RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 MYT1Q01538 1121 aa29.08■■■□□ 2.25
PTP4A3-204ENST00000521578 KDRP35968 1356 aa29.08■■■□□ 2.25
PTP4A3-204ENST00000521578 MEGF6O75095 1541 aa29.07■■■□□ 2.24
PTP4A3-204ENST00000521578 ADAMTS8Q9UP79 889 aa29.06■■■□□ 2.24
PTP4A3-204ENST00000521578 DISP2A7MBM2 1401 aa29.06■■■□□ 2.24
PTP4A3-204ENST00000521578 WNK3Q9BYP7 1800 aa29.06■■■□□ 2.24
PTP4A3-204ENST00000521578 TATP17735 454 aaPredicted RBP29.06■■■□□ 2.24
PTP4A3-204ENST00000521578 RSPH6AQ9H0K4 717 aa29.05■■■□□ 2.24
PTP4A3-204ENST00000521578 FCHSD2O94868 740 aa29.03■■■□□ 2.24
PTP4A3-204ENST00000521578 PRKAR2BP31323 418 aa29.03■■■□□ 2.24
PTP4A3-204ENST00000521578 CDCA7Q9BWT1 371 aaPredicted RBP29.03■■■□□ 2.24
PTP4A3-204ENST00000521578 ONECUT3O60422 494 aaPredicted RBP29.03■■■□□ 2.24
PTP4A3-204ENST00000521578 RNF123Q5XPI4 1314 aa29.02■■■□□ 2.24
PTP4A3-204ENST00000521578 SEPT12Q8IYM1 358 aa29.02■■■□□ 2.24
PTP4A3-204ENST00000521578 PDE3BQ13370 1112 aa29.01■■■□□ 2.23
PTP4A3-204ENST00000521578 PARP4Q9UKK3 1724 aaKnown RBP29■■■□□ 2.23
PTP4A3-204ENST00000521578 THSD7AQ9UPZ6 1657 aa29■■■□□ 2.23
PTP4A3-204ENST00000521578 OVOS2A0A0G2JMS6 1433 aa29■■■□□ 2.23
PTP4A3-204ENST00000521578 DDB1Q16531 1140 aa28.99■■■□□ 2.23
PTP4A3-204ENST00000521578 IRX6P78412 446 aaPredicted RBP28.98■■■□□ 2.23
PTP4A3-204ENST00000521578 EXOC5O00471 708 aa28.97■■■□□ 2.23
PTP4A3-204ENST00000521578 CCDC146Q8IYE0 955 aa28.97■■■□□ 2.23
PTP4A3-204ENST00000521578 ZCRB1Q8TBF4 217 aaKnown RBP28.97■■■□□ 2.23
PTP4A3-204ENST00000521578 PHACTR3Q96KR7 559 aa28.97■■■□□ 2.23
PTP4A3-204ENST00000521578 LRRC37A3O60309 1634 aa28.96■■■□□ 2.23
PTP4A3-204ENST00000521578 RGS12O14924 1447 aa28.96■■■□□ 2.23
PTP4A3-204ENST00000521578 PLEKHF1Q96S99 279 aa28.95■■■□□ 2.23
PTP4A3-204ENST00000521578 PNNQ9H307 717 aaKnown RBP28.94■■■□□ 2.22
PTP4A3-204ENST00000521578 PLEKHO1Q53GL0 409 aaPredicted RBP28.94■■■□□ 2.22
PTP4A3-204ENST00000521578 PPP4R2Q9NY27 417 aa28.94■■■□□ 2.22
PTP4A3-204ENST00000521578 SPG7Q9UQ90 795 aa28.94■■■□□ 2.22
PTP4A3-204ENST00000521578 TNS2Q63HR2 1409 aa28.93■■■□□ 2.22
PTP4A3-204ENST00000521578 DDX54Q8TDD1 881 aaKnown RBP28.93■■■□□ 2.22
PTP4A3-204ENST00000521578 NEFMP07197 916 aa28.92■■■□□ 2.22
PTP4A3-204ENST00000521578 AMOTQ4VCS5 1084 aa28.92■■■□□ 2.22
PTP4A3-204ENST00000521578 BRWD3Q6RI45 1802 aa28.92■■■□□ 2.22
PTP4A3-204ENST00000521578 PKD1L3Q7Z443 1732 aa28.92■■■□□ 2.22
PTP4A3-204ENST00000521578 MTHFSDQ2M296 383 aaKnown RBP28.91■■■□□ 2.22
PTP4A3-204ENST00000521578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.91■■■□□ 2.22
PTP4A3-204ENST00000521578 MAPK8IP3Q9UPT6 1336 aa28.91■■■□□ 2.22
PTP4A3-204ENST00000521578 SENP3-EIF4A1A0A087X0R7 540 aa28.91■■■□□ 2.22
PTP4A3-204ENST00000521578 RUNDC1Q96C34 613 aa28.9■■■□□ 2.22
PTP4A3-204ENST00000521578 SHANK3Q9BYB0 1731 aa28.89■■■□□ 2.22
PTP4A3-204ENST00000521578 ZNF530Q6P9A1 599 aaPredicted RBP28.89■■■□□ 2.22
PTP4A3-204ENST00000521578 PLEKHG2Q9H7P9 1386 aa28.89■■■□□ 2.22
PTP4A3-204ENST00000521578 PCDH11XQ9BZA7 1347 aa28.88■■■□□ 2.21
PTP4A3-204ENST00000521578 PCDH11YQ9BZA8 1340 aa28.88■■■□□ 2.21
PTP4A3-204ENST00000521578 CYP27B1O15528 508 aa28.88■■■□□ 2.21
PTP4A3-204ENST00000521578 FAM182BQ5T319 152 aa28.87■■■□□ 2.21
PTP4A3-204ENST00000521578 KRT27Q7Z3Y8 459 aa28.87■■■□□ 2.21
PTP4A3-204ENST00000521578 MARCH10Q8NA82 808 aaPredicted RBP28.87■■■□□ 2.21
PTP4A3-204ENST00000521578 TSHZ2Q9NRE2 1034 aa28.86■■■□□ 2.21
PTP4A3-204ENST00000521578 GAS2L2Q8NHY3 880 aa28.85■■■□□ 2.21
PTP4A3-204ENST00000521578 PHKG2P15735 406 aa28.84■■■□□ 2.21
PTP4A3-204ENST00000521578 IFNL2Q8IZJ0 200 aa28.84■■■□□ 2.21
PTP4A3-204ENST00000521578 C1orf141Q5JVX7 400 aa28.83■■■□□ 2.21
PTP4A3-204ENST00000521578 APAF1O14727 1248 aa28.83■■■□□ 2.21
PTP4A3-204ENST00000521578 RRP7AQ9Y3A4 280 aaKnown RBP28.83■■■□□ 2.21
PTP4A3-204ENST00000521578 EP400Q96L91 3159 aa28.82■■■□□ 2.2
PTP4A3-204ENST00000521578 NEUROD2Q15784 382 aa28.81■■■□□ 2.2
PTP4A3-204ENST00000521578 NFE2L2Q16236 605 aa28.81■■■□□ 2.2
PTP4A3-204ENST00000521578 SALL2Q9Y467 1007 aaPredicted RBP28.81■■■□□ 2.2
PTP4A3-204ENST00000521578 AKAP4Q5JQC9 854 aa28.8■■■□□ 2.2
PTP4A3-204ENST00000521578 TMPOP42166 694 aaKnown RBP28.8■■■□□ 2.2
PTP4A3-204ENST00000521578 MPRIPQ6WCQ1 1025 aa28.78■■■□□ 2.2
PTP4A3-204ENST00000521578 GNAT3A8MTJ3 354 aa28.77■■■□□ 2.2
PTP4A3-204ENST00000521578 KAT6BQ8WYB5 2073 aa28.77■■■□□ 2.2
PTP4A3-204ENST00000521578 RIPK4P57078 832 aa28.77■■■□□ 2.2
PTP4A3-204ENST00000521578 DLG5Q8TDM6 1919 aa28.77■■■□□ 2.2
PTP4A3-204ENST00000521578 MAP3K5Q99683 1374 aa28.77■■■□□ 2.2
PTP4A3-204ENST00000521578 CDCA7LQ96GN5 454 aa28.75■■■□□ 2.19
PTP4A3-204ENST00000521578 RCAN3Q9UKA8 241 aa28.75■■■□□ 2.19
PTP4A3-204ENST00000521578 NKX1-1Q15270 411 aaPredicted RBP28.74■■■□□ 2.19
PTP4A3-204ENST00000521578 HSP90AB1P08238 724 aaKnown RBP28.74■■■□□ 2.19
PTP4A3-204ENST00000521578 LGR6Q9HBX8 967 aa28.73■■■□□ 2.19
PTP4A3-204ENST00000521578 ZNF521Q96K83 1311 aa28.73■■■□□ 2.19
PTP4A3-204ENST00000521578 RTF1Q92541 710 aaKnown RBP28.72■■■□□ 2.19
PTP4A3-204ENST00000521578 ACSBG1Q96GR2 724 aa28.72■■■□□ 2.19
PTP4A3-204ENST00000521578 DCAF5Q96JK2 942 aa28.72■■■□□ 2.19
PTP4A3-204ENST00000521578 KDM6AO15550 1401 aaPredicted RBP28.72■■■□□ 2.19
PTP4A3-204ENST00000521578 DCTN1Q14203 1278 aa28.72■■■□□ 2.19
PTP4A3-204ENST00000521578 FAM196AQ6ZSG2 479 aa28.72■■■□□ 2.19
PTP4A3-204ENST00000521578 NGEFQ8N5V2 710 aa28.72■■■□□ 2.19
PTP4A3-204ENST00000521578 MCM10Q7L590 875 aa28.71■■■□□ 2.19
PTP4A3-204ENST00000521578 IL17REQ8NFR9 667 aa28.7■■■□□ 2.19
PTP4A3-204ENST00000521578 RNMTO43148 476 aaKnown RBP28.69■■■□□ 2.18
PTP4A3-204ENST00000521578 RRP1P56182 461 aaKnown RBP28.69■■■□□ 2.18
PTP4A3-204ENST00000521578 ILDR2Q71H61 639 aa28.69■■■□□ 2.18
PTP4A3-204ENST00000521578 VIRMAQ69YN4 1812 aaKnown RBP28.69■■■□□ 2.18
PTP4A3-204ENST00000521578 DOT1LQ8TEK3 1739 aa28.68■■■□□ 2.18
PTP4A3-204ENST00000521578 TOGARAM1Q9Y4F4 1720 aa28.68■■■□□ 2.18
PTP4A3-204ENST00000521578 HTATSF1O43719 755 aaKnown RBP28.68■■■□□ 2.18
PTP4A3-204ENST00000521578 SYTL4Q96C24 671 aaPredicted RBP28.68■■■□□ 2.18
PTP4A3-204ENST00000521578 TRIM35Q9UPQ4 493 aa28.68■■■□□ 2.18
PTP4A3-204ENST00000521578 SCN11AQ9UI33 1791 aa28.68■■■□□ 2.18
PTP4A3-204ENST00000521578 PRIM1P49642 420 aaKnown RBP28.67■■■□□ 2.18
PTP4A3-204ENST00000521578 THUMPD2Q9BTF0 503 aaKnown RBP28.67■■■□□ 2.18
PTP4A3-204ENST00000521578 BCL9O00512 1426 aa28.67■■■□□ 2.18
PTP4A3-204ENST00000521578 KCNQ2O43526 872 aa28.66■■■□□ 2.18
PTP4A3-204ENST00000521578 LMOD3Q0VAK6 560 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms