RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 ADCY9O60503 1353 aa15.07■□□□□ 0
MRPS28-208ENST00000521605 NFAT5O94916 1531 aa15.07■□□□□ 0
MRPS28-208ENST00000521605 DDX54Q8TDD1 881 aaKnown RBP15.06■□□□□ 0
MRPS28-208ENST00000521605 KIAA1210Q9ULL0 1709 aa15.04■□□□□ -0
MRPS28-208ENST00000521605 ERBB3P21860 1342 aa15.04■□□□□ -0
MRPS28-208ENST00000521605 COL23A1Q86Y22 540 aaPredicted RBP15.04■□□□□ -0
MRPS28-208ENST00000521605 KIF3CO14782 793 aa15.02■□□□□ -0
MRPS28-208ENST00000521605 PRIM1P49642 420 aaKnown RBP15.02■□□□□ -0
MRPS28-208ENST00000521605 APLP1P51693 650 aa15.02■□□□□ -0
MRPS28-208ENST00000521605 ANKRD24Q8TF21 1146 aa15.02■□□□□ -0
MRPS28-208ENST00000521605 CCNL1Q9UK58 526 aaPredicted RBP15.02■□□□□ -0
MRPS28-208ENST00000521605 TTC21AQ8NDW8 1320 aa15.01□□□□□ -0.01
MRPS28-208ENST00000521605 HSPA5P11021 654 aaKnown RBP15.01□□□□□ -0.01
MRPS28-208ENST00000521605 DOT1LQ8TEK3 1739 aa15□□□□□ -0.01
MRPS28-208ENST00000521605 ZNF692Q9BU19 519 aaPredicted RBP15□□□□□ -0.01
MRPS28-208ENST00000521605 CD2APQ9Y5K6 639 aa15□□□□□ -0.01
MRPS28-208ENST00000521605 LY75O60449 1722 aa15□□□□□ -0.01
MRPS28-208ENST00000521605 EVC2Q86UK5 1308 aa14.99□□□□□ -0.01
MRPS28-208ENST00000521605 LTN1O94822 1766 aa14.99□□□□□ -0.01
MRPS28-208ENST00000521605 COL13A1Q5TAT6 717 aaPredicted RBP14.99□□□□□ -0.01
MRPS28-208ENST00000521605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.99□□□□□ -0.017e-7■■□□□ 13.8
MRPS28-208ENST00000521605 KTN1Q86UP2 1357 aaKnown RBP14.98□□□□□ -0.01
MRPS28-208ENST00000521605 DNAJC5GQ8N7S2 189 aa14.98□□□□□ -0.01
MRPS28-208ENST00000521605 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
MRPS28-208ENST00000521605 USP47Q96K76 1375 aa14.98□□□□□ -0.01
MRPS28-208ENST00000521605 IGSF1Q8N6C5 1336 aa14.97□□□□□ -0.01
MRPS28-208ENST00000521605 LTV1Q96GA3 475 aaPredicted RBP14.97□□□□□ -0.01
MRPS28-208ENST00000521605 NSD2O96028 1365 aa14.97□□□□□ -0.01
MRPS28-208ENST00000521605 MIER1Q8N108 512 aa14.96□□□□□ -0.01
MRPS28-208ENST00000521605 NME9Q86XW9 330 aa14.95□□□□□ -0.02
MRPS28-208ENST00000521605 HTRA3P83110 453 aa14.94□□□□□ -0.02
MRPS28-208ENST00000521605 WASHC2AQ641Q2 1341 aa14.93□□□□□ -0.02
MRPS28-208ENST00000521605 TOMM70O94826 608 aa14.93□□□□□ -0.02
MRPS28-208ENST00000521605 TNS4Q8IZW8 715 aa14.93□□□□□ -0.02
MRPS28-208ENST00000521605 ROCK2O75116 1388 aaKnown RBP14.93□□□□□ -0.02
MRPS28-208ENST00000521605 C5P01031 1676 aa14.93□□□□□ -0.02
MRPS28-208ENST00000521605 MON2Q7Z3U7 1717 aa14.92□□□□□ -0.02
MRPS28-208ENST00000521605 WDR90Q96KV7 1748 aa14.92□□□□□ -0.02
MRPS28-208ENST00000521605 CARD11Q9BXL7 1154 aa14.92□□□□□ -0.02
MRPS28-208ENST00000521605 USP31Q70CQ4 1352 aa14.91□□□□□ -0.02
MRPS28-208ENST00000521605 CCER2I3L3R5 266 aa14.9□□□□□ -0.02
MRPS28-208ENST00000521605 PHF14O94880 888 aa14.9□□□□□ -0.02
MRPS28-208ENST00000521605 DDX10Q13206 875 aaKnown RBP14.9□□□□□ -0.02
MRPS28-208ENST00000521605 SMIM5Q71RC9 77 aa14.9□□□□□ -0.02
MRPS28-208ENST00000521605 NMRK2Q9NPI5 230 aa14.9□□□□□ -0.02
MRPS28-208ENST00000521605 SLC24A1O60721 1099 aa14.89□□□□□ -0.03
MRPS28-208ENST00000521605 PRELPP51888 382 aa14.89□□□□□ -0.03
MRPS28-208ENST00000521605 FLAD1Q8NFF5 587 aa14.89□□□□□ -0.03
MRPS28-208ENST00000521605 ZCRB1Q8TBF4 217 aaKnown RBP14.89□□□□□ -0.03
MRPS28-208ENST00000521605 KLRG1Q96E93 195 aa14.89□□□□□ -0.03
MRPS28-208ENST00000521605 USP54Q70EL1 1684 aa14.89□□□□□ -0.03
MRPS28-208ENST00000521605 FAM208AQ9UK61 1670 aaKnown RBP14.87□□□□□ -0.03
MRPS28-208ENST00000521605 AMIGO3Q86WK7 504 aa14.87□□□□□ -0.03
MRPS28-208ENST00000521605 AK7Q96M32 723 aa14.87□□□□□ -0.03
MRPS28-208ENST00000521605 MEGF6O75095 1541 aa14.87□□□□□ -0.03
MRPS28-208ENST00000521605 SBNO2Q9Y2G9 1366 aa14.86□□□□□ -0.03
MRPS28-208ENST00000521605 CICQ96RK0 1608 aaPredicted RBP14.86□□□□□ -0.03
MRPS28-208ENST00000521605 IP6K1Q92551 441 aa14.86□□□□□ -0.03
MRPS28-208ENST00000521605 KIF7Q2M1P5 1343 aa14.86□□□□□ -0.03
MRPS28-208ENST00000521605 PALLDQ8WX93 1383 aa14.85□□□□□ -0.03
MRPS28-208ENST00000521605 C16orf71Q8IYS4 520 aaPredicted RBP14.85□□□□□ -0.03
MRPS28-208ENST00000521605 JMYQ8N9B5 988 aa14.85□□□□□ -0.03
MRPS28-208ENST00000521605 TMC1Q8TDI8 760 aa14.85□□□□□ -0.03
MRPS28-208ENST00000521605 C4BP0C0L5 1744 aa14.85□□□□□ -0.03
MRPS28-208ENST00000521605 RGPD2P0DJD1 1756 aa14.85□□□□□ -0.03
MRPS28-208ENST00000521605 TAF1LQ8IZX4 1826 aa14.85□□□□□ -0.03
MRPS28-208ENST00000521605 PCNTO95613 3336 aa14.84□□□□□ -0.03
MRPS28-208ENST00000521605 TOGARAM1Q9Y4F4 1720 aa14.84□□□□□ -0.03
MRPS28-208ENST00000521605 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.84□□□□□ -0.03
MRPS28-208ENST00000521605 ANP32CO43423 234 aa14.84□□□□□ -0.03
MRPS28-208ENST00000521605 CENPBP07199 599 aaPredicted RBP14.84□□□□□ -0.03
MRPS28-208ENST00000521605 MPRIPQ6WCQ1 1025 aa14.84□□□□□ -0.03
MRPS28-208ENST00000521605 BCS1LQ9Y276 419 aa14.84□□□□□ -0.03
MRPS28-208ENST00000521605 CD163L1Q9NR16 1453 aa14.83□□□□□ -0.03
MRPS28-208ENST00000521605 ARHGAP27Q6ZUM4 889 aa14.83□□□□□ -0.04
MRPS28-208ENST00000521605 RBM46Q8TBY0 533 aaKnown RBP14.83□□□□□ -0.04
MRPS28-208ENST00000521605 HDGFL2Q7Z4V5 671 aaPredicted RBP14.82□□□□□ -0.04
MRPS28-208ENST00000521605 USHBP1Q8N6Y0 703 aa14.82□□□□□ -0.04
MRPS28-208ENST00000521605 PXDNLA1KZ92 1463 aa14.81□□□□□ -0.04
MRPS28-208ENST00000521605 N4BP2Q86UW6 1770 aaPredicted RBP14.8□□□□□ -0.04
MRPS28-208ENST00000521605 UBR3Q6ZT12 1888 aa14.8□□□□□ -0.04
MRPS28-208ENST00000521605 ST20-MTHFSA0A0A6YYL1 179 aa14.8□□□□□ -0.04
MRPS28-208ENST00000521605 FBLN1P23142 703 aa14.8□□□□□ -0.04
MRPS28-208ENST00000521605 HOXC9P31274 260 aa14.8□□□□□ -0.04
MRPS28-208ENST00000521605 AMPHP49418 695 aa14.8□□□□□ -0.04
MRPS28-208ENST00000521605 A0A0G2JLW4 131 aa14.79□□□□□ -0.04
MRPS28-208ENST00000521605 HMGB2P26583 209 aaKnown RBP14.79□□□□□ -0.04
MRPS28-208ENST00000521605 MAP3K19Q56UN5 1328 aa14.79□□□□□ -0.04
MRPS28-208ENST00000521605 EDC4Q6P2E9 1401 aaKnown RBP14.79□□□□□ -0.04
MRPS28-208ENST00000521605 SLC12A5Q9H2X9 1139 aa14.79□□□□□ -0.04
MRPS28-208ENST00000521605 MMP10P09238 476 aa14.78□□□□□ -0.04
MRPS28-208ENST00000521605 FSTL1Q12841 308 aa14.78□□□□□ -0.04
MRPS28-208ENST00000521605 NBPF6Q5VWK0 638 aa14.78□□□□□ -0.04
MRPS28-208ENST00000521605 RAPGEF4Q8WZA2 1011 aa14.78□□□□□ -0.04
MRPS28-208ENST00000521605 NBPF4Q96M43 638 aa14.78□□□□□ -0.04
MRPS28-208ENST00000521605 TESK2Q96S53 571 aa14.78□□□□□ -0.04
MRPS28-208ENST00000521605 KCPQ6ZWJ8 1503 aa14.77□□□□□ -0.04
MRPS28-208ENST00000521605 NSD3Q9BZ95 1437 aa14.77□□□□□ -0.04
MRPS28-208ENST00000521605 A0A1W2PP64 1363 aa14.77□□□□□ -0.04
MRPS28-208ENST00000521605 FCHSD2O94868 740 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms