RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 SRPK2P78362 688 aaKnown RBP11.66□□□□□ -0.54
VPS13B-210ENST00000521932 NUDT16Q96DE0 195 aaKnown RBP11.66□□□□□ -0.54
VPS13B-210ENST00000521932 ORAI2Q96SN7 254 aa11.66□□□□□ -0.54
VPS13B-210ENST00000521932 ZBED2Q9BTP6 218 aa11.66□□□□□ -0.54
VPS13B-210ENST00000521932 FMN2Q9NZ56 1722 aa11.66□□□□□ -0.54
VPS13B-210ENST00000521932 CDCA8Q53HL2 280 aa11.65□□□□□ -0.54
VPS13B-210ENST00000521932 ESCO1Q5FWF5 840 aa11.65□□□□□ -0.54
VPS13B-210ENST00000521932 BRINP3Q76B58 766 aa11.65□□□□□ -0.54
VPS13B-210ENST00000521932 FBXO41Q8TF61 875 aa11.65□□□□□ -0.54
VPS13B-210ENST00000521932 PLEKHG3A1L390 1219 aa11.64□□□□□ -0.55
VPS13B-210ENST00000521932 PRIM1P49642 420 aaKnown RBP11.64□□□□□ -0.55
VPS13B-210ENST00000521932 SLC4A5Q9BY07 1137 aa11.64□□□□□ -0.55
VPS13B-210ENST00000521932 DISP3Q9P2K9 1392 aa11.64□□□□□ -0.55
VPS13B-210ENST00000521932 USP32Q8NFA0 1604 aa11.64□□□□□ -0.55
VPS13B-210ENST00000521932 ATP7BP35670 1465 aa11.63□□□□□ -0.55
VPS13B-210ENST00000521932 PIP4K2BP78356 416 aa11.63□□□□□ -0.55
VPS13B-210ENST00000521932 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
VPS13B-210ENST00000521932 ATAD2Q6PL18 1390 aa11.63□□□□□ -0.55
VPS13B-210ENST00000521932 SPDYE16A6NNV3 312 aaPredicted RBP11.62□□□□□ -0.55
VPS13B-210ENST00000521932 C11orf95C9JLR9 678 aaPredicted RBP11.62□□□□□ -0.55
VPS13B-210ENST00000521932 CABP1Q9NZU7 370 aa11.62□□□□□ -0.55
VPS13B-210ENST00000521932 PRKCSHP14314 528 aaPredicted RBP11.61□□□□□ -0.55
VPS13B-210ENST00000521932 EPAS1Q99814 870 aa11.61□□□□□ -0.55
VPS13B-210ENST00000521932 ROBO1Q9Y6N7 1651 aa11.6□□□□□ -0.55
VPS13B-210ENST00000521932 POLR3AO14802 1390 aaPredicted RBP11.6□□□□□ -0.55
VPS13B-210ENST00000521932 PPP1R3GB7ZBB8 358 aa11.6□□□□□ -0.55
VPS13B-210ENST00000521932 BHMG1C9JSJ3 638 aaPredicted RBP11.6□□□□□ -0.55
VPS13B-210ENST00000521932 FOXO3O43524 673 aa11.6□□□□□ -0.55
VPS13B-210ENST00000521932 PMFBP1Q8TBY8 1022 aa11.6□□□□□ -0.55
VPS13B-210ENST00000521932 KCNV2Q8TDN2 545 aa11.6□□□□□ -0.55
VPS13B-210ENST00000521932 PPIP5K1Q6PFW1 1433 aa11.6□□□□□ -0.55
VPS13B-210ENST00000521932 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
VPS13B-210ENST00000521932 RGPD8O14715 1765 aaPredicted RBP11.59□□□□□ -0.55
VPS13B-210ENST00000521932 NINLQ9Y2I6 1382 aa11.59□□□□□ -0.55
VPS13B-210ENST00000521932 NBR1Q14596 966 aa11.59□□□□□ -0.55
VPS13B-210ENST00000521932 PROX2Q3B8N5 592 aa11.59□□□□□ -0.55
VPS13B-210ENST00000521932 C6orf132Q5T0Z8 1188 aa11.59□□□□□ -0.55
VPS13B-210ENST00000521932 SLC12A5Q9H2X9 1139 aa11.59□□□□□ -0.55
VPS13B-210ENST00000521932 ACEP12821 1306 aa11.59□□□□□ -0.55
VPS13B-210ENST00000521932 SOS2Q07890 1332 aaPredicted RBP11.59□□□□□ -0.55
VPS13B-210ENST00000521932 TOPAZ1Q8N9V7 1692 aa11.59□□□□□ -0.55
VPS13B-210ENST00000521932 ITSN1Q15811 1721 aa11.57□□□□□ -0.56
VPS13B-210ENST00000521932 KIF1AQ12756 1690 aa11.57□□□□□ -0.56
VPS13B-210ENST00000521932 EN1Q05925 392 aaPredicted RBP11.57□□□□□ -0.56
VPS13B-210ENST00000521932 PSME1Q06323 249 aa11.57□□□□□ -0.56
VPS13B-210ENST00000521932 TSR1Q2NL82 804 aaKnown RBP11.57□□□□□ -0.56
VPS13B-210ENST00000521932 NGDNQ8NEJ9 315 aaKnown RBP11.57□□□□□ -0.56
VPS13B-210ENST00000521932 DDX17Q92841 729 aaKnown RBP11.57□□□□□ -0.56
VPS13B-210ENST00000521932 CPSF1Q10570 1443 aaKnown RBP11.57□□□□□ -0.56
VPS13B-210ENST00000521932 KIF7Q2M1P5 1343 aa11.57□□□□□ -0.56
VPS13B-210ENST00000521932 WASHC2AQ641Q2 1341 aa11.57□□□□□ -0.56
VPS13B-210ENST00000521932 AHDC1Q5TGY3 1603 aaPredicted RBP11.57□□□□□ -0.56
VPS13B-210ENST00000521932 KRT28Q7Z3Y7 464 aa11.56□□□□□ -0.56
VPS13B-210ENST00000521932 TMC1Q8TDI8 760 aa11.56□□□□□ -0.56
VPS13B-210ENST00000521932 NHSL1Q5SYE7 1610 aa11.56□□□□□ -0.56
VPS13B-210ENST00000521932 CD163L1Q9NR16 1453 aa11.56□□□□□ -0.56
VPS13B-210ENST00000521932 BRD4O60885 1362 aaPredicted RBP11.55□□□□□ -0.56
VPS13B-210ENST00000521932 LRRC59Q96AG4 307 aaKnown RBP11.55□□□□□ -0.56
VPS13B-210ENST00000521932 TERF2IPQ9NYB0 399 aa11.55□□□□□ -0.56
VPS13B-210ENST00000521932 PXDNQ92626 1479 aa11.55□□□□□ -0.56
VPS13B-210ENST00000521932 CCDC7Q96M83 1385 aa11.54□□□□□ -0.56
VPS13B-210ENST00000521932 GRXCR2A6NFK2 248 aa11.54□□□□□ -0.56
VPS13B-210ENST00000521932 HSPA1LP34931 641 aa11.54□□□□□ -0.56
VPS13B-210ENST00000521932 HDGFL2Q7Z4V5 671 aaPredicted RBP11.54□□□□□ -0.56
VPS13B-210ENST00000521932 SBNO1A3KN83 1393 aa11.54□□□□□ -0.56
VPS13B-210ENST00000521932 ANKRD36BQ8N2N9 1353 aa11.54□□□□□ -0.56
VPS13B-210ENST00000521932 SSH2Q76I76 1423 aa11.53□□□□□ -0.56
VPS13B-210ENST00000521932 OSBPP22059 807 aa11.53□□□□□ -0.56
VPS13B-210ENST00000521932 TPRNQ4KMQ1 711 aa11.53□□□□□ -0.56
VPS13B-210ENST00000521932 SPATA31A3Q5VYP0 1347 aa11.53□□□□□ -0.56
VPS13B-210ENST00000521932 A0A1W2PP64 1363 aa11.53□□□□□ -0.56
VPS13B-210ENST00000521932 USP6P35125 1406 aa11.52□□□□□ -0.56
VPS13B-210ENST00000521932 XPCQ01831 940 aaPredicted RBP11.52□□□□□ -0.57
VPS13B-210ENST00000521932 KCTD12Q96CX2 325 aaKnown RBP11.52□□□□□ -0.57
VPS13B-210ENST00000521932 KTN1Q86UP2 1357 aaKnown RBP11.52□□□□□ -0.57
VPS13B-210ENST00000521932 COL16A1Q07092 1604 aaPredicted RBP11.51□□□□□ -0.57
VPS13B-210ENST00000521932 MAP3K7O43318 606 aa11.51□□□□□ -0.57
VPS13B-210ENST00000521932 ARHGEF1Q92888 912 aaKnown RBP11.51□□□□□ -0.57
VPS13B-210ENST00000521932 POLR3GLQ9BT43 218 aa11.51□□□□□ -0.57
VPS13B-210ENST00000521932 PHLPP1O60346 1717 aa11.51□□□□□ -0.57
VPS13B-210ENST00000521932 MYOM1P52179 1685 aa11.5□□□□□ -0.57
VPS13B-210ENST00000521932 CARD14Q9BXL6 1004 aa11.5□□□□□ -0.57
VPS13B-210ENST00000521932 PANK3Q9H999 370 aa11.5□□□□□ -0.57
VPS13B-210ENST00000521932 TTC21BQ7Z4L5 1316 aa11.5□□□□□ -0.57
VPS13B-210ENST00000521932 TTC21AQ8NDW8 1320 aa11.5□□□□□ -0.57
VPS13B-210ENST00000521932 EDC4Q6P2E9 1401 aaKnown RBP11.5□□□□□ -0.57
VPS13B-210ENST00000521932 AKAP12Q02952 1782 aa11.49□□□□□ -0.57
VPS13B-210ENST00000521932 PER1O15534 1290 aaPredicted RBP11.49□□□□□ -0.57
VPS13B-210ENST00000521932 MLLT3P42568 568 aaPredicted RBP11.49□□□□□ -0.57
VPS13B-210ENST00000521932 CDHR5Q9HBB8 845 aa11.49□□□□□ -0.57
VPS13B-210ENST00000521932 RABGEF1Q9UJ41 708 aa11.49□□□□□ -0.57
VPS13B-210ENST00000521932 TNS3Q68CZ2 1445 aa11.49□□□□□ -0.57
VPS13B-210ENST00000521932 TRPM3Q9HCF6 1732 aaPredicted RBP11.49□□□□□ -0.57
VPS13B-210ENST00000521932 ABTB2Q8N961 1025 aa11.48□□□□□ -0.57
VPS13B-210ENST00000521932 ARHGEF10O15013 1369 aa11.48□□□□□ -0.57
VPS13B-210ENST00000521932 JCADQ9P266 1359 aa11.48□□□□□ -0.57
VPS13B-210ENST00000521932 MON2Q7Z3U7 1717 aa11.47□□□□□ -0.57
VPS13B-210ENST00000521932 PNPLA6Q8IY17 1366 aa11.47□□□□□ -0.57
VPS13B-210ENST00000521932 MRPL50Q8N5N7 158 aaKnown RBP11.47□□□□□ -0.57
VPS13B-210ENST00000521932 KIAA1468Q9P260 1216 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms