RNA–Protein interactions for RNA: ENST00000522638.1

IGKV3D-34-201, Transcript of immunoglobulin kappa variable 3D-34 (pseudogene), humanhuman

BASIC

Gene IGKV3D-34, Length 302 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-34-201ENST00000522638 KCNQ4P56696 695 aa8.9□□□□□ -0.98
IGKV3D-34-201ENST00000522638 FSTL1Q12841 308 aa8.9□□□□□ -0.98
IGKV3D-34-201ENST00000522638 MSL1Q68DK7 614 aa8.9□□□□□ -0.98
IGKV3D-34-201ENST00000522638 PXDNLA1KZ92 1463 aa8.89□□□□□ -0.99
IGKV3D-34-201ENST00000522638 ZBTB7CA1YPR0 619 aa8.89□□□□□ -0.99
IGKV3D-34-201ENST00000522638 ARHGEF25Q86VW2 580 aa8.88□□□□□ -0.99
IGKV3D-34-201ENST00000522638 CDK19Q9BWU1 502 aa8.88□□□□□ -0.99
IGKV3D-34-201ENST00000522638 CCDC61Q9Y6R9 512 aa8.88□□□□□ -0.99
IGKV3D-34-201ENST00000522638 C4BP0C0L5 1744 aa8.88□□□□□ -0.99
IGKV3D-34-201ENST00000522638 FAM208AQ9UK61 1670 aaKnown RBP8.88□□□□□ -0.99
IGKV3D-34-201ENST00000522638 KCPQ6ZWJ8 1503 aa8.87□□□□□ -0.99
IGKV3D-34-201ENST00000522638 FAM161AQ3B820 660 aa8.87□□□□□ -0.99
IGKV3D-34-201ENST00000522638 VIRMAQ69YN4 1812 aaKnown RBP8.87□□□□□ -0.99
IGKV3D-34-201ENST00000522638 NLRP6P59044 892 aa8.85□□□□□ -0.99
IGKV3D-34-201ENST00000522638 RGPD2P0DJD1 1756 aa8.85□□□□□ -0.99
IGKV3D-34-201ENST00000522638 ANKRD36BQ8N2N9 1353 aa8.85□□□□□ -0.99
IGKV3D-34-201ENST00000522638 PLEKHG2Q9H7P9 1386 aa8.85□□□□□ -0.99
IGKV3D-34-201ENST00000522638 CSB-PGBD3P0DP91 1061 aa8.84□□□□□ -0.99
IGKV3D-34-201ENST00000522638 MON2Q7Z3U7 1717 aa8.84□□□□□ -0.99
IGKV3D-34-201ENST00000522638 MAP2P11137 1827 aaKnown RBP8.84□□□□□ -0.99
IGKV3D-34-201ENST00000522638 ITGB4P16144 1822 aa8.83□□□□□ -1
IGKV3D-34-201ENST00000522638 MSH5O43196 834 aa8.83□□□□□ -1
IGKV3D-34-201ENST00000522638 TIAM2Q8IVF5 1701 aa8.83□□□□□ -1
IGKV3D-34-201ENST00000522638 ERBB3P21860 1342 aa8.82□□□□□ -1
IGKV3D-34-201ENST00000522638 IL2RBP14784 551 aa8.82□□□□□ -1
IGKV3D-34-201ENST00000522638 C16orf71Q8IYS4 520 aaPredicted RBP8.82□□□□□ -1
IGKV3D-34-201ENST00000522638 CCNL1Q9UK58 526 aaPredicted RBP8.82□□□□□ -1
IGKV3D-34-201ENST00000522638 CCDC88AQ3V6T2 1871 aa8.82□□□□□ -1
IGKV3D-34-201ENST00000522638 PDE4DIPQ5VU43 2346 aa8.82□□□□□ -1
IGKV3D-34-201ENST00000522638 AMIGO3Q86WK7 504 aa8.81□□□□□ -1
IGKV3D-34-201ENST00000522638 SMC1BQ8NDV3 1235 aa8.81□□□□□ -1
IGKV3D-34-201ENST00000522638 MPHOSPH9Q99550 1183 aa8.81□□□□□ -1
IGKV3D-34-201ENST00000522638 PRDM10Q9NQV6 1147 aa8.81□□□□□ -1
IGKV3D-34-201ENST00000522638 FOXN1O15353 648 aa8.8□□□□□ -1
IGKV3D-34-201ENST00000522638 C4AP0C0L4 1744 aa8.8□□□□□ -1
IGKV3D-34-201ENST00000522638 PRIM1P49642 420 aaKnown RBP8.79□□□□□ -1
IGKV3D-34-201ENST00000522638 RGS19P49795 217 aa8.79□□□□□ -1
IGKV3D-34-201ENST00000522638 KCNH5Q8NCM2 988 aa8.79□□□□□ -1
IGKV3D-34-201ENST00000522638 C9orf131Q5VYM1 1079 aa8.78□□□□□ -1
IGKV3D-34-201ENST00000522638 FLAD1Q8NFF5 587 aa8.78□□□□□ -1
IGKV3D-34-201ENST00000522638 ABHD8Q96I13 439 aa8.78□□□□□ -1
IGKV3D-34-201ENST00000522638 RRAGCQ9HB90 399 aa8.78□□□□□ -1
IGKV3D-34-201ENST00000522638 KDM2BQ8NHM5 1336 aa8.78□□□□□ -1
IGKV3D-34-201ENST00000522638 MLLT1Q03111 559 aaPredicted RBP8.77□□□□□ -1.01
IGKV3D-34-201ENST00000522638 NLRP2Q9NX02 1062 aa8.77□□□□□ -1.01
IGKV3D-34-201ENST00000522638 USP47Q96K76 1375 aa8.76□□□□□ -1.01
IGKV3D-34-201ENST00000522638 SOX12O15370 315 aa8.76□□□□□ -1.01
IGKV3D-34-201ENST00000522638 ARHGAP27Q6ZUM4 889 aa8.76□□□□□ -1.01
IGKV3D-34-201ENST00000522638 SMIM5Q71RC9 77 aa8.76□□□□□ -1.01
IGKV3D-34-201ENST00000522638 SYTL4Q96C24 671 aaPredicted RBP8.76□□□□□ -1.01
IGKV3D-34-201ENST00000522638 CABP2Q9NPB3 220 aa8.76□□□□□ -1.01
IGKV3D-34-201ENST00000522638 BCS1LQ9Y276 419 aa8.76□□□□□ -1.01
IGKV3D-34-201ENST00000522638 TTC21BQ7Z4L5 1316 aa8.76□□□□□ -1.01
IGKV3D-34-201ENST00000522638 DICER1Q9UPY3 1922 aaKnown RBP8.76□□□□□ -1.01
IGKV3D-34-201ENST00000522638 MEGF6O75095 1541 aa8.75□□□□□ -1.01
IGKV3D-34-201ENST00000522638 KDM6AO15550 1401 aaPredicted RBP8.75□□□□□ -1.01
IGKV3D-34-201ENST00000522638 DDX54Q8TDD1 881 aaKnown RBP8.75□□□□□ -1.01
IGKV3D-34-201ENST00000522638 CABP1Q9NZU7 370 aa8.75□□□□□ -1.01
IGKV3D-34-201ENST00000522638 DLEC1Q9Y238 1755 aa8.75□□□□□ -1.01
IGKV3D-34-201ENST00000522638 THSD7BQ9C0I4 1608 aa8.75□□□□□ -1.01
IGKV3D-34-201ENST00000522638 NSD3Q9BZ95 1437 aa8.74□□□□□ -1.01
IGKV3D-34-201ENST00000522638 TGFB2P61812 414 aa8.74□□□□□ -1.01
IGKV3D-34-201ENST00000522638 SRPK2P78362 688 aaKnown RBP8.74□□□□□ -1.01
IGKV3D-34-201ENST00000522638 ANKRD24Q8TF21 1146 aa8.74□□□□□ -1.01
IGKV3D-34-201ENST00000522638 TTC21AQ8NDW8 1320 aa8.74□□□□□ -1.01
IGKV3D-34-201ENST00000522638 COL5A3P25940 1745 aaPredicted RBP8.74□□□□□ -1.01
IGKV3D-34-201ENST00000522638 USP31Q70CQ4 1352 aa8.73□□□□□ -1.01
IGKV3D-34-201ENST00000522638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.73□□□□□ -1.01
IGKV3D-34-201ENST00000522638 A0A0G2JLW4 131 aa8.73□□□□□ -1.01
IGKV3D-34-201ENST00000522638 CTCFP49711 727 aaPredicted RBP8.73□□□□□ -1.01
IGKV3D-34-201ENST00000522638 CNTNAP1P78357 1384 aa8.73□□□□□ -1.01
IGKV3D-34-201ENST00000522638 PALLDQ8WX93 1383 aa8.73□□□□□ -1.01
IGKV3D-34-201ENST00000522638 FCHSD2O94868 740 aa8.72□□□□□ -1.01
IGKV3D-34-201ENST00000522638 DPEP1P16444 411 aa8.72□□□□□ -1.01
IGKV3D-34-201ENST00000522638 KCNA3P22001 575 aa8.72□□□□□ -1.01
IGKV3D-34-201ENST00000522638 DCAF5Q96JK2 942 aa8.72□□□□□ -1.01
IGKV3D-34-201ENST00000522638 RNF181Q9P0P0 153 aa8.72□□□□□ -1.01
IGKV3D-34-201ENST00000522638 MKRN1Q9UHC7 482 aaKnown RBP8.72□□□□□ -1.01
IGKV3D-34-201ENST00000522638 ZC3H4Q9UPT8 1303 aaKnown RBP8.72□□□□□ -1.01
IGKV3D-34-201ENST00000522638 PHF14O94880 888 aa8.71□□□□□ -1.02
IGKV3D-34-201ENST00000522638 MMP10P09238 476 aa8.71□□□□□ -1.02
IGKV3D-34-201ENST00000522638 SSFA2P28290 1259 aa8.71□□□□□ -1.02
IGKV3D-34-201ENST00000522638 LBX1P52954 281 aa8.71□□□□□ -1.02
IGKV3D-34-201ENST00000522638 DCAF11Q8TEB1 546 aa8.71□□□□□ -1.02
IGKV3D-34-201ENST00000522638 AK7Q96M32 723 aa8.71□□□□□ -1.02
IGKV3D-34-201ENST00000522638 CREBZFQ9NS37 354 aa8.71□□□□□ -1.02
IGKV3D-34-201ENST00000522638 KDM2AQ9Y2K7 1162 aa8.71□□□□□ -1.02
IGKV3D-34-201ENST00000522638 ZNF831Q5JPB2 1677 aa8.71□□□□□ -1.02
IGKV3D-34-201ENST00000522638 HSPA8P11142 646 aaKnown RBP8.7□□□□□ -1.02
IGKV3D-34-201ENST00000522638 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
IGKV3D-34-201ENST00000522638 LTBP1Q14766 1721 aa8.69□□□□□ -1.02
IGKV3D-34-201ENST00000522638 POTECB2RU33 542 aa8.69□□□□□ -1.02
IGKV3D-34-201ENST00000522638 VEGFAP15692 232 aaPredicted RBP8.69□□□□□ -1.02
IGKV3D-34-201ENST00000522638 PPARGC1BQ86YN6 1023 aaKnown RBP8.69□□□□□ -1.02
IGKV3D-34-201ENST00000522638 STAC3Q96MF2 364 aa8.69□□□□□ -1.02
IGKV3D-34-201ENST00000522638 MYH14Q7Z406 1995 aaKnown RBP8.69□□□□□ -1.02
IGKV3D-34-201ENST00000522638 CENPJQ9HC77 1338 aaPredicted RBP8.69□□□□□ -1.02
IGKV3D-34-201ENST00000522638 AFDNP55196 1824 aaKnown RBP8.68□□□□□ -1.02
IGKV3D-34-201ENST00000522638 GLTPD2A6NH11 291 aa8.68□□□□□ -1.02
IGKV3D-34-201ENST00000522638 HMGB2P26583 209 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms