RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 FLAD1Q8NFF5 587 aa11.36□□□□□ -0.59
HMBOX1-208ENST00000521516 KAT6BQ8WYB5 2073 aa11.35□□□□□ -0.59
HMBOX1-208ENST00000521516 CCNL1Q9UK58 526 aaPredicted RBP11.35□□□□□ -0.59
HMBOX1-208ENST00000521516 MLLT1Q03111 559 aaPredicted RBP11.35□□□□□ -0.59
HMBOX1-208ENST00000521516 KDM2BQ8NHM5 1336 aa11.34□□□□□ -0.59
HMBOX1-208ENST00000521516 USP54Q70EL1 1684 aa11.34□□□□□ -0.59
HMBOX1-208ENST00000521516 KCPQ6ZWJ8 1503 aa11.34□□□□□ -0.59
HMBOX1-208ENST00000521516 ANKRD36BQ8N2N9 1353 aa11.34□□□□□ -0.59
HMBOX1-208ENST00000521516 FOXN1O15353 648 aa11.33□□□□□ -0.59
HMBOX1-208ENST00000521516 KCNH5Q8NCM2 988 aa11.33□□□□□ -0.59
HMBOX1-208ENST00000521516 ABHD8Q96I13 439 aa11.33□□□□□ -0.6
HMBOX1-208ENST00000521516 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
HMBOX1-208ENST00000521516 RRAGCQ9HB90 399 aa11.32□□□□□ -0.6
HMBOX1-208ENST00000521516 KIAA1551Q9HCM1 1747 aa11.32□□□□□ -0.6
HMBOX1-208ENST00000521516 NFAT5O94916 1531 aa11.32□□□□□ -0.6
HMBOX1-208ENST00000521516 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
HMBOX1-208ENST00000521516 C9orf131Q5VYM1 1079 aa11.32□□□□□ -0.6
HMBOX1-208ENST00000521516 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
HMBOX1-208ENST00000521516 ERBB3P21860 1342 aa11.31□□□□□ -0.6
HMBOX1-208ENST00000521516 PKD1L3Q7Z443 1732 aa11.31□□□□□ -0.6
HMBOX1-208ENST00000521516 MPHOSPH9Q99550 1183 aa11.3□□□□□ -0.6
HMBOX1-208ENST00000521516 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
HMBOX1-208ENST00000521516 C5P01031 1676 aa11.3□□□□□ -0.6
HMBOX1-208ENST00000521516 HMGB2P26583 209 aaKnown RBP11.29□□□□□ -0.6
HMBOX1-208ENST00000521516 CTCFP49711 727 aaPredicted RBP11.29□□□□□ -0.6
HMBOX1-208ENST00000521516 NLRP2Q9NX02 1062 aa11.29□□□□□ -0.6
HMBOX1-208ENST00000521516 BCS1LQ9Y276 419 aa11.29□□□□□ -0.6
HMBOX1-208ENST00000521516 TGFB2P61812 414 aa11.29□□□□□ -0.6
HMBOX1-208ENST00000521516 DOT1LQ8TEK3 1739 aa11.28□□□□□ -0.6
HMBOX1-208ENST00000521516 SYTL4Q96C24 671 aaPredicted RBP11.28□□□□□ -0.6
HMBOX1-208ENST00000521516 TOGARAM1Q9Y4F4 1720 aa11.28□□□□□ -0.6
HMBOX1-208ENST00000521516 DDX54Q8TDD1 881 aaKnown RBP11.28□□□□□ -0.6
HMBOX1-208ENST00000521516 AMIGO3Q86WK7 504 aa11.27□□□□□ -0.61
HMBOX1-208ENST00000521516 USP47Q96K76 1375 aa11.26□□□□□ -0.61
HMBOX1-208ENST00000521516 TAF1LQ8IZX4 1826 aa11.25□□□□□ -0.61
HMBOX1-208ENST00000521516 TNRC18O15417 2968 aaPredicted RBP11.25□□□□□ -0.61
HMBOX1-208ENST00000521516 N4BP2Q86UW6 1770 aaPredicted RBP11.25□□□□□ -0.61
HMBOX1-208ENST00000521516 A0A0G2JLW4 131 aa11.25□□□□□ -0.61
HMBOX1-208ENST00000521516 SOX12O15370 315 aa11.25□□□□□ -0.61
HMBOX1-208ENST00000521516 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
HMBOX1-208ENST00000521516 CABP1Q9NZU7 370 aa11.25□□□□□ -0.61
HMBOX1-208ENST00000521516 NSD3Q9BZ95 1437 aa11.24□□□□□ -0.61
HMBOX1-208ENST00000521516 TTC21BQ7Z4L5 1316 aa11.24□□□□□ -0.61
HMBOX1-208ENST00000521516 BRCA1P38398 1863 aaKnown RBP11.24□□□□□ -0.61
HMBOX1-208ENST00000521516 UBR3Q6ZT12 1888 aa11.24□□□□□ -0.61
HMBOX1-208ENST00000521516 ZC3H4Q9UPT8 1303 aaKnown RBP11.24□□□□□ -0.61
HMBOX1-208ENST00000521516 FCHSD2O94868 740 aa11.24□□□□□ -0.61
HMBOX1-208ENST00000521516 SRPK2P78362 688 aaKnown RBP11.24□□□□□ -0.61
HMBOX1-208ENST00000521516 AIDAQ96BJ3 306 aa11.24□□□□□ -0.61
HMBOX1-208ENST00000521516 RNF181Q9P0P0 153 aa11.24□□□□□ -0.61
HMBOX1-208ENST00000521516 MKRN1Q9UHC7 482 aaKnown RBP11.24□□□□□ -0.61
HMBOX1-208ENST00000521516 C4BP0C0L5 1744 aa11.24□□□□□ -0.61
HMBOX1-208ENST00000521516 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
HMBOX1-208ENST00000521516 VEGFAP15692 232 aaPredicted RBP11.23□□□□□ -0.61
HMBOX1-208ENST00000521516 LBX1P52954 281 aa11.23□□□□□ -0.61
HMBOX1-208ENST00000521516 STAC3Q96MF2 364 aa11.23□□□□□ -0.61
HMBOX1-208ENST00000521516 CABP2Q9NPB3 220 aa11.23□□□□□ -0.61
HMBOX1-208ENST00000521516 CNTNAP1P78357 1384 aa11.23□□□□□ -0.61
HMBOX1-208ENST00000521516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.23□□□□□ -0.61
HMBOX1-208ENST00000521516 SMIM5Q71RC9 77 aa11.23□□□□□ -0.61
HMBOX1-208ENST00000521516 ANKRD24Q8TF21 1146 aa11.23□□□□□ -0.61
HMBOX1-208ENST00000521516 WBP1LQ9NX94 342 aa11.23□□□□□ -0.61
HMBOX1-208ENST00000521516 PDE4DIPQ5VU43 2346 aa11.22□□□□□ -0.61
HMBOX1-208ENST00000521516 TTC21AQ8NDW8 1320 aa11.22□□□□□ -0.61
HMBOX1-208ENST00000521516 DPEP1P16444 411 aa11.22□□□□□ -0.61
HMBOX1-208ENST00000521516 SSFA2P28290 1259 aa11.22□□□□□ -0.61
HMBOX1-208ENST00000521516 DCAF5Q96JK2 942 aa11.22□□□□□ -0.61
HMBOX1-208ENST00000521516 AK7Q96M32 723 aa11.22□□□□□ -0.61
HMBOX1-208ENST00000521516 CCDC85CA6NKD9 419 aa11.21□□□□□ -0.62
HMBOX1-208ENST00000521516 MMP10P09238 476 aa11.21□□□□□ -0.62
HMBOX1-208ENST00000521516 KCNA3P22001 575 aa11.21□□□□□ -0.62
HMBOX1-208ENST00000521516 HSPA8P11142 646 aaKnown RBP11.2□□□□□ -0.62
HMBOX1-208ENST00000521516 KDM6AO15550 1401 aaPredicted RBP11.2□□□□□ -0.62
HMBOX1-208ENST00000521516 PHF14O94880 888 aa11.2□□□□□ -0.62
HMBOX1-208ENST00000521516 KDM2AQ9Y2K7 1162 aa11.2□□□□□ -0.62
HMBOX1-208ENST00000521516 PALLDQ8WX93 1383 aa11.2□□□□□ -0.62
HMBOX1-208ENST00000521516 SBF1O95248 1867 aa11.2□□□□□ -0.62
HMBOX1-208ENST00000521516 GLTPD2A6NH11 291 aa11.19□□□□□ -0.62
HMBOX1-208ENST00000521516 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
HMBOX1-208ENST00000521516 DCAF11Q8TEB1 546 aa11.19□□□□□ -0.62
HMBOX1-208ENST00000521516 USP31Q70CQ4 1352 aa11.18□□□□□ -0.62
HMBOX1-208ENST00000521516 ZCRB1Q8TBF4 217 aaKnown RBP11.17□□□□□ -0.62
HMBOX1-208ENST00000521516 POTECB2RU33 542 aa11.17□□□□□ -0.62
HMBOX1-208ENST00000521516 VIRMAQ69YN4 1812 aaKnown RBP11.17□□□□□ -0.62
HMBOX1-208ENST00000521516 VEGFBP49765 207 aa11.16□□□□□ -0.62
HMBOX1-208ENST00000521516 PIM2Q9P1W9 311 aa11.16□□□□□ -0.62
HMBOX1-208ENST00000521516 FAM208AQ9UK61 1670 aaKnown RBP11.16□□□□□ -0.62
HMBOX1-208ENST00000521516 LTN1O94822 1766 aa11.16□□□□□ -0.62
HMBOX1-208ENST00000521516 CCDC87Q9NVE4 849 aa11.16□□□□□ -0.62
HMBOX1-208ENST00000521516 DALRD3Q5D0E6 543 aaKnown RBP11.15□□□□□ -0.62
HMBOX1-208ENST00000521516 MEGF6O75095 1541 aa11.14□□□□□ -0.63
HMBOX1-208ENST00000521516 CHADLQ6NUI6 762 aa11.14□□□□□ -0.63
HMBOX1-208ENST00000521516 SMARCC1Q92922 1105 aaPredicted RBP11.14□□□□□ -0.63
HMBOX1-208ENST00000521516 C4AP0C0L4 1744 aa11.14□□□□□ -0.63
HMBOX1-208ENST00000521516 CENPJQ9HC77 1338 aaPredicted RBP11.14□□□□□ -0.63
HMBOX1-208ENST00000521516 NLGN1Q8N2Q7 840 aa11.13□□□□□ -0.63
HMBOX1-208ENST00000521516 LINC00116Q8NCU8 138 aa11.13□□□□□ -0.63
HMBOX1-208ENST00000521516 PASKQ96RG2 1323 aa11.13□□□□□ -0.63
HMBOX1-208ENST00000521516 MAP2P11137 1827 aaKnown RBP11.12□□□□□ -0.63
HMBOX1-208ENST00000521516 LMNB1P20700 586 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms