RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 PTCH1Q13635 1447 aa11.95□□□□□ -0.5
PVT1-213ENST00000522414 ROBO2Q9HCK4 1378 aa11.95□□□□□ -0.5
PVT1-213ENST00000522414 IFT172Q9UG01 1749 aa11.95□□□□□ -0.5
PVT1-213ENST00000522414 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
PVT1-213ENST00000522414 LRRC59Q96AG4 307 aaKnown RBP11.95□□□□□ -0.5
PVT1-213ENST00000522414 STK26Q9P289 416 aa11.95□□□□□ -0.5
PVT1-213ENST00000522414 LRP6O75581 1613 aa11.95□□□□□ -0.5
PVT1-213ENST00000522414 LAMC1P11047 1609 aa11.95□□□□□ -0.5
PVT1-213ENST00000522414 NALCNQ8IZF0 1738 aa11.94□□□□□ -0.5
PVT1-213ENST00000522414 SHPRHQ149N8 1683 aa11.94□□□□□ -0.5
PVT1-213ENST00000522414 NHSL1Q5SYE7 1610 aa11.94□□□□□ -0.5
PVT1-213ENST00000522414 ADGRF5Q8IZF2 1346 aa11.94□□□□□ -0.5
PVT1-213ENST00000522414 GRXCR2A6NFK2 248 aa11.94□□□□□ -0.5
PVT1-213ENST00000522414 NUDT18Q6ZVK8 323 aa11.94□□□□□ -0.5
PVT1-213ENST00000522414 ZNF772Q68DY9 489 aaPredicted RBP11.93□□□□□ -0.5
PVT1-213ENST00000522414 TMEM132EQ6IEE7 984 aa11.93□□□□□ -0.5
PVT1-213ENST00000522414 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
PVT1-213ENST00000522414 ADGRL3Q9HAR2 1447 aa11.93□□□□□ -0.5
PVT1-213ENST00000522414 RNF40O75150 1001 aa11.92□□□□□ -0.5
PVT1-213ENST00000522414 SPATA31E1Q6ZUB1 1445 aa11.92□□□□□ -0.5
PVT1-213ENST00000522414 ADAMTS2O95450 1211 aa11.91□□□□□ -0.5
PVT1-213ENST00000522414 OSBPP22059 807 aa11.91□□□□□ -0.5
PVT1-213ENST00000522414 ASXL1Q8IXJ9 1541 aa11.91□□□□□ -0.5
PVT1-213ENST00000522414 NUTM2FA1L443 756 aa11.9□□□□□ -0.5
PVT1-213ENST00000522414 RXRBP28702 533 aa11.9□□□□□ -0.5
PVT1-213ENST00000522414 C8orf37Q96NL8 207 aa11.9□□□□□ -0.5
PVT1-213ENST00000522414 SETD5Q9C0A6 1442 aa11.9□□□□□ -0.5
PVT1-213ENST00000522414 C1orf167Q5SNV9 1468 aa11.89□□□□□ -0.51
PVT1-213ENST00000522414 AFF2P51816 1311 aa11.89□□□□□ -0.51
PVT1-213ENST00000522414 ESCO1Q5FWF5 840 aa11.89□□□□□ -0.51
PVT1-213ENST00000522414 PDZRN3Q9UPQ7 1066 aa11.89□□□□□ -0.51
PVT1-213ENST00000522414 CCDC144AA2RUR9 1427 aa11.88□□□□□ -0.51
PVT1-213ENST00000522414 TECPR2O15040 1411 aa11.88□□□□□ -0.51
PVT1-213ENST00000522414 XPCQ01831 940 aaPredicted RBP11.88□□□□□ -0.51
PVT1-213ENST00000522414 NGLY1Q96IV0 654 aa11.88□□□□□ -0.51
PVT1-213ENST00000522414 QTRT2Q9H974 415 aaKnown RBP11.88□□□□□ -0.51
PVT1-213ENST00000522414 ARIH1Q9Y4X5 557 aaPredicted RBP11.88□□□□□ -0.51
PVT1-213ENST00000522414 KNDC1Q76NI1 1749 aa11.88□□□□□ -0.51
PVT1-213ENST00000522414 ACIN1Q9UKV3 1341 aaKnown RBP11.87□□□□□ -0.51
PVT1-213ENST00000522414 FOXO3O43524 673 aa11.87□□□□□ -0.51
PVT1-213ENST00000522414 COPS2P61201 443 aa11.87□□□□□ -0.51
PVT1-213ENST00000522414 E2F4Q16254 413 aa11.87□□□□□ -0.51
PVT1-213ENST00000522414 TTC13Q8NBP0 860 aa11.87□□□□□ -0.51
PVT1-213ENST00000522414 PNPLA6Q8IY17 1366 aa11.87□□□□□ -0.51
PVT1-213ENST00000522414 CDC42BPGQ6DT37 1551 aa11.87□□□□□ -0.51
PVT1-213ENST00000522414 SOS2Q07890 1332 aaPredicted RBP11.86□□□□□ -0.51
PVT1-213ENST00000522414 SWT1Q5T5J6 900 aaKnown RBP11.86□□□□□ -0.51
PVT1-213ENST00000522414 ZNF787Q6DD87 383 aa11.86□□□□□ -0.51
PVT1-213ENST00000522414 RBM27Q9P2N5 1060 aaKnown RBP11.86□□□□□ -0.51
PVT1-213ENST00000522414 NRXN1Q9ULB1 1477 aa11.86□□□□□ -0.51
PVT1-213ENST00000522414 PLEKHH1Q9ULM0 1364 aa11.85□□□□□ -0.51
PVT1-213ENST00000522414 CFAP70Q5T0N1 1121 aa11.85□□□□□ -0.51
PVT1-213ENST00000522414 BBXQ8WY36 941 aaPredicted RBP11.85□□□□□ -0.51
PVT1-213ENST00000522414 NPDC1Q9NQX5 325 aaPredicted RBP11.85□□□□□ -0.51
PVT1-213ENST00000522414 PIK3C2GO75747 1445 aa11.85□□□□□ -0.51
PVT1-213ENST00000522414 ANKRD30BQ9BXX2 1392 aa11.84□□□□□ -0.51
PVT1-213ENST00000522414 C14orf93Q9H972 538 aaKnown RBP11.84□□□□□ -0.51
PVT1-213ENST00000522414 LRPPRCP42704 1394 aaKnown RBP11.83□□□□□ -0.52
PVT1-213ENST00000522414 ABCC11Q96J66 1382 aa11.83□□□□□ -0.52
PVT1-213ENST00000522414 PADI6Q6TGC4 694 aa11.83□□□□□ -0.52
PVT1-213ENST00000522414 MYOM2P54296 1465 aa11.83□□□□□ -0.52
PVT1-213ENST00000522414 RBM6P78332 1123 aaKnown RBP11.82□□□□□ -0.52
PVT1-213ENST00000522414 SAFB2Q14151 953 aaKnown RBP eCLIP11.82□□□□□ -0.52
PVT1-213ENST00000522414 TRIM67Q6ZTA4 783 aa11.82□□□□□ -0.52
PVT1-213ENST00000522414 EMID1Q96A84 441 aaPredicted RBP11.82□□□□□ -0.52
PVT1-213ENST00000522414 USP21Q9UK80 565 aa11.82□□□□□ -0.52
PVT1-213ENST00000522414 RAB3GAP2Q9H2M9 1393 aa11.81□□□□□ -0.52
PVT1-213ENST00000522414 KDM2AQ9Y2K7 1162 aa11.81□□□□□ -0.52
PVT1-213ENST00000522414 COL22A1Q8NFW1 1626 aaPredicted RBP11.81□□□□□ -0.52
PVT1-213ENST00000522414 FNBP4Q8N3X1 1017 aaPredicted RBP11.8□□□□□ -0.52
PVT1-213ENST00000522414 ZNF775Q96BV0 537 aaPredicted RBP11.8□□□□□ -0.52
PVT1-213ENST00000522414 NPHP3Q7Z494 1330 aa11.8□□□□□ -0.52
PVT1-213ENST00000522414 YTHDC2Q9H6S0 1430 aaKnown RBP11.79□□□□□ -0.52
PVT1-213ENST00000522414 ZPR1O75312 459 aa11.79□□□□□ -0.52
PVT1-213ENST00000522414 KRT28Q7Z3Y7 464 aa11.79□□□□□ -0.52
PVT1-213ENST00000522414 SIRT1Q96EB6 747 aa11.79□□□□□ -0.52
PVT1-213ENST00000522414 PRAM1Q96QH2 718 aa11.79□□□□□ -0.52
PVT1-213ENST00000522414 GGCXP38435 758 aa11.78□□□□□ -0.52
PVT1-213ENST00000522414 SLF2Q8IX21 1173 aa11.78□□□□□ -0.52
PVT1-213ENST00000522414 EYA1Q99502 592 aa11.78□□□□□ -0.52
PVT1-213ENST00000522414 TMUB1Q9BVT8 246 aa11.78□□□□□ -0.52
PVT1-213ENST00000522414 FMN2Q9NZ56 1722 aa11.77□□□□□ -0.52
PVT1-213ENST00000522414 DCAF11Q8TEB1 546 aa11.77□□□□□ -0.53
PVT1-213ENST00000522414 POGKQ9P215 609 aa11.77□□□□□ -0.53
PVT1-213ENST00000522414 TRPC5Q9UL62 973 aaPredicted RBP11.77□□□□□ -0.53
PVT1-213ENST00000522414 TRAK1Q9UPV9 953 aa11.77□□□□□ -0.53
PVT1-213ENST00000522414 SRCAPQ6ZRS2 3230 aa11.77□□□□□ -0.53
PVT1-213ENST00000522414 DHX57Q6P158 1386 aaKnown RBP11.77□□□□□ -0.53
PVT1-213ENST00000522414 CDK12Q9NYV4 1490 aaPredicted RBP11.76□□□□□ -0.53
PVT1-213ENST00000522414 CABLES1Q8TDN4 633 aa11.76□□□□□ -0.53
PVT1-213ENST00000522414 PXDNQ92626 1479 aa11.76□□□□□ -0.53
PVT1-213ENST00000522414 DLC1Q96QB1 1528 aa11.76□□□□□ -0.53
PVT1-213ENST00000522414 ADGRB1O14514 1584 aa11.75□□□□□ -0.53
PVT1-213ENST00000522414 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
PVT1-213ENST00000522414 RNF223E7ERA6 249 aa11.75□□□□□ -0.53
PVT1-213ENST00000522414 HRCP23327 699 aa11.75□□□□□ -0.53
PVT1-213ENST00000522414 PSME1Q06323 249 aa11.75□□□□□ -0.53
PVT1-213ENST00000522414 PMFBP1Q8TBY8 1022 aa11.75□□□□□ -0.53
PVT1-213ENST00000522414 HIRIP3Q9BW71 556 aaPredicted RBP11.75□□□□□ -0.53
PVT1-213ENST00000522414 SPATA31A3Q5VYP0 1347 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms