RNA–Protein interactions for RNA: ENST00000522778.1

LINC01609-202, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 2 BASIC

Gene LINC01609, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-202ENST00000522778 SMARCA2P51531 1590 aa11.02□□□□□ -0.65
LINC01609-202ENST00000522778 CCDC125Q86Z20 511 aa11.01□□□□□ -0.65
LINC01609-202ENST00000522778 PCDHB11Q9Y5F2 797 aa11.01□□□□□ -0.65
LINC01609-202ENST00000522778 BAZ1AQ9NRL2 1556 aaPredicted RBP11.01□□□□□ -0.65
LINC01609-202ENST00000522778 ATP5J2-PTCD1G3V325 749 aa11□□□□□ -0.65
LINC01609-202ENST00000522778 RNF217Q8TC41 542 aa11□□□□□ -0.65
LINC01609-202ENST00000522778 RIMBP3CA6NJZ7 1639 aa10.99□□□□□ -0.65
LINC01609-202ENST00000522778 RIMBP3BA6NNM3 1639 aa10.99□□□□□ -0.65
LINC01609-202ENST00000522778 RIMBP3Q9UFD9 1639 aa10.99□□□□□ -0.65
LINC01609-202ENST00000522778 VSIG8P0DPA2 414 aa10.99□□□□□ -0.65
LINC01609-202ENST00000522778 CC2D2BQ6DHV5 1058 aa10.99□□□□□ -0.65
LINC01609-202ENST00000522778 KDF1Q8NAX2 398 aaPredicted RBP10.99□□□□□ -0.65
LINC01609-202ENST00000522778 ESF1Q9H501 851 aaKnown RBP10.99□□□□□ -0.65
LINC01609-202ENST00000522778 ERVK-9P63128 1117 aa10.98□□□□□ -0.65
LINC01609-202ENST00000522778 STK17AQ9UEE5 414 aa10.98□□□□□ -0.65
LINC01609-202ENST00000522778 FOXD4L5Q5VV16 416 aaPredicted RBP10.97□□□□□ -0.65
LINC01609-202ENST00000522778 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
LINC01609-202ENST00000522778 GDPD2Q9HCC8 539 aa10.97□□□□□ -0.65
LINC01609-202ENST00000522778 MEN1O00255 615 aa10.96□□□□□ -0.65
LINC01609-202ENST00000522778 ABL2P42684 1182 aa10.96□□□□□ -0.65
LINC01609-202ENST00000522778 SCTRP47872 440 aa10.96□□□□□ -0.65
LINC01609-202ENST00000522778 CYB5RLQ6IPT4 315 aa10.96□□□□□ -0.65
LINC01609-202ENST00000522778 EIF4G2P78344 907 aaKnown RBP eCLIP10.95□□□□□ -0.66
LINC01609-202ENST00000522778 NCAPD3P42695 1498 aa10.94□□□□□ -0.66
LINC01609-202ENST00000522778 IRF5Q13568 498 aa10.94□□□□□ -0.66
LINC01609-202ENST00000522778 CYP2U1Q7Z449 544 aa10.94□□□□□ -0.66
LINC01609-202ENST00000522778 ZSCAN1Q8NBB4 408 aa10.94□□□□□ -0.66
LINC01609-202ENST00000522778 CEP126Q9P2H0 1117 aa10.94□□□□□ -0.66
LINC01609-202ENST00000522778 KIF21AQ7Z4S6 1674 aa10.93□□□□□ -0.66
LINC01609-202ENST00000522778 SLC35F4A4IF30 521 aa10.93□□□□□ -0.66
LINC01609-202ENST00000522778 MCM6Q14566 821 aa10.93□□□□□ -0.66
LINC01609-202ENST00000522778 LYSMD3Q7Z3D4 306 aa10.93□□□□□ -0.66
LINC01609-202ENST00000522778 A0A1W2PRU2 124 aa10.92□□□□□ -0.66
LINC01609-202ENST00000522778 VAC14Q08AM6 782 aa10.92□□□□□ -0.66
LINC01609-202ENST00000522778 PRICKLE2Q7Z3G6 844 aa10.92□□□□□ -0.66
LINC01609-202ENST00000522778 CDC14CA4D256 554 aa10.91□□□□□ -0.66
LINC01609-202ENST00000522778 ITGA6P23229 1130 aa10.91□□□□□ -0.66
LINC01609-202ENST00000522778 RNF144AP50876 292 aaPredicted RBP10.91□□□□□ -0.66
LINC01609-202ENST00000522778 NLRP3Q96P20 1036 aa10.91□□□□□ -0.66
LINC01609-202ENST00000522778 FAM181BA6NEQ2 426 aa10.9□□□□□ -0.66
LINC01609-202ENST00000522778 MYCP01106 439 aaPredicted RBP10.9□□□□□ -0.66
LINC01609-202ENST00000522778 OSBPL3Q9H4L5 887 aa10.9□□□□□ -0.66
LINC01609-202ENST00000522778 ARHGEF10LQ9HCE6 1279 aa10.9□□□□□ -0.66
LINC01609-202ENST00000522778 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
LINC01609-202ENST00000522778 RHOQP17081 205 aa10.89□□□□□ -0.67
LINC01609-202ENST00000522778 SLFNL1Q499Z3 407 aa10.89□□□□□ -0.67
LINC01609-202ENST00000522778 SLC27A3Q5K4L6 730 aa10.89□□□□□ -0.67
LINC01609-202ENST00000522778 CCDC85AQ96PX6 553 aaPredicted RBP10.89□□□□□ -0.67
LINC01609-202ENST00000522778 CDCA7Q9BWT1 371 aaPredicted RBP10.89□□□□□ -0.67
LINC01609-202ENST00000522778 GPC1P35052 558 aa10.88□□□□□ -0.67
LINC01609-202ENST00000522778 RNF135Q8IUD6 432 aa10.88□□□□□ -0.67
LINC01609-202ENST00000522778 RAB6BQ9NRW1 208 aa10.88□□□□□ -0.67
LINC01609-202ENST00000522778 DOLKQ9UPQ8 538 aa10.88□□□□□ -0.67
LINC01609-202ENST00000522778 TRAK2O60296 914 aa10.87□□□□□ -0.67
LINC01609-202ENST00000522778 WASHC4Q2M389 1173 aa10.87□□□□□ -0.67
LINC01609-202ENST00000522778 GPR161Q8N6U8 529 aaKnown RBP10.87□□□□□ -0.67
LINC01609-202ENST00000522778 NANOS1Q8WY41 292 aaKnown RBP10.87□□□□□ -0.67
LINC01609-202ENST00000522778 DCAF1Q9Y4B6 1507 aa10.87□□□□□ -0.67
LINC01609-202ENST00000522778 LORP23490 312 aaPredicted RBP10.86□□□□□ -0.67
LINC01609-202ENST00000522778 CLN3Q13286 438 aa10.86□□□□□ -0.67
LINC01609-202ENST00000522778 VWA5B2Q8N398 1253 aa10.86□□□□□ -0.67
LINC01609-202ENST00000522778 ARHGEF11O15085 1522 aa10.85□□□□□ -0.67
LINC01609-202ENST00000522778 SV2AQ7L0J3 742 aa10.85□□□□□ -0.67
LINC01609-202ENST00000522778 CNTNAP3BQ96NU0 1288 aa10.85□□□□□ -0.67
LINC01609-202ENST00000522778 COL25A1Q9BXS0 654 aaPredicted RBP10.85□□□□□ -0.67
LINC01609-202ENST00000522778 CNTNAP3Q9BZ76 1288 aa10.85□□□□□ -0.67
LINC01609-202ENST00000522778 GNRH1P01148 92 aa10.84□□□□□ -0.67
LINC01609-202ENST00000522778 OXLD1Q5BKU9 147 aa10.84□□□□□ -0.67
LINC01609-202ENST00000522778 PDS5BQ9NTI5 1447 aa10.84□□□□□ -0.67
LINC01609-202ENST00000522778 ZCCHC6Q5VYS8 1495 aaKnown RBP10.83□□□□□ -0.68
LINC01609-202ENST00000522778 SEMA3FQ13275 785 aa10.83□□□□□ -0.68
LINC01609-202ENST00000522778 TSGA10IPQ3SY00 556 aa10.83□□□□□ -0.68
LINC01609-202ENST00000522778 COG6Q9Y2V7 657 aa10.83□□□□□ -0.68
LINC01609-202ENST00000522778 LAMC3Q9Y6N6 1575 aa10.82□□□□□ -0.68
LINC01609-202ENST00000522778 KRT76Q01546 638 aa10.82□□□□□ -0.68
LINC01609-202ENST00000522778 POU4F2Q12837 409 aa10.82□□□□□ -0.68
LINC01609-202ENST00000522778 PHTF2Q8N3S3 785 aa10.82□□□□□ -0.68
LINC01609-202ENST00000522778 ATAD2BQ9ULI0 1458 aa10.81□□□□□ -0.68
LINC01609-202ENST00000522778 USP4Q13107 963 aa10.81□□□□□ -0.68
LINC01609-202ENST00000522778 RIPOR1Q6ZS17 1223 aa10.81□□□□□ -0.68
LINC01609-202ENST00000522778 CNKSR1Q969H4 720 aa10.81□□□□□ -0.68
LINC01609-202ENST00000522778 GRIP2Q9C0E4 1043 aa10.81□□□□□ -0.68
LINC01609-202ENST00000522778 IL2RAP01589 272 aa10.8□□□□□ -0.68
LINC01609-202ENST00000522778 RNFT1Q5M7Z0 435 aa10.8□□□□□ -0.68
LINC01609-202ENST00000522778 WWC1Q8IX03 1113 aa10.8□□□□□ -0.68
LINC01609-202ENST00000522778 ESYT1Q9BSJ8 1104 aa10.8□□□□□ -0.68
LINC01609-202ENST00000522778 CUEDC1Q9NWM3 386 aaPredicted RBP10.8□□□□□ -0.68
LINC01609-202ENST00000522778 SOX11P35716 441 aa10.79□□□□□ -0.68
LINC01609-202ENST00000522778 NBPF10Q6P3W6 841 aaKnown RBP10.79□□□□□ -0.68
LINC01609-202ENST00000522778 NBPF15Q8N660 670 aa10.79□□□□□ -0.68
LINC01609-202ENST00000522778 GAS2L1Q99501 681 aaPredicted RBP10.79□□□□□ -0.68
LINC01609-202ENST00000522778 ESCO1Q5FWF5 840 aa10.78□□□□□ -0.68
LINC01609-202ENST00000522778 TAS1R3Q7RTX0 852 aa10.78□□□□□ -0.68
LINC01609-202ENST00000522778 SIRT1Q96EB6 747 aa10.78□□□□□ -0.68
LINC01609-202ENST00000522778 POM121Q96HA1 1249 aa10.78□□□□□ -0.68
LINC01609-202ENST00000522778 DYRK1BQ9Y463 629 aa10.78□□□□□ -0.68
LINC01609-202ENST00000522778 MRC2Q9UBG0 1479 aa10.77□□□□□ -0.69
LINC01609-202ENST00000522778 WASLO00401 505 aaPredicted RBP10.77□□□□□ -0.69
LINC01609-202ENST00000522778 RAD21O60216 631 aa10.77□□□□□ -0.69
LINC01609-202ENST00000522778 GTF2E1P29083 439 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms