RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 MEGF6O75095 1541 aa29.03■■■□□ 2.24
PABPC1-218ENST00000521865 SYT17Q9BSW7 474 aa29.02■■■□□ 2.24
PABPC1-218ENST00000521865 ARXQ96QS3 562 aa29.01■■■□□ 2.23
PABPC1-218ENST00000521865 KAT6BQ8WYB5 2073 aa29.01■■■□□ 2.23
PABPC1-218ENST00000521865 PAPPAQ13219 1627 aa29.01■■■□□ 2.23
PABPC1-218ENST00000521865 SGIP1Q9BQI5 828 aa29■■■□□ 2.23
PABPC1-218ENST00000521865 TATP17735 454 aaPredicted RBP28.99■■■□□ 2.23
PABPC1-218ENST00000521865 KCNQ4P56696 695 aa28.99■■■□□ 2.23
PABPC1-218ENST00000521865 HSP90AB2PQ58FF8 381 aa28.99■■■□□ 2.23
PABPC1-218ENST00000521865 AKT1S1Q96B36 256 aa28.99■■■□□ 2.23
PABPC1-218ENST00000521865 CGNL1Q0VF96 1302 aa28.98■■■□□ 2.23
PABPC1-218ENST00000521865 TFCP2L1Q9NZI6 479 aa28.98■■■□□ 2.23
PABPC1-218ENST00000521865 INSRP06213 1382 aa28.96■■■□□ 2.23
PABPC1-218ENST00000521865 FLT4P35916 1363 aa28.96■■■□□ 2.23
PABPC1-218ENST00000521865 PCGF6Q9BYE7 350 aa28.95■■■□□ 2.22
PABPC1-218ENST00000521865 TIMELESSQ9UNS1 1208 aa28.95■■■□□ 2.22
PABPC1-218ENST00000521865 NSD3Q9BZ95 1437 aa28.94■■■□□ 2.22
PABPC1-218ENST00000521865 CARD14Q9BXL6 1004 aa28.94■■■□□ 2.22
PABPC1-218ENST00000521865 CCNL1Q9UK58 526 aaPredicted RBP28.94■■■□□ 2.22
PABPC1-218ENST00000521865 NSD2O96028 1365 aa28.93■■■□□ 2.22
PABPC1-218ENST00000521865 POLD1P28340 1107 aa28.93■■■□□ 2.22
PABPC1-218ENST00000521865 KLHL34Q8N239 644 aa28.93■■■□□ 2.22
PABPC1-218ENST00000521865 SLC16A10Q8TF71 515 aa28.93■■■□□ 2.22
PABPC1-218ENST00000521865 RGPD2P0DJD1 1756 aa28.93■■■□□ 2.22
PABPC1-218ENST00000521865 PNPLA7Q6ZV29 1317 aa28.93■■■□□ 2.22
PABPC1-218ENST00000521865 DOT1LQ8TEK3 1739 aa28.92■■■□□ 2.22
PABPC1-218ENST00000521865 PPM1GO15355 546 aaPredicted RBP28.92■■■□□ 2.22
PABPC1-218ENST00000521865 KIF24Q5T7B8 1368 aa28.91■■■□□ 2.22
PABPC1-218ENST00000521865 POLR3GLQ9BT43 218 aa28.91■■■□□ 2.22
PABPC1-218ENST00000521865 EMILIN1Q9Y6C2 1016 aa28.91■■■□□ 2.22
PABPC1-218ENST00000521865 PCDH11XQ9BZA7 1347 aa28.91■■■□□ 2.22
PABPC1-218ENST00000521865 PCDH11YQ9BZA8 1340 aa28.91■■■□□ 2.22
PABPC1-218ENST00000521865 KIF20BQ96Q89 1820 aa28.88■■■□□ 2.21
PABPC1-218ENST00000521865 MSH5O43196 834 aa28.88■■■□□ 2.21
PABPC1-218ENST00000521865 SHANK3Q9BYB0 1731 aa28.86■■■□□ 2.21
PABPC1-218ENST00000521865 MPRIPQ6WCQ1 1025 aa28.84■■■□□ 2.21
PABPC1-218ENST00000521865 CLSPNQ9HAW4 1339 aa28.84■■■□□ 2.21
PABPC1-218ENST00000521865 MAP3K5Q99683 1374 aa28.84■■■□□ 2.21
PABPC1-218ENST00000521865 CYP27B1O15528 508 aa28.82■■■□□ 2.2
PABPC1-218ENST00000521865 GPR162Q16538 588 aa28.82■■■□□ 2.2
PABPC1-218ENST00000521865 PELP1Q8IZL8 1130 aaKnown RBP28.8■■■□□ 2.2
PABPC1-218ENST00000521865 PALLDQ8WX93 1383 aa28.79■■■□□ 2.2
PABPC1-218ENST00000521865 LY75O60449 1722 aa28.79■■■□□ 2.2
PABPC1-218ENST00000521865 COL23A1Q86Y22 540 aaPredicted RBP28.78■■■□□ 2.2
PABPC1-218ENST00000521865 SPG7Q9UQ90 795 aa28.78■■■□□ 2.2
PABPC1-218ENST00000521865 WASHC2AQ641Q2 1341 aa28.77■■■□□ 2.2
PABPC1-218ENST00000521865 HMGB2P26583 209 aaKnown RBP28.77■■■□□ 2.2
PABPC1-218ENST00000521865 QSER1Q2KHR3 1735 aa28.77■■■□□ 2.2
PABPC1-218ENST00000521865 UTRNP46939 3433 aa28.76■■■□□ 2.19
PABPC1-218ENST00000521865 TNNT2P45379 298 aaPredicted RBP28.76■■■□□ 2.19
PABPC1-218ENST00000521865 ZNF784Q8NCA9 323 aaPredicted RBP28.75■■■□□ 2.19
PABPC1-218ENST00000521865 SMARCC1Q92922 1105 aaPredicted RBP28.75■■■□□ 2.19
PABPC1-218ENST00000521865 MSL1Q68DK7 614 aa28.74■■■□□ 2.19
PABPC1-218ENST00000521865 EYA1Q99502 592 aa28.74■■■□□ 2.19
PABPC1-218ENST00000521865 POLKQ9UBT6 870 aa28.74■■■□□ 2.19
PABPC1-218ENST00000521865 EIF4G2P78344 907 aaKnown RBP eCLIP28.73■■■□□ 2.19
PABPC1-218ENST00000521865 FLAD1Q8NFF5 587 aa28.71■■■□□ 2.19
PABPC1-218ENST00000521865 NLGN2Q8NFZ4 835 aa28.71■■■□□ 2.19
PABPC1-218ENST00000521865 PIGBQ92521 554 aa28.71■■■□□ 2.19
PABPC1-218ENST00000521865 AK7Q96M32 723 aa28.71■■■□□ 2.19
PABPC1-218ENST00000521865 TUBGCP6Q96RT7 1819 aa28.71■■■□□ 2.19
PABPC1-218ENST00000521865 NCAPD2Q15021 1401 aa28.69■■■□□ 2.18
PABPC1-218ENST00000521865 HSPA5P11021 654 aaKnown RBP28.69■■■□□ 2.18
PABPC1-218ENST00000521865 NKX1-1Q15270 411 aaPredicted RBP28.69■■■□□ 2.18
PABPC1-218ENST00000521865 IFNL2Q8IZJ0 200 aa28.67■■■□□ 2.18
PABPC1-218ENST00000521865 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.67■■■□□ 2.18
PABPC1-218ENST00000521865 TMOD3Q9NYL9 352 aa28.67■■■□□ 2.18
PABPC1-218ENST00000521865 EIF4A2Q14240 407 aaKnown RBP28.66■■■□□ 2.18
PABPC1-218ENST00000521865 C5P01031 1676 aa28.65■■■□□ 2.18
PABPC1-218ENST00000521865 PHF14O94880 888 aa28.65■■■□□ 2.18
PABPC1-218ENST00000521865 CCER1Q8TC90 406 aaPredicted RBP28.65■■■□□ 2.18
PABPC1-218ENST00000521865 PANK3Q9H999 370 aa28.65■■■□□ 2.18
PABPC1-218ENST00000521865 PKD1L3Q7Z443 1732 aa28.65■■■□□ 2.18
PABPC1-218ENST00000521865 ANKRD26Q9UPS8 1709 aa28.63■■■□□ 2.17
PABPC1-218ENST00000521865 TOGARAM1Q9Y4F4 1720 aa28.63■■■□□ 2.17
PABPC1-218ENST00000521865 PHKG2P15735 406 aa28.63■■■□□ 2.17
PABPC1-218ENST00000521865 COL24A1Q17RW2 1714 aa28.63■■■□□ 2.17
PABPC1-218ENST00000521865 LOC102724428A0A0B4J2F2 783 aa28.61■■■□□ 2.17
PABPC1-218ENST00000521865 SIK1P57059 783 aa28.61■■■□□ 2.17
PABPC1-218ENST00000521865 ASAP1Q9ULH1 1129 aa28.6■■■□□ 2.17
PABPC1-218ENST00000521865 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.59■■■□□ 2.17
PABPC1-218ENST00000521865 MAP2P11137 1827 aaKnown RBP28.59■■■□□ 2.17
PABPC1-218ENST00000521865 GRIN3BO60391 1043 aa28.58■■■□□ 2.17
PABPC1-218ENST00000521865 SMIM5Q71RC9 77 aa28.58■■■□□ 2.17
PABPC1-218ENST00000521865 C4BP0C0L5 1744 aa28.57■■■□□ 2.16
PABPC1-218ENST00000521865 ATP6V1AP38606 617 aa28.57■■■□□ 2.16
PABPC1-218ENST00000521865 MORC1Q86VD1 984 aa28.57■■■□□ 2.16
PABPC1-218ENST00000521865 AMIGO3Q86WK7 504 aa28.57■■■□□ 2.16
PABPC1-218ENST00000521865 LINC00116Q8NCU8 138 aa28.57■■■□□ 2.16
PABPC1-218ENST00000521865 CD2APQ9Y5K6 639 aa28.57■■■□□ 2.16
PABPC1-218ENST00000521865 ITGB4P16144 1822 aa28.56■■■□□ 2.16
PABPC1-218ENST00000521865 YBX3P16989 372 aaKnown RBP eCLIP28.56■■■□□ 2.164e-27■■□□□ 11.7
PABPC1-218ENST00000521865 IGSF1Q8N6C5 1336 aa28.56■■■□□ 2.16
PABPC1-218ENST00000521865 CHD4Q14839 1912 aa28.55■■■□□ 2.16
PABPC1-218ENST00000521865 SSFA2P28290 1259 aa28.55■■■□□ 2.16
PABPC1-218ENST00000521865 GNPATO15228 680 aa28.54■■■□□ 2.16
PABPC1-218ENST00000521865 PLEKHO1Q53GL0 409 aaPredicted RBP28.54■■■□□ 2.16
PABPC1-218ENST00000521865 ATG3Q9NT62 314 aa28.54■■■□□ 2.16
PABPC1-218ENST00000521865 ITPK1Q13572 414 aa28.53■■■□□ 2.16
PABPC1-218ENST00000521865 TAF1LQ8IZX4 1826 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms