RNA–Protein interactions for RNA: ENST00000522610.5

POLB-213, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 1,341 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-213ENST00000522610 NCAPD2Q15021 1401 aa16.47■□□□□ 0.23
POLB-213ENST00000522610 OVOS2A0A0G2JMS6 1433 aa16.46■□□□□ 0.23
POLB-213ENST00000522610 MTHFSP49914 203 aa16.45■□□□□ 0.22
POLB-213ENST00000522610 MARCH10Q8NA82 808 aaPredicted RBP16.45■□□□□ 0.22
POLB-213ENST00000522610 EXOC5O00471 708 aa16.45■□□□□ 0.22
POLB-213ENST00000522610 EYA1Q99502 592 aa16.45■□□□□ 0.22
POLB-213ENST00000522610 FAM196AQ6ZSG2 479 aa16.44■□□□□ 0.22
POLB-213ENST00000522610 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
POLB-213ENST00000522610 COL3A1P02461 1466 aaPredicted RBP16.43■□□□□ 0.22
POLB-213ENST00000522610 RAPGEF4Q8WZA2 1011 aa16.43■□□□□ 0.22
POLB-213ENST00000522610 PARD3Q8TEW0 1356 aa16.42■□□□□ 0.22
POLB-213ENST00000522610 IGSF1Q8N6C5 1336 aa16.42■□□□□ 0.22
POLB-213ENST00000522610 TNS1Q9HBL0 1735 aaKnown RBP16.42■□□□□ 0.22
POLB-213ENST00000522610 RGPD1P0DJD0 1748 aa16.41■□□□□ 0.22
POLB-213ENST00000522610 SHANK3Q9BYB0 1731 aa16.41■□□□□ 0.22
POLB-213ENST00000522610 PPP2R1AP30153 589 aa16.41■□□□□ 0.22
POLB-213ENST00000522610 IL13P35225 146 aa16.41■□□□□ 0.22
POLB-213ENST00000522610 ZNF316A6NFI3 1004 aaPredicted RBP16.4■□□□□ 0.22
POLB-213ENST00000522610 TRIM37O94972 964 aa16.4■□□□□ 0.22
POLB-213ENST00000522610 TATP17735 454 aaPredicted RBP16.4■□□□□ 0.22
POLB-213ENST00000522610 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
POLB-213ENST00000522610 CCDC125Q86Z20 511 aa16.4■□□□□ 0.22
POLB-213ENST00000522610 BCL9O00512 1426 aa16.39■□□□□ 0.21
POLB-213ENST00000522610 ZCRB1Q8TBF4 217 aaKnown RBP16.39■□□□□ 0.21
POLB-213ENST00000522610 DDX54Q8TDD1 881 aaKnown RBP16.39■□□□□ 0.21
POLB-213ENST00000522610 SF3B2Q13435 895 aaKnown RBP16.38■□□□□ 0.21
POLB-213ENST00000522610 DEFB132Q7Z7B7 95 aa16.38■□□□□ 0.21
POLB-213ENST00000522610 AEBP1Q8IUX7 1158 aa16.38■□□□□ 0.21
POLB-213ENST00000522610 PKD1L3Q7Z443 1732 aa16.37■□□□□ 0.21
POLB-213ENST00000522610 DIAPH1O60610 1272 aaKnown RBP16.36■□□□□ 0.21
POLB-213ENST00000522610 KDRP35968 1356 aa16.36■□□□□ 0.21
POLB-213ENST00000522610 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
POLB-213ENST00000522610 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
POLB-213ENST00000522610 SULT6B1Q6IMI4 303 aa16.35■□□□□ 0.21
POLB-213ENST00000522610 PTF1AQ7RTS3 328 aa16.35■□□□□ 0.21
POLB-213ENST00000522610 NHSQ6T4R5 1651 aa16.35■□□□□ 0.21
POLB-213ENST00000522610 SBF2Q86WG5 1849 aa16.34■□□□□ 0.21
POLB-213ENST00000522610 BAG6P46379 1132 aa16.34■□□□□ 0.21
POLB-213ENST00000522610 ACSBG1Q96GR2 724 aa16.34■□□□□ 0.21
POLB-213ENST00000522610 CFAP53Q96M91 514 aa16.34■□□□□ 0.21
POLB-213ENST00000522610 DOT1LQ8TEK3 1739 aa16.33■□□□□ 0.2
POLB-213ENST00000522610 CYP27B1O15528 508 aa16.33■□□□□ 0.2
POLB-213ENST00000522610 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
POLB-213ENST00000522610 KCNQ2O43526 872 aa16.32■□□□□ 0.2
POLB-213ENST00000522610 APBA3O96018 575 aa16.32■□□□□ 0.2
POLB-213ENST00000522610 HMOX1P09601 288 aa16.32■□□□□ 0.2
POLB-213ENST00000522610 EN1Q05925 392 aaPredicted RBP16.32■□□□□ 0.2
POLB-213ENST00000522610 RALBP1Q15311 655 aa16.32■□□□□ 0.2
POLB-213ENST00000522610 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
POLB-213ENST00000522610 SPG7Q9UQ90 795 aa16.32■□□□□ 0.2
POLB-213ENST00000522610 PLEKHG2Q9H7P9 1386 aa16.32■□□□□ 0.2
POLB-213ENST00000522610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.2
POLB-213ENST00000522610 TOGARAM1Q9Y4F4 1720 aa16.29■□□□□ 0.2
POLB-213ENST00000522610 PHKG2P15735 406 aa16.28■□□□□ 0.2
POLB-213ENST00000522610 EZH2Q15910 746 aaKnown RBP16.28■□□□□ 0.2
POLB-213ENST00000522610 MYBBP1AQ9BQG0 1328 aaKnown RBP16.28■□□□□ 0.2
POLB-213ENST00000522610 PLEKHO1Q53GL0 409 aaPredicted RBP16.27■□□□□ 0.2
POLB-213ENST00000522610 SYTL4Q96C24 671 aaPredicted RBP16.27■□□□□ 0.2
POLB-213ENST00000522610 CAMKK2Q96RR4 588 aa16.27■□□□□ 0.2
POLB-213ENST00000522610 PRKRIP1Q9H875 184 aaPredicted RBP16.27■□□□□ 0.2
POLB-213ENST00000522610 PRIM1P49642 420 aaKnown RBP16.26■□□□□ 0.19
POLB-213ENST00000522610 ZNF530Q6P9A1 599 aaPredicted RBP16.26■□□□□ 0.19
POLB-213ENST00000522610 IFNL2Q8IZJ0 200 aa16.26■□□□□ 0.19
POLB-213ENST00000522610 RGPD3A6NKT7 1758 aaPredicted RBP16.26■□□□□ 0.19
POLB-213ENST00000522610 RGPD4Q7Z3J3 1758 aa16.26■□□□□ 0.19
POLB-213ENST00000522610 BTAF1O14981 1849 aa16.26■□□□□ 0.19
POLB-213ENST00000522610 RREB1Q92766 1687 aa16.25■□□□□ 0.19
POLB-213ENST00000522610 NKX1-1Q15270 411 aaPredicted RBP16.25■□□□□ 0.19
POLB-213ENST00000522610 AMOTQ4VCS5 1084 aa16.25■□□□□ 0.19
POLB-213ENST00000522610 NUDCQ9Y266 331 aa16.25■□□□□ 0.19
POLB-213ENST00000522610 U2AF1L5P0DN76 240 aaPredicted RBP16.24■□□□□ 0.19
POLB-213ENST00000522610 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.19
POLB-213ENST00000522610 KDM6AO15550 1401 aaPredicted RBP16.24■□□□□ 0.19
POLB-213ENST00000522610 SRCAPQ6ZRS2 3230 aa16.24■□□□□ 0.19
POLB-213ENST00000522610 RSPH6AQ9H0K4 717 aa16.23■□□□□ 0.19
POLB-213ENST00000522610 NUP188Q5SRE5 1749 aa16.23■□□□□ 0.19
POLB-213ENST00000522610 PLSCR1O15162 318 aa16.22■□□□□ 0.19
POLB-213ENST00000522610 PRKAR2BP31323 418 aa16.22■□□□□ 0.19
POLB-213ENST00000522610 C1orf141Q5JVX7 400 aa16.22■□□□□ 0.19
POLB-213ENST00000522610 MTHFSDQ2M296 383 aaKnown RBP16.21■□□□□ 0.19
POLB-213ENST00000522610 MPRIPQ6WCQ1 1025 aa16.21■□□□□ 0.19
POLB-213ENST00000522610 ABCB7O75027 752 aa16.2■□□□□ 0.18
POLB-213ENST00000522610 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
POLB-213ENST00000522610 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
POLB-213ENST00000522610 TXNRD1Q16881 649 aa16.19■□□□□ 0.18
POLB-213ENST00000522610 AKAP4Q5JQC9 854 aa16.19■□□□□ 0.18
POLB-213ENST00000522610 PROM2Q8N271 834 aa16.19■□□□□ 0.18
POLB-213ENST00000522610 DCAF5Q96JK2 942 aa16.19■□□□□ 0.18
POLB-213ENST00000522610 PHACTR3Q96KR7 559 aa16.19■□□□□ 0.18
POLB-213ENST00000522610 PIGBQ92521 554 aa16.19■□□□□ 0.18
POLB-213ENST00000522610 TMOD3Q9NYL9 352 aa16.19■□□□□ 0.18
POLB-213ENST00000522610 ITGB4P16144 1822 aa16.18■□□□□ 0.18
POLB-213ENST00000522610 FCHSD2O94868 740 aa16.18■□□□□ 0.18
POLB-213ENST00000522610 PALLDQ8WX93 1383 aa16.17■□□□□ 0.18
POLB-213ENST00000522610 MAP3K5Q99683 1374 aa16.16■□□□□ 0.18
POLB-213ENST00000522610 PAPPAQ13219 1627 aa16.16■□□□□ 0.18
POLB-213ENST00000522610 ERVV-2B6SEH9 535 aa16.16■□□□□ 0.18
POLB-213ENST00000522610 ANP32CO43423 234 aa16.16■□□□□ 0.18
POLB-213ENST00000522610 GAS2L2Q8NHY3 880 aa16.16■□□□□ 0.18
POLB-213ENST00000522610 MRC1P22897 1456 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms