RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 IL2RBP14784 551 aa16.29■□□□□ 0.2
PABPC1-219ENST00000522387 PNNQ9H307 717 aaKnown RBP16.29■□□□□ 0.2
PABPC1-219ENST00000522387 ABCC6O95255 1503 aa16.28■□□□□ 0.2
PABPC1-219ENST00000522387 SPATA31A5Q5VU36 1347 aa16.28■□□□□ 0.2
PABPC1-219ENST00000522387 SPATA31A7Q8IWB4 1347 aa16.28■□□□□ 0.2
PABPC1-219ENST00000522387 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
PABPC1-219ENST00000522387 NRAPQ86VF7 1730 aa16.27■□□□□ 0.2
PABPC1-219ENST00000522387 MCM10Q7L590 875 aa16.27■□□□□ 0.2
PABPC1-219ENST00000522387 VPS72Q15906 364 aa16.27■□□□□ 0.19
PABPC1-219ENST00000522387 ZNF530Q6P9A1 599 aaPredicted RBP16.27■□□□□ 0.19
PABPC1-219ENST00000522387 FAM208AQ9UK61 1670 aaKnown RBP16.26■□□□□ 0.19
PABPC1-219ENST00000522387 GJD4Q96KN9 370 aaPredicted RBP16.26■□□□□ 0.19
PABPC1-219ENST00000522387 NFE2L2Q16236 605 aa16.25■□□□□ 0.19
PABPC1-219ENST00000522387 FAM182BQ5T319 152 aa16.25■□□□□ 0.19
PABPC1-219ENST00000522387 MPRIPQ6WCQ1 1025 aa16.25■□□□□ 0.19
PABPC1-219ENST00000522387 NWD2Q9ULI1 1742 aa16.25■□□□□ 0.19
PABPC1-219ENST00000522387 PLEKHO1Q53GL0 409 aaPredicted RBP16.25■□□□□ 0.19
PABPC1-219ENST00000522387 TRPC5Q9UL62 973 aaPredicted RBP16.25■□□□□ 0.19
PABPC1-219ENST00000522387 KAT6BQ8WYB5 2073 aa16.25■□□□□ 0.19
PABPC1-219ENST00000522387 TSHZ2Q9NRE2 1034 aa16.24■□□□□ 0.19
PABPC1-219ENST00000522387 ZCRB1Q8TBF4 217 aaKnown RBP16.24■□□□□ 0.19
PABPC1-219ENST00000522387 CDCA7LQ96GN5 454 aa16.24■□□□□ 0.19
PABPC1-219ENST00000522387 RGS17Q9UGC6 210 aaPredicted RBP16.24■□□□□ 0.19
PABPC1-219ENST00000522387 TRIM35Q9UPQ4 493 aa16.24■□□□□ 0.19
PABPC1-219ENST00000522387 LAS1LQ9Y4W2 734 aaKnown RBP16.24■□□□□ 0.19
PABPC1-219ENST00000522387 CYP27B1O15528 508 aa16.23■□□□□ 0.19
PABPC1-219ENST00000522387 C1orf141Q5JVX7 400 aa16.23■□□□□ 0.19
PABPC1-219ENST00000522387 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
PABPC1-219ENST00000522387 LGR6Q9HBX8 967 aa16.23■□□□□ 0.19
PABPC1-219ENST00000522387 NCAPD2Q15021 1401 aa16.22■□□□□ 0.19
PABPC1-219ENST00000522387 GAS2L2Q8NHY3 880 aa16.22■□□□□ 0.19
PABPC1-219ENST00000522387 SPG7Q9UQ90 795 aa16.22■□□□□ 0.19
PABPC1-219ENST00000522387 EXOC5O00471 708 aa16.22■□□□□ 0.19
PABPC1-219ENST00000522387 DDB1Q16531 1140 aa16.22■□□□□ 0.19
PABPC1-219ENST00000522387 RTF1Q92541 710 aaKnown RBP16.22■□□□□ 0.19
PABPC1-219ENST00000522387 GNAT3A8MTJ3 354 aa16.21■□□□□ 0.19
PABPC1-219ENST00000522387 AMOTQ4VCS5 1084 aa16.21■□□□□ 0.19
PABPC1-219ENST00000522387 SPINK5Q9NQ38 1064 aaPredicted RBP16.21■□□□□ 0.19
PABPC1-219ENST00000522387 DLG5Q8TDM6 1919 aa16.21■□□□□ 0.18
PABPC1-219ENST00000522387 ZNF772Q68DY9 489 aaPredicted RBP16.2■□□□□ 0.18
PABPC1-219ENST00000522387 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
PABPC1-219ENST00000522387 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
PABPC1-219ENST00000522387 POTEAQ6S8J7 498 aa16.2■□□□□ 0.18
PABPC1-219ENST00000522387 THRAP3Q9Y2W1 955 aaKnown RBP16.19■□□□□ 0.18
PABPC1-219ENST00000522387 PHKG2P15735 406 aa16.19■□□□□ 0.18
PABPC1-219ENST00000522387 IL17REQ8NFR9 667 aa16.19■□□□□ 0.18
PABPC1-219ENST00000522387 ZBED9Q6R2W3 1325 aa16.18■□□□□ 0.18
PABPC1-219ENST00000522387 IFNL2Q8IZJ0 200 aa16.18■□□□□ 0.18
PABPC1-219ENST00000522387 ATRNO75882 1429 aa16.18■□□□□ 0.18
PABPC1-219ENST00000522387 AKAP4Q5JQC9 854 aa16.18■□□□□ 0.18
PABPC1-219ENST00000522387 SEPT12Q8IYM1 358 aa16.18■□□□□ 0.18
PABPC1-219ENST00000522387 GLI3P10071 1580 aa16.18■□□□□ 0.18
PABPC1-219ENST00000522387 BARGINQ6ZT62 677 aa16.17■□□□□ 0.18
PABPC1-219ENST00000522387 SYTL4Q96C24 671 aaPredicted RBP16.17■□□□□ 0.18
PABPC1-219ENST00000522387 MAP3K5Q99683 1374 aa16.17■□□□□ 0.18
PABPC1-219ENST00000522387 PCDH11XQ9BZA7 1347 aa16.17■□□□□ 0.18
PABPC1-219ENST00000522387 PCDH11YQ9BZA8 1340 aa16.17■□□□□ 0.18
PABPC1-219ENST00000522387 DISP2A7MBM2 1401 aa16.17■□□□□ 0.18
PABPC1-219ENST00000522387 PDE3BQ13370 1112 aa16.17■□□□□ 0.18
PABPC1-219ENST00000522387 TSR2Q969E8 191 aaKnown RBP16.16■□□□□ 0.18
PABPC1-219ENST00000522387 ACSBG1Q96GR2 724 aa16.16■□□□□ 0.18
PABPC1-219ENST00000522387 FKBP8Q14318 412 aa16.16■□□□□ 0.18
PABPC1-219ENST00000522387 MARCH10Q8NA82 808 aaPredicted RBP16.16■□□□□ 0.18
PABPC1-219ENST00000522387 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.15■□□□□ 0.18
PABPC1-219ENST00000522387 PARP4Q9UKK3 1724 aaKnown RBP16.15■□□□□ 0.18
PABPC1-219ENST00000522387 RXRBP28702 533 aa16.15■□□□□ 0.18
PABPC1-219ENST00000522387 GOLGA2Q08379 1002 aa16.15■□□□□ 0.18
PABPC1-219ENST00000522387 RBM6P78332 1123 aaKnown RBP16.14■□□□□ 0.18
PABPC1-219ENST00000522387 NFATC2IPQ8NCF5 419 aa16.14■□□□□ 0.18
PABPC1-219ENST00000522387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.14■□□□□ 0.186e-20■□□□□ 10.8
PABPC1-219ENST00000522387 ZNF521Q96K83 1311 aa16.14■□□□□ 0.17
PABPC1-219ENST00000522387 RNMTO43148 476 aaKnown RBP16.13■□□□□ 0.17
PABPC1-219ENST00000522387 LMOD3Q0VAK6 560 aa16.13■□□□□ 0.17
PABPC1-219ENST00000522387 TEFQ10587 303 aa16.13■□□□□ 0.17
PABPC1-219ENST00000522387 CDCA7Q9BWT1 371 aaPredicted RBP16.13■□□□□ 0.17
PABPC1-219ENST00000522387 KDM6AO15550 1401 aaPredicted RBP16.12■□□□□ 0.17
PABPC1-219ENST00000522387 ELL2O00472 640 aaPredicted RBP16.12■□□□□ 0.17
PABPC1-219ENST00000522387 CCDC27Q2M243 656 aa16.12■□□□□ 0.17
PABPC1-219ENST00000522387 PKD1L3Q7Z443 1732 aa16.11■□□□□ 0.17
PABPC1-219ENST00000522387 SHANK3Q9BYB0 1731 aa16.11■□□□□ 0.17
PABPC1-219ENST00000522387 SLC39A6Q13433 755 aa16.11■□□□□ 0.17
PABPC1-219ENST00000522387 TNS2Q63HR2 1409 aa16.11■□□□□ 0.17
PABPC1-219ENST00000522387 WNK3Q9BYP7 1800 aa16.11■□□□□ 0.17
PABPC1-219ENST00000522387 DCAF5Q96JK2 942 aa16.11■□□□□ 0.17
PABPC1-219ENST00000522387 LRRC37A3O60309 1634 aa16.11■□□□□ 0.17
PABPC1-219ENST00000522387 KCNQ2O43526 872 aa16.1■□□□□ 0.17
PABPC1-219ENST00000522387 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
PABPC1-219ENST00000522387 KCNQ3O43525 872 aa16.1■□□□□ 0.17
PABPC1-219ENST00000522387 PRIM1P49642 420 aaKnown RBP16.1■□□□□ 0.17
PABPC1-219ENST00000522387 CABP4P57796 275 aa16.1■□□□□ 0.17
PABPC1-219ENST00000522387 PTF1AQ7RTS3 328 aa16.1■□□□□ 0.17
PABPC1-219ENST00000522387 ONECUT3O60422 494 aaPredicted RBP16.09■□□□□ 0.17
PABPC1-219ENST00000522387 WDR63Q8IWG1 891 aa16.09■□□□□ 0.17
PABPC1-219ENST00000522387 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
PABPC1-219ENST00000522387 BTBD11A6QL63 1104 aa16.08■□□□□ 0.17
PABPC1-219ENST00000522387 NEFLP07196 543 aa16.08■□□□□ 0.17
PABPC1-219ENST00000522387 SLFN5Q08AF3 891 aa16.08■□□□□ 0.17
PABPC1-219ENST00000522387 TSPYL4Q9UJ04 414 aa16.08■□□□□ 0.17
PABPC1-219ENST00000522387 IRX6P78412 446 aaPredicted RBP16.08■□□□□ 0.16
PABPC1-219ENST00000522387 SLC52A2Q9HAB3 445 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms