RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 UTRNP46939 3433 aa12.44□□□□□ -0.42
CTNNA1-229ENST00000521683 NSD2O96028 1365 aa12.43□□□□□ -0.42
CTNNA1-229ENST00000521683 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
CTNNA1-229ENST00000521683 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
CTNNA1-229ENST00000521683 FBLN1P23142 703 aa12.43□□□□□ -0.42
CTNNA1-229ENST00000521683 RRS1Q15050 365 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-229ENST00000521683 ZNF827Q17R98 1081 aa12.43□□□□□ -0.42
CTNNA1-229ENST00000521683 ZCRB1Q8TBF4 217 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-229ENST00000521683 AKT1S1Q96B36 256 aa12.43□□□□□ -0.42
CTNNA1-229ENST00000521683 GGNBP2Q9H3C7 697 aa12.43□□□□□ -0.42
CTNNA1-229ENST00000521683 TIMELESSQ9UNS1 1208 aa12.43□□□□□ -0.42
CTNNA1-229ENST00000521683 INSRP06213 1382 aa12.43□□□□□ -0.42
CTNNA1-229ENST00000521683 FLT4P35916 1363 aa12.43□□□□□ -0.42
CTNNA1-229ENST00000521683 LY75O60449 1722 aa12.42□□□□□ -0.42
CTNNA1-229ENST00000521683 PRIM1P49642 420 aaKnown RBP12.41□□□□□ -0.42
CTNNA1-229ENST00000521683 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
CTNNA1-229ENST00000521683 SLC16A10Q8TF71 515 aa12.41□□□□□ -0.42
CTNNA1-229ENST00000521683 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
CTNNA1-229ENST00000521683 SYT17Q9BSW7 474 aa12.41□□□□□ -0.42
CTNNA1-229ENST00000521683 FHDC1Q9C0D6 1143 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-229ENST00000521683 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
CTNNA1-229ENST00000521683 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.42
CTNNA1-229ENST00000521683 RAPGEF4Q8WZA2 1011 aa12.4□□□□□ -0.42
CTNNA1-229ENST00000521683 SYTL4Q96C24 671 aaPredicted RBP12.4□□□□□ -0.42
CTNNA1-229ENST00000521683 ARXQ96QS3 562 aa12.4□□□□□ -0.42
CTNNA1-229ENST00000521683 NSD3Q9BZ95 1437 aa12.39□□□□□ -0.43
CTNNA1-229ENST00000521683 TATP17735 454 aaPredicted RBP12.39□□□□□ -0.43
CTNNA1-229ENST00000521683 TUBGCP6Q96RT7 1819 aa12.39□□□□□ -0.43
CTNNA1-229ENST00000521683 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
CTNNA1-229ENST00000521683 PCDH11XQ9BZA7 1347 aa12.38□□□□□ -0.43
CTNNA1-229ENST00000521683 PCDH11YQ9BZA8 1340 aa12.38□□□□□ -0.43
CTNNA1-229ENST00000521683 NCAPD2Q15021 1401 aa12.38□□□□□ -0.43
CTNNA1-229ENST00000521683 ANKRD26Q9UPS8 1709 aa12.38□□□□□ -0.43
CTNNA1-229ENST00000521683 USHBP1Q8N6Y0 703 aa12.38□□□□□ -0.43
CTNNA1-229ENST00000521683 HSP90AB2PQ58FF8 381 aa12.37□□□□□ -0.43
CTNNA1-229ENST00000521683 CARD14Q9BXL6 1004 aa12.37□□□□□ -0.43
CTNNA1-229ENST00000521683 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-229ENST00000521683 PKD1L3Q7Z443 1732 aa12.37□□□□□ -0.43
CTNNA1-229ENST00000521683 HMGB2P26583 209 aaKnown RBP12.36□□□□□ -0.43
CTNNA1-229ENST00000521683 POLD1P28340 1107 aa12.36□□□□□ -0.43
CTNNA1-229ENST00000521683 TFCP2L1Q9NZI6 479 aa12.36□□□□□ -0.43
CTNNA1-229ENST00000521683 EMILIN1Q9Y6C2 1016 aa12.35□□□□□ -0.43
CTNNA1-229ENST00000521683 KCNQ4P56696 695 aa12.34□□□□□ -0.43
CTNNA1-229ENST00000521683 CHD4Q14839 1912 aa12.34□□□□□ -0.43
CTNNA1-229ENST00000521683 C5P01031 1676 aa12.34□□□□□ -0.43
CTNNA1-229ENST00000521683 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
CTNNA1-229ENST00000521683 CYP27B1O15528 508 aa12.33□□□□□ -0.44
CTNNA1-229ENST00000521683 TOGARAM1Q9Y4F4 1720 aa12.33□□□□□ -0.44
CTNNA1-229ENST00000521683 WASHC2AQ641Q2 1341 aa12.33□□□□□ -0.44
CTNNA1-229ENST00000521683 PLEKHG2Q9H7P9 1386 aa12.32□□□□□ -0.44
CTNNA1-229ENST00000521683 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-229ENST00000521683 ZNF784Q8NCA9 323 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-229ENST00000521683 SMARCC1Q92922 1105 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-229ENST00000521683 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.441e-8■■□□□ 12.3
CTNNA1-229ENST00000521683 TAF1LQ8IZX4 1826 aa12.31□□□□□ -0.44
CTNNA1-229ENST00000521683 MAP2P11137 1827 aaKnown RBP12.3□□□□□ -0.44
CTNNA1-229ENST00000521683 ITGB4P16144 1822 aa12.3□□□□□ -0.44
CTNNA1-229ENST00000521683 GOLGB1Q14789 3259 aaKnown RBP12.3□□□□□ -0.44
CTNNA1-229ENST00000521683 COL23A1Q86Y22 540 aaPredicted RBP12.3□□□□□ -0.44
CTNNA1-229ENST00000521683 FLAD1Q8NFF5 587 aa12.3□□□□□ -0.44
CTNNA1-229ENST00000521683 SPG7Q9UQ90 795 aa12.3□□□□□ -0.44
CTNNA1-229ENST00000521683 PPM1GO15355 546 aaPredicted RBP12.29□□□□□ -0.44
CTNNA1-229ENST00000521683 GPR162Q16538 588 aa12.29□□□□□ -0.44
CTNNA1-229ENST00000521683 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
CTNNA1-229ENST00000521683 EYA1Q99502 592 aa12.29□□□□□ -0.44
CTNNA1-229ENST00000521683 POLKQ9UBT6 870 aa12.29□□□□□ -0.44
CTNNA1-229ENST00000521683 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
CTNNA1-229ENST00000521683 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
CTNNA1-229ENST00000521683 MSH5O43196 834 aa12.27□□□□□ -0.45
CTNNA1-229ENST00000521683 EIF4G2P78344 907 aaKnown RBP eCLIP12.27□□□□□ -0.45
CTNNA1-229ENST00000521683 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
CTNNA1-229ENST00000521683 PIGBQ92521 554 aa12.27□□□□□ -0.45
CTNNA1-229ENST00000521683 UBR3Q6ZT12 1888 aa12.26□□□□□ -0.45
CTNNA1-229ENST00000521683 EIF4A2Q14240 407 aaKnown RBP12.26□□□□□ -0.45
CTNNA1-229ENST00000521683 AK7Q96M32 723 aa12.26□□□□□ -0.45
CTNNA1-229ENST00000521683 PCGF6Q9BYE7 350 aa12.26□□□□□ -0.45
CTNNA1-229ENST00000521683 PHKG2P15735 406 aa12.25□□□□□ -0.45
CTNNA1-229ENST00000521683 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
CTNNA1-229ENST00000521683 IFNL2Q8IZJ0 200 aa12.25□□□□□ -0.45
CTNNA1-229ENST00000521683 TMOD3Q9NYL9 352 aa12.25□□□□□ -0.45
CTNNA1-229ENST00000521683 IGSF1Q8N6C5 1336 aa12.25□□□□□ -0.45
CTNNA1-229ENST00000521683 LOC102724428A0A0B4J2F2 783 aa12.24□□□□□ -0.45
CTNNA1-229ENST00000521683 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
CTNNA1-229ENST00000521683 HSPA5P11021 654 aaKnown RBP12.24□□□□□ -0.45
CTNNA1-229ENST00000521683 SSFA2P28290 1259 aa12.24□□□□□ -0.45
CTNNA1-229ENST00000521683 SIK1P57059 783 aa12.24□□□□□ -0.45
CTNNA1-229ENST00000521683 POLR3GLQ9BT43 218 aa12.24□□□□□ -0.45
CTNNA1-229ENST00000521683 CD2APQ9Y5K6 639 aa12.24□□□□□ -0.45
CTNNA1-229ENST00000521683 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
CTNNA1-229ENST00000521683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
CTNNA1-229ENST00000521683 YBX3P16989 372 aaKnown RBP eCLIP12.22□□□□□ -0.45
CTNNA1-229ENST00000521683 TNNT2P45379 298 aaPredicted RBP12.22□□□□□ -0.45
CTNNA1-229ENST00000521683 LINC00116Q8NCU8 138 aa12.22□□□□□ -0.45
CTNNA1-229ENST00000521683 PANK3Q9H999 370 aa12.22□□□□□ -0.45
CTNNA1-229ENST00000521683 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
CTNNA1-229ENST00000521683 KDRP35968 1356 aa12.21□□□□□ -0.45
CTNNA1-229ENST00000521683 HSP90AB1P08238 724 aaKnown RBP12.21□□□□□ -0.45
CTNNA1-229ENST00000521683 AMIGO3Q86WK7 504 aa12.21□□□□□ -0.45
CTNNA1-229ENST00000521683 ASAP1Q9ULH1 1129 aa12.21□□□□□ -0.45
CTNNA1-229ENST00000521683 ERVV-2B6SEH9 535 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms