG3A1L390 1219 aa10.13□□□□□ -0.79
VPS13B-211ENST00000522802 GCGRP47871 477 aa10.13□□□□□ -0.79
VPS13B-211ENST00000522802 IDI1Q13907 227 aa10.13□□□□□ -0.79
VPS13B-211ENST00000522802 RDH13Q8NBN7 331 aa10.13□□□□□ -0.79
VPS13B-211ENST00000522802 DDRGK1Q96HY6 314 aa10.13□□□□□ -0.79
VPS13B-211ENST00000522802 TSR3Q9UJK0 312 aaKnown RBP10.13□□□□□ -0.79
VPS13B-211ENST00000522802 NOS1P29475 1434 aa10.13□□□□□ -0.79
VPS13B-211ENST00000522802 ASXL1Q8IXJ9 1541 aa10.12□□□□□ -0.79
VPS13B-211ENST00000522802 AFF2P51816 1311 aa10.12□□□□□ -0.79
VPS13B-211ENST00000522802 PPP4CP60510 307 aa10.12□□□□□ -0.79
VPS13B-211ENST00000522802 IL27Q8NEV9 243 aa10.12□□□□□ -0.79
VPS13B-211ENST00000522802 NECTIN2Q92692 538 aa10.12□□□□□ -0.79
VPS13B-211ENST00000522802 HPS5Q9UPZ3 1129 aa10.12□□□□□ -0.79
VPS13B-211ENST00000522802 NUTM2BA6NNL0 878 aaPredicted RBP10.11□□□□□ -0.79
VPS13B-211ENST00000522802 NUTM2EB1AL46 878 aaPredicted RBP10.11□□□□□ -0.79
VPS13B-211ENST00000522802 RNF40O75150 1001 aa10.11□□□□□ -0.79
VPS13B-211ENST00000522802 NUTM2AQ8IVF1 878 aaPredicted RBP10.11□□□□□ -0.79
VPS13B-211ENST00000522802 PLEKHG1Q9ULL1 1385 aa10.11□□□□□ -0.79
VPS13B-211ENST00000522802 TMEM131LA2VDJ0 1609 aa10.11□□□□□ -0.79
VPS13B-211ENST00000522802 MYOM3Q5VTT5 1437 aa10.1□□□□□ -0.79
VPS13B-211ENST00000522802 WBP1LQ9NX94 342 aa10.1□□□□□ -0.79
VPS13B-211ENST00000522802 ABCC5O15440 1437 aa10.08□□□□□ -0.8
VPS13B-211ENST00000522802 ADAMTS13Q76LX8 1427 aa10.08□□□□□ -0.8
VPS13B-211ENST00000522802 RIMS2Q9UQ26 1411 aa10.08□□□□□ -0.8
VPS13B-211ENST00000522802 NCOA3Q9Y6Q9 1424 aa10.08□□□□□ -0.8
VPS13B-211ENST00000522802 CFHP08603 1231 aa10.08□□□□□ -0.8
VPS13B-211ENST00000522802 BRINP3Q76B58 766 aa10.08□□□□□ -0.8
VPS13B-211ENST00000522802 SETD5Q9C0A6 1442 aa10.07□□□□□ -0.8
VPS13B-211ENST00000522802 XRN1Q8IZH2 1706 aaKnown RBP10.07□□□□□ -0.8
VPS13B-211ENST00000522802 KANK1Q14678 1352 aa10.07□□□□□ -0.8
VPS13B-211ENST00000522802 C14orf37Q86TY3 774 aa10.07□□□□□ -0.8
VPS13B-211ENST00000522802 SPIRE2Q8WWL2 714 aa10.07□□□□□ -0.8
VPS13B-211ENST00000522802 RRP7BPQ9NSQ0 103 aa10.07□□□□□ -0.8
VPS13B-211ENST00000522802 PTPN23Q9H3S7 1636 aa10.07□□□□□ -0.8
VPS13B-211ENST00000522802 ACTN4O43707 911 aaKnown RBP10.06□□□□□ -0.8
VPS13B-211ENST00000522802 KDM4AO75164 1064 aa10.06□□□□□ -0.8
VPS13B-211ENST00000522802 NUTM2DQ5VT03 806 aaPredicted RBP10.06□□□□□ -0.8
VPS13B-211ENST00000522802 NYAP1Q6ZVC0 841 aa10.06□□□□□ -0.8
VPS13B-211ENST00000522802 C8orf37Q96NL8 207 aa10.06□□□□□ -0.8
VPS13B-211ENST00000522802 TRPM2O94759 1503 aa10.06□□□□□ -0.8
VPS13B-211ENST00000522802 MST1RQ04912 1400 aa10.06□□□□□ -0.8
VPS13B-211ENST00000522802 UNC13BO14795 1591 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 NALCNQ8IZF0 1738 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 ATAD2Q6PL18 1390 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 PNPLA6Q8IY17 1366 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 NRXN3Q9Y4C0 1643 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 APLP1P51693 650 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 DIXDC1Q155Q3 683 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 TMEM132AQ24JP5 1023 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 KMT5BQ4FZB7 885 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 NUTM1Q86Y26 1132 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 PRR14Q9BWN1 585 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 TBC1D2Q9BYX2 928 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 DCCP43146 1447 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 DAPK1P53355 1430 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 PTPRUQ92729 1446 aa10.05□□□□□ -0.8
VPS13B-211ENST00000522802 PPP1R15AO75807 674 aaPredicted RBP10.04□□□□□ -0.8
VPS13B-211ENST00000522802 ITGBL1O95965 494 aaPredicted RBP10.04□□□□□ -0.8
VPS13B-211ENST00000522802 ATF3P18847 181 aa10.04□□□□□ -0.8
VPS13B-211ENST00000522802 USP46P62068 366 aa10.04□□□□□ -0.8
VPS13B-211ENST00000522802 RBM6P78332 1123 aaKnown RBP10.04□□□□□ -0.8
VPS13B-211ENST00000522802 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
VPS13B-211ENST00000522802 RPRD2Q5VT52 1461 aaKnown RBP10.04□□□□□ -0.8
VPS13B-211ENST00000522802 C19orf44Q9H6X5 657 aa10.03□□□□□ -0.8
VPS13B-211ENST00000522802 QTRT2Q9H974 415 aaKnown RBP10.03□□□□□ -0.8
VPS13B-211ENST00000522802 GOPCQ9HD26 462 aa10.03□□□□□ -0.8
VPS13B-211ENST00000522802 LRP5O75197 1615 aa10.03□□□□□ -0.8
VPS13B-211ENST00000522802 FUT2Q10981 343 aa10.02□□□□□ -0.81
VPS13B-211ENST00000522802 KANK4Q5T7N3 995 aaPredicted RBP10.02□□□□□ -0.81
VPS13B-211ENST00000522802 MYSM1Q5VVJ2 828 aa10.02□□□□□ -0.81
VPS13B-211ENST00000522802 DDX17Q92841 729 aaKnown RBP10.02□□□□□ -0.81
VPS13B-211ENST00000522802 LAMC1P11047 1609 aa10.02□□□□□ -0.81
VPS13B-211ENST00000522802 VPS8Q8N3P4 1428 aa10.01□□□□□ -0.81
VPS13B-211ENST00000522802 ATP6V1AP38606 617 aa10.01□□□□□ -0.81
VPS13B-211ENST00000522802 SH3D19Q5HYK7 790 aa10.01□□□□□ -0.81
VPS13B-211ENST00000522802 TBX22Q9Y458 520 aa10.01□□□□□ -0.81
VPS13B-211ENST00000522802 E9PCH4 1651 aa10.01□□□□□ -0.81
VPS13B-211ENST00000522802 HOXA2O43364 376 aa10□□□□□ -0.81
VPS13B-211ENST00000522802 SKIV2LQ15477 1246 aaKnown RBP10□□□□□ -0.81
VPS13B-211ENST00000522802 SLC52A1Q9NWF4 448 aa10□□□□□ -0.81
VPS13B-211ENST00000522802 PIK3R4Q99570 1358 aa10□□□□□ -0.81
VPS13B-211ENST00000522802 MOXD2PA6NHM9 499 aa9.99□□□□□ -0.81
VPS13B-211ENST00000522802 ADAMTS2O95450 1211 aa9.99□□□□□ -0.81
VPS13B-211ENST00000522802 GJA5P36382 358 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms