RNA–Protein interactions for RNA: ENST00000522788.5

HOXA3-206, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-206ENST00000522788 TXNRD1Q16881 649 aa29.63■■■□□ 2.33
HOXA3-206ENST00000522788 ANO8Q9HCE9 1232 aaPredicted RBP29.63■■■□□ 2.33
HOXA3-206ENST00000522788 TNNT2P45379 298 aaPredicted RBP29.62■■■□□ 2.33
HOXA3-206ENST00000522788 RAPGEF4Q8WZA2 1011 aa29.62■■■□□ 2.33
HOXA3-206ENST00000522788 NSD2O96028 1365 aa29.62■■■□□ 2.33
HOXA3-206ENST00000522788 ANKRD26Q9UPS8 1709 aa29.62■■■□□ 2.33
HOXA3-206ENST00000522788 LRP5O75197 1615 aa29.61■■■□□ 2.33
HOXA3-206ENST00000522788 NCAPD2Q15021 1401 aa29.61■■■□□ 2.33
HOXA3-206ENST00000522788 TATP17735 454 aaPredicted RBP29.6■■■□□ 2.33
HOXA3-206ENST00000522788 EYA1Q99502 592 aa29.58■■■□□ 2.33
HOXA3-206ENST00000522788 SHANK3Q9BYB0 1731 aa29.57■■■□□ 2.32
HOXA3-206ENST00000522788 KNSTRNQ9Y448 316 aa29.56■■■□□ 2.32
HOXA3-206ENST00000522788 PRIM1P49642 420 aaKnown RBP29.55■■■□□ 2.32
HOXA3-206ENST00000522788 AMER1Q5JTC6 1135 aaPredicted RBP29.55■■■□□ 2.32
HOXA3-206ENST00000522788 EIF4A2Q14240 407 aaKnown RBP29.54■■■□□ 2.32
HOXA3-206ENST00000522788 MAP2P11137 1827 aaKnown RBP29.54■■■□□ 2.32
HOXA3-206ENST00000522788 MORC1Q86VD1 984 aa29.53■■■□□ 2.32
HOXA3-206ENST00000522788 BTAF1O14981 1849 aa29.51■■■□□ 2.31
HOXA3-206ENST00000522788 PER1O15534 1290 aaPredicted RBP29.51■■■□□ 2.31
HOXA3-206ENST00000522788 PCDH11XQ9BZA7 1347 aa29.5■■■□□ 2.31
HOXA3-206ENST00000522788 PCDH11YQ9BZA8 1340 aa29.5■■■□□ 2.31
HOXA3-206ENST00000522788 CYP27B1O15528 508 aa29.5■■■□□ 2.31
HOXA3-206ENST00000522788 SYTL4Q96C24 671 aaPredicted RBP29.5■■■□□ 2.31
HOXA3-206ENST00000522788 LRRC4BQ9NT99 713 aa29.49■■■□□ 2.31
HOXA3-206ENST00000522788 SLC15A2Q16348 729 aa29.48■■■□□ 2.31
HOXA3-206ENST00000522788 PDGFDQ9GZP0 370 aaPredicted RBP29.48■■■□□ 2.31
HOXA3-206ENST00000522788 STK32BQ9NY57 414 aa29.47■■■□□ 2.31
HOXA3-206ENST00000522788 DOT1LQ8TEK3 1739 aa29.45■■■□□ 2.31
HOXA3-206ENST00000522788 IGSF1Q8N6C5 1336 aa29.45■■■□□ 2.3
HOXA3-206ENST00000522788 PAPPAQ13219 1627 aa29.43■■■□□ 2.3
HOXA3-206ENST00000522788 SLC27A3Q5K4L6 730 aa29.43■■■□□ 2.3
HOXA3-206ENST00000522788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.43■■■□□ 2.3
HOXA3-206ENST00000522788 NKX1-1Q15270 411 aaPredicted RBP29.42■■■□□ 2.3
HOXA3-206ENST00000522788 SPG7Q9UQ90 795 aa29.42■■■□□ 2.3
HOXA3-206ENST00000522788 PKD1L3Q7Z443 1732 aa29.42■■■□□ 2.3
HOXA3-206ENST00000522788 SPON1Q9HCB6 807 aa29.41■■■□□ 2.3
HOXA3-206ENST00000522788 ZNF827Q17R98 1081 aa29.4■■■□□ 2.3
HOXA3-206ENST00000522788 CASZ1Q86V15 1759 aa29.39■■■□□ 2.3
HOXA3-206ENST00000522788 KAT6BQ8WYB5 2073 aa29.39■■■□□ 2.3
HOXA3-206ENST00000522788 KCNQ4P56696 695 aa29.38■■■□□ 2.29
HOXA3-206ENST00000522788 AKT1S1Q96B36 256 aa29.38■■■□□ 2.29
HOXA3-206ENST00000522788 CC2D1BQ5T0F9 858 aaKnown RBP29.36■■■□□ 2.29
HOXA3-206ENST00000522788 PLEKHG2Q9H7P9 1386 aa29.36■■■□□ 2.29
HOXA3-206ENST00000522788 ZBTB7AO95365 584 aa29.35■■■□□ 2.29
HOXA3-206ENST00000522788 PHKG2P15735 406 aa29.35■■■□□ 2.29
HOXA3-206ENST00000522788 IL13P35225 146 aa29.35■■■□□ 2.29
HOXA3-206ENST00000522788 MPRIPQ6WCQ1 1025 aa29.34■■■□□ 2.29
HOXA3-206ENST00000522788 IFNL2Q8IZJ0 200 aa29.34■■■□□ 2.29
HOXA3-206ENST00000522788 NPC1L1Q9UHC9 1359 aa29.34■■■□□ 2.29
HOXA3-206ENST00000522788 MTHFSP49914 203 aa29.33■■■□□ 2.29
HOXA3-206ENST00000522788 AEBP1Q8IUX7 1158 aa29.33■■■□□ 2.29
HOXA3-206ENST00000522788 TOGARAM1Q9Y4F4 1720 aa29.32■■■□□ 2.28
HOXA3-206ENST00000522788 CCNL1Q9UK58 526 aaPredicted RBP29.32■■■□□ 2.28
HOXA3-206ENST00000522788 LY75O60449 1722 aa29.31■■■□□ 2.28
HOXA3-206ENST00000522788 PIGBQ92521 554 aa29.31■■■□□ 2.28
HOXA3-206ENST00000522788 PTGER2P43116 358 aa29.3■■■□□ 2.28
HOXA3-206ENST00000522788 ATF5Q9Y2D1 282 aaPredicted RBP29.3■■■□□ 2.28
HOXA3-206ENST00000522788 PALLDQ8WX93 1383 aa29.28■■■□□ 2.28
HOXA3-206ENST00000522788 SULT6B1Q6IMI4 303 aa29.28■■■□□ 2.28
HOXA3-206ENST00000522788 KDRP35968 1356 aa29.27■■■□□ 2.28
HOXA3-206ENST00000522788 PLEKHO1Q53GL0 409 aaPredicted RBP29.27■■■□□ 2.28
HOXA3-206ENST00000522788 MTFR1LQ9H019 292 aa29.27■■■□□ 2.28
HOXA3-206ENST00000522788 SGIP1Q9BQI5 828 aa29.26■■■□□ 2.27
HOXA3-206ENST00000522788 PPP1R1BQ9UD71 204 aaPredicted RBP29.26■■■□□ 2.27
HOXA3-206ENST00000522788 PNPLA7Q6ZV29 1317 aa29.25■■■□□ 2.27
HOXA3-206ENST00000522788 AMOTQ4VCS5 1084 aa29.24■■■□□ 2.27
HOXA3-206ENST00000522788 SMARCC1Q92922 1105 aaPredicted RBP29.24■■■□□ 2.27
HOXA3-206ENST00000522788 CNGB1Q14028 1251 aaPredicted RBP29.23■■■□□ 2.27
HOXA3-206ENST00000522788 TMOD3Q9NYL9 352 aa29.22■■■□□ 2.27
HOXA3-206ENST00000522788 TFCP2L1Q9NZI6 479 aa29.22■■■□□ 2.27
HOXA3-206ENST00000522788 ZNF530Q6P9A1 599 aaPredicted RBP29.21■■■□□ 2.27
HOXA3-206ENST00000522788 ITGB4P16144 1822 aa29.2■■■□□ 2.27
HOXA3-206ENST00000522788 HSP90AB1P08238 724 aaKnown RBP29.19■■■□□ 2.26
HOXA3-206ENST00000522788 DCAF5Q96JK2 942 aa29.19■■■□□ 2.26
HOXA3-206ENST00000522788 ASAP1Q9ULH1 1129 aa29.19■■■□□ 2.26
HOXA3-206ENST00000522788 ERVV-2B6SEH9 535 aa29.18■■■□□ 2.26
HOXA3-206ENST00000522788 DIAPH1O60610 1272 aaKnown RBP29.18■■■□□ 2.26
HOXA3-206ENST00000522788 SLC16A10Q8TF71 515 aa29.18■■■□□ 2.26
HOXA3-206ENST00000522788 KDM6AO15550 1401 aaPredicted RBP29.18■■■□□ 2.26
HOXA3-206ENST00000522788 ATG3Q9NT62 314 aa29.17■■■□□ 2.26
HOXA3-206ENST00000522788 COL3A1P02461 1466 aaPredicted RBP29.16■■■□□ 2.26
HOXA3-206ENST00000522788 QSER1Q2KHR3 1735 aa29.15■■■□□ 2.26
HOXA3-206ENST00000522788 LOC102724428A0A0B4J2F2 783 aa29.15■■■□□ 2.26
HOXA3-206ENST00000522788 HMOX1P09601 288 aa29.15■■■□□ 2.26
HOXA3-206ENST00000522788 SIK1P57059 783 aa29.15■■■□□ 2.26
HOXA3-206ENST00000522788 COL23A1Q86Y22 540 aaPredicted RBP29.15■■■□□ 2.26
HOXA3-206ENST00000522788 HMGB2P26583 209 aaKnown RBP29.12■■■□□ 2.25
HOXA3-206ENST00000522788 C1orf141Q5JVX7 400 aa29.12■■■□□ 2.25
HOXA3-206ENST00000522788 TUBGCP6Q96RT7 1819 aa29.12■■■□□ 2.25
HOXA3-206ENST00000522788 C5P01031 1676 aa29.1■■■□□ 2.25
HOXA3-206ENST00000522788 ITPK1Q13572 414 aa29.1■■■□□ 2.25
HOXA3-206ENST00000522788 AMIGO3Q86WK7 504 aa29.1■■■□□ 2.25
HOXA3-206ENST00000522788 LINC00116Q8NCU8 138 aa29.1■■■□□ 2.25
HOXA3-206ENST00000522788 ARXQ96QS3 562 aa29.1■■■□□ 2.25
HOXA3-206ENST00000522788 CABP4P57796 275 aa29.09■■■□□ 2.25
HOXA3-206ENST00000522788 FHDC1Q9C0D6 1143 aaPredicted RBP29.09■■■□□ 2.25
HOXA3-206ENST00000522788 AKAP4Q5JQC9 854 aa29.08■■■□□ 2.25
HOXA3-206ENST00000522788 SLC4A9Q96Q91 983 aa29.08■■■□□ 2.25
HOXA3-206ENST00000522788 ATP6V1AP38606 617 aa29.07■■■□□ 2.24
HOXA3-206ENST00000522788 SYT17Q9BSW7 474 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms