RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 TXNRD1Q16881 649 aa29.63■■■□□ 2.33
HOXA3-204ENST00000521401 ANO8Q9HCE9 1232 aaPredicted RBP29.63■■■□□ 2.33
HOXA3-204ENST00000521401 TNNT2P45379 298 aaPredicted RBP29.62■■■□□ 2.33
HOXA3-204ENST00000521401 RAPGEF4Q8WZA2 1011 aa29.62■■■□□ 2.33
HOXA3-204ENST00000521401 NSD2O96028 1365 aa29.62■■■□□ 2.33
HOXA3-204ENST00000521401 ANKRD26Q9UPS8 1709 aa29.62■■■□□ 2.33
HOXA3-204ENST00000521401 LRP5O75197 1615 aa29.61■■■□□ 2.33
HOXA3-204ENST00000521401 NCAPD2Q15021 1401 aa29.61■■■□□ 2.33
HOXA3-204ENST00000521401 TATP17735 454 aaPredicted RBP29.6■■■□□ 2.33
HOXA3-204ENST00000521401 EYA1Q99502 592 aa29.58■■■□□ 2.33
HOXA3-204ENST00000521401 SHANK3Q9BYB0 1731 aa29.57■■■□□ 2.32
HOXA3-204ENST00000521401 KNSTRNQ9Y448 316 aa29.56■■■□□ 2.32
HOXA3-204ENST00000521401 PRIM1P49642 420 aaKnown RBP29.55■■■□□ 2.32
HOXA3-204ENST00000521401 AMER1Q5JTC6 1135 aaPredicted RBP29.55■■■□□ 2.32
HOXA3-204ENST00000521401 EIF4A2Q14240 407 aaKnown RBP29.54■■■□□ 2.32
HOXA3-204ENST00000521401 MAP2P11137 1827 aaKnown RBP29.54■■■□□ 2.32
HOXA3-204ENST00000521401 MORC1Q86VD1 984 aa29.53■■■□□ 2.32
HOXA3-204ENST00000521401 BTAF1O14981 1849 aa29.51■■■□□ 2.31
HOXA3-204ENST00000521401 PER1O15534 1290 aaPredicted RBP29.51■■■□□ 2.31
HOXA3-204ENST00000521401 PCDH11XQ9BZA7 1347 aa29.5■■■□□ 2.31
HOXA3-204ENST00000521401 PCDH11YQ9BZA8 1340 aa29.5■■■□□ 2.31
HOXA3-204ENST00000521401 CYP27B1O15528 508 aa29.5■■■□□ 2.31
HOXA3-204ENST00000521401 SYTL4Q96C24 671 aaPredicted RBP29.5■■■□□ 2.31
HOXA3-204ENST00000521401 LRRC4BQ9NT99 713 aa29.49■■■□□ 2.31
HOXA3-204ENST00000521401 SLC15A2Q16348 729 aa29.48■■■□□ 2.31
HOXA3-204ENST00000521401 PDGFDQ9GZP0 370 aaPredicted RBP29.48■■■□□ 2.31
HOXA3-204ENST00000521401 STK32BQ9NY57 414 aa29.47■■■□□ 2.31
HOXA3-204ENST00000521401 DOT1LQ8TEK3 1739 aa29.45■■■□□ 2.31
HOXA3-204ENST00000521401 IGSF1Q8N6C5 1336 aa29.45■■■□□ 2.3
HOXA3-204ENST00000521401 PAPPAQ13219 1627 aa29.43■■■□□ 2.3
HOXA3-204ENST00000521401 SLC27A3Q5K4L6 730 aa29.43■■■□□ 2.3
HOXA3-204ENST00000521401 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.43■■■□□ 2.3
HOXA3-204ENST00000521401 NKX1-1Q15270 411 aaPredicted RBP29.42■■■□□ 2.3
HOXA3-204ENST00000521401 SPG7Q9UQ90 795 aa29.42■■■□□ 2.3
HOXA3-204ENST00000521401 PKD1L3Q7Z443 1732 aa29.42■■■□□ 2.3
HOXA3-204ENST00000521401 SPON1Q9HCB6 807 aa29.41■■■□□ 2.3
HOXA3-204ENST00000521401 ZNF827Q17R98 1081 aa29.4■■■□□ 2.3
HOXA3-204ENST00000521401 CASZ1Q86V15 1759 aa29.39■■■□□ 2.3
HOXA3-204ENST00000521401 KAT6BQ8WYB5 2073 aa29.39■■■□□ 2.3
HOXA3-204ENST00000521401 KCNQ4P56696 695 aa29.38■■■□□ 2.29
HOXA3-204ENST00000521401 AKT1S1Q96B36 256 aa29.38■■■□□ 2.29
HOXA3-204ENST00000521401 CC2D1BQ5T0F9 858 aaKnown RBP29.36■■■□□ 2.29
HOXA3-204ENST00000521401 PLEKHG2Q9H7P9 1386 aa29.36■■■□□ 2.29
HOXA3-204ENST00000521401 ZBTB7AO95365 584 aa29.35■■■□□ 2.29
HOXA3-204ENST00000521401 PHKG2P15735 406 aa29.35■■■□□ 2.29
HOXA3-204ENST00000521401 IL13P35225 146 aa29.35■■■□□ 2.29
HOXA3-204ENST00000521401 MPRIPQ6WCQ1 1025 aa29.34■■■□□ 2.29
HOXA3-204ENST00000521401 IFNL2Q8IZJ0 200 aa29.34■■■□□ 2.29
HOXA3-204ENST00000521401 NPC1L1Q9UHC9 1359 aa29.34■■■□□ 2.29
HOXA3-204ENST00000521401 MTHFSP49914 203 aa29.33■■■□□ 2.29
HOXA3-204ENST00000521401 AEBP1Q8IUX7 1158 aa29.33■■■□□ 2.29
HOXA3-204ENST00000521401 TOGARAM1Q9Y4F4 1720 aa29.32■■■□□ 2.28
HOXA3-204ENST00000521401 CCNL1Q9UK58 526 aaPredicted RBP29.32■■■□□ 2.28
HOXA3-204ENST00000521401 LY75O60449 1722 aa29.31■■■□□ 2.28
HOXA3-204ENST00000521401 PIGBQ92521 554 aa29.31■■■□□ 2.28
HOXA3-204ENST00000521401 PTGER2P43116 358 aa29.3■■■□□ 2.28
HOXA3-204ENST00000521401 ATF5Q9Y2D1 282 aaPredicted RBP29.3■■■□□ 2.28
HOXA3-204ENST00000521401 PALLDQ8WX93 1383 aa29.28■■■□□ 2.28
HOXA3-204ENST00000521401 SULT6B1Q6IMI4 303 aa29.28■■■□□ 2.28
HOXA3-204ENST00000521401 KDRP35968 1356 aa29.27■■■□□ 2.28
HOXA3-204ENST00000521401 PLEKHO1Q53GL0 409 aaPredicted RBP29.27■■■□□ 2.28
HOXA3-204ENST00000521401 MTFR1LQ9H019 292 aa29.27■■■□□ 2.28
HOXA3-204ENST00000521401 SGIP1Q9BQI5 828 aa29.26■■■□□ 2.27
HOXA3-204ENST00000521401 PPP1R1BQ9UD71 204 aaPredicted RBP29.26■■■□□ 2.27
HOXA3-204ENST00000521401 PNPLA7Q6ZV29 1317 aa29.25■■■□□ 2.27
HOXA3-204ENST00000521401 AMOTQ4VCS5 1084 aa29.24■■■□□ 2.27
HOXA3-204ENST00000521401 SMARCC1Q92922 1105 aaPredicted RBP29.24■■■□□ 2.27
HOXA3-204ENST00000521401 CNGB1Q14028 1251 aaPredicted RBP29.23■■■□□ 2.27
HOXA3-204ENST00000521401 TMOD3Q9NYL9 352 aa29.22■■■□□ 2.27
HOXA3-204ENST00000521401 TFCP2L1Q9NZI6 479 aa29.22■■■□□ 2.27
HOXA3-204ENST00000521401 ZNF530Q6P9A1 599 aaPredicted RBP29.21■■■□□ 2.27
HOXA3-204ENST00000521401 ITGB4P16144 1822 aa29.2■■■□□ 2.27
HOXA3-204ENST00000521401 HSP90AB1P08238 724 aaKnown RBP29.19■■■□□ 2.26
HOXA3-204ENST00000521401 DCAF5Q96JK2 942 aa29.19■■■□□ 2.26
HOXA3-204ENST00000521401 ASAP1Q9ULH1 1129 aa29.19■■■□□ 2.26
HOXA3-204ENST00000521401 ERVV-2B6SEH9 535 aa29.18■■■□□ 2.26
HOXA3-204ENST00000521401 DIAPH1O60610 1272 aaKnown RBP29.18■■■□□ 2.26
HOXA3-204ENST00000521401 SLC16A10Q8TF71 515 aa29.18■■■□□ 2.26
HOXA3-204ENST00000521401 KDM6AO15550 1401 aaPredicted RBP29.18■■■□□ 2.26
HOXA3-204ENST00000521401 ATG3Q9NT62 314 aa29.17■■■□□ 2.26
HOXA3-204ENST00000521401 COL3A1P02461 1466 aaPredicted RBP29.16■■■□□ 2.26
HOXA3-204ENST00000521401 QSER1Q2KHR3 1735 aa29.15■■■□□ 2.26
HOXA3-204ENST00000521401 LOC102724428A0A0B4J2F2 783 aa29.15■■■□□ 2.26
HOXA3-204ENST00000521401 HMOX1P09601 288 aa29.15■■■□□ 2.26
HOXA3-204ENST00000521401 SIK1P57059 783 aa29.15■■■□□ 2.26
HOXA3-204ENST00000521401 COL23A1Q86Y22 540 aaPredicted RBP29.15■■■□□ 2.26
HOXA3-204ENST00000521401 HMGB2P26583 209 aaKnown RBP29.12■■■□□ 2.25
HOXA3-204ENST00000521401 C1orf141Q5JVX7 400 aa29.12■■■□□ 2.25
HOXA3-204ENST00000521401 TUBGCP6Q96RT7 1819 aa29.12■■■□□ 2.25
HOXA3-204ENST00000521401 C5P01031 1676 aa29.1■■■□□ 2.25
HOXA3-204ENST00000521401 ITPK1Q13572 414 aa29.1■■■□□ 2.25
HOXA3-204ENST00000521401 AMIGO3Q86WK7 504 aa29.1■■■□□ 2.25
HOXA3-204ENST00000521401 LINC00116Q8NCU8 138 aa29.1■■■□□ 2.25
HOXA3-204ENST00000521401 ARXQ96QS3 562 aa29.1■■■□□ 2.25
HOXA3-204ENST00000521401 CABP4P57796 275 aa29.09■■■□□ 2.25
HOXA3-204ENST00000521401 FHDC1Q9C0D6 1143 aaPredicted RBP29.09■■■□□ 2.25
HOXA3-204ENST00000521401 AKAP4Q5JQC9 854 aa29.08■■■□□ 2.25
HOXA3-204ENST00000521401 SLC4A9Q96Q91 983 aa29.08■■■□□ 2.25
HOXA3-204ENST00000521401 ATP6V1AP38606 617 aa29.07■■■□□ 2.24
HOXA3-204ENST00000521401 SYT17Q9BSW7 474 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms