RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 IGSF1Q8N6C5 1336 aa11.09□□□□□ -0.63
CTNNA1-227ENST00000521387 GCP02774 474 aa11.08□□□□□ -0.64
CTNNA1-227ENST00000521387 TOM1L2Q6ZVM7 507 aa11.08□□□□□ -0.64
CTNNA1-227ENST00000521387 ABHD8Q96I13 439 aa11.08□□□□□ -0.64
CTNNA1-227ENST00000521387 PRDM10Q9NQV6 1147 aa11.08□□□□□ -0.64
CTNNA1-227ENST00000521387 CICQ96RK0 1608 aaPredicted RBP11.08□□□□□ -0.64
CTNNA1-227ENST00000521387 USP6P35125 1406 aa11.08□□□□□ -0.64
CTNNA1-227ENST00000521387 KIAA1210Q9ULL0 1709 aa11.07□□□□□ -0.64
CTNNA1-227ENST00000521387 BRD4O60885 1362 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-227ENST00000521387 CDCA7Q9BWT1 371 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-227ENST00000521387 AXIN2Q9Y2T1 843 aa11.07□□□□□ -0.64
CTNNA1-227ENST00000521387 WNK3Q9BYP7 1800 aa11.07□□□□□ -0.64
CTNNA1-227ENST00000521387 EXOC5O00471 708 aa11.06□□□□□ -0.64
CTNNA1-227ENST00000521387 C14orf93Q9H972 538 aaKnown RBP11.06□□□□□ -0.64
CTNNA1-227ENST00000521387 BTAF1O14981 1849 aa11.05□□□□□ -0.64
CTNNA1-227ENST00000521387 WASLO00401 505 aaPredicted RBP11.05□□□□□ -0.64
CTNNA1-227ENST00000521387 SLC27A3Q5K4L6 730 aa11.05□□□□□ -0.64
CTNNA1-227ENST00000521387 TNRC18O15417 2968 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-227ENST00000521387 CFAP70Q5T0N1 1121 aa11.04□□□□□ -0.64
CTNNA1-227ENST00000521387 C16orf71Q8IYS4 520 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-227ENST00000521387 WDR17Q8IZU2 1322 aa11.04□□□□□ -0.64
CTNNA1-227ENST00000521387 MINK1Q8N4C8 1332 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-227ENST00000521387 PDE4DIPQ5VU43 2346 aa11.03□□□□□ -0.64
CTNNA1-227ENST00000521387 RGL3Q3MIN7 710 aa11.03□□□□□ -0.64
CTNNA1-227ENST00000521387 ABTB2Q8N961 1025 aa11.03□□□□□ -0.64
CTNNA1-227ENST00000521387 POGKQ9P215 609 aa11.03□□□□□ -0.64
CTNNA1-227ENST00000521387 COL18A1P39060 1754 aa11.03□□□□□ -0.64
CTNNA1-227ENST00000521387 CARD10Q9BWT7 1032 aa11.02□□□□□ -0.65
CTNNA1-227ENST00000521387 RRAGCQ9HB90 399 aa11.02□□□□□ -0.65
CTNNA1-227ENST00000521387 SPATA31E1Q6ZUB1 1445 aa11.01□□□□□ -0.65
CTNNA1-227ENST00000521387 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
CTNNA1-227ENST00000521387 ZBTB7CA1YPR0 619 aa11.01□□□□□ -0.65
CTNNA1-227ENST00000521387 SMC1BQ8NDV3 1235 aa11.01□□□□□ -0.65
CTNNA1-227ENST00000521387 OTUD5Q96G74 571 aa11.01□□□□□ -0.65
CTNNA1-227ENST00000521387 POLR3AO14802 1390 aaPredicted RBP11.01□□□□□ -0.65
CTNNA1-227ENST00000521387 KCPQ6ZWJ8 1503 aa11□□□□□ -0.65
CTNNA1-227ENST00000521387 NUDT16Q96DE0 195 aaKnown RBP11□□□□□ -0.65
CTNNA1-227ENST00000521387 ACEP12821 1306 aa11□□□□□ -0.65
CTNNA1-227ENST00000521387 EIF3AQ14152 1382 aaKnown RBP11□□□□□ -0.65
CTNNA1-227ENST00000521387 POTEB2H3BUK9 544 aa10.99□□□□□ -0.65
CTNNA1-227ENST00000521387 PXDNLA1KZ92 1463 aa10.99□□□□□ -0.65
CTNNA1-227ENST00000521387 LBX1P52954 281 aa10.98□□□□□ -0.65
CTNNA1-227ENST00000521387 C9orf131Q5VYM1 1079 aa10.98□□□□□ -0.65
CTNNA1-227ENST00000521387 SMIM5Q71RC9 77 aa10.98□□□□□ -0.65
CTNNA1-227ENST00000521387 NLRP13Q86W25 1043 aa10.98□□□□□ -0.65
CTNNA1-227ENST00000521387 TRPM1Q7Z4N2 1603 aa10.98□□□□□ -0.65
CTNNA1-227ENST00000521387 CCDC85CA6NKD9 419 aa10.97□□□□□ -0.65
CTNNA1-227ENST00000521387 CTCFP49711 727 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-227ENST00000521387 PCGF6Q9BYE7 350 aa10.97□□□□□ -0.65
CTNNA1-227ENST00000521387 MKRN1Q9UHC7 482 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-227ENST00000521387 KAT6BQ8WYB5 2073 aa10.96□□□□□ -0.65
CTNNA1-227ENST00000521387 ABCC6O95255 1503 aa10.96□□□□□ -0.65
CTNNA1-227ENST00000521387 ERBB3P21860 1342 aa10.96□□□□□ -0.65
CTNNA1-227ENST00000521387 GALR2O43603 387 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-227ENST00000521387 ARHGAP27Q6ZUM4 889 aa10.96□□□□□ -0.65
CTNNA1-227ENST00000521387 AMIGO3Q86WK7 504 aa10.96□□□□□ -0.65
CTNNA1-227ENST00000521387 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.65
CTNNA1-227ENST00000521387 TRAK1Q9UPV9 953 aa10.96□□□□□ -0.65
CTNNA1-227ENST00000521387 PPIP5K1Q6PFW1 1433 aa10.95□□□□□ -0.66
CTNNA1-227ENST00000521387 PLEKHG3A1L390 1219 aa10.95□□□□□ -0.66
CTNNA1-227ENST00000521387 CLCN6P51797 869 aa10.94□□□□□ -0.66
CTNNA1-227ENST00000521387 SLIT3O75094 1523 aa10.94□□□□□ -0.66
CTNNA1-227ENST00000521387 NSD2O96028 1365 aa10.93□□□□□ -0.66
CTNNA1-227ENST00000521387 KDM2BQ8NHM5 1336 aa10.93□□□□□ -0.66
CTNNA1-227ENST00000521387 QRICH2Q9H0J4 1663 aa10.93□□□□□ -0.66
CTNNA1-227ENST00000521387 HSPA8P11142 646 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-227ENST00000521387 ITGAEP38570 1179 aa10.93□□□□□ -0.66
CTNNA1-227ENST00000521387 ARHGEF25Q86VW2 580 aa10.93□□□□□ -0.66
CTNNA1-227ENST00000521387 WBP1LQ9NX94 342 aa10.93□□□□□ -0.66
CTNNA1-227ENST00000521387 BCS1LQ9Y276 419 aa10.93□□□□□ -0.66
CTNNA1-227ENST00000521387 KIAA1551Q9HCM1 1747 aa10.92□□□□□ -0.66
CTNNA1-227ENST00000521387 CCDC7Q96M83 1385 aa10.92□□□□□ -0.66
CTNNA1-227ENST00000521387 PLEKHG2Q9H7P9 1386 aa10.92□□□□□ -0.66
CTNNA1-227ENST00000521387 ADGRB1O14514 1584 aa10.92□□□□□ -0.66
CTNNA1-227ENST00000521387 POTEMA6NI47 508 aa10.92□□□□□ -0.66
CTNNA1-227ENST00000521387 CCNL1Q9UK58 526 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-227ENST00000521387 LY75O60449 1722 aa10.92□□□□□ -0.66
CTNNA1-227ENST00000521387 RGPD5Q99666 1765 aa10.91□□□□□ -0.66
CTNNA1-227ENST00000521387 A0A0G2JLW4 131 aa10.91□□□□□ -0.66
CTNNA1-227ENST00000521387 CSB-PGBD3P0DP91 1061 aa10.91□□□□□ -0.66
CTNNA1-227ENST00000521387 PRIM1P49642 420 aaKnown RBP10.9□□□□□ -0.66
CTNNA1-227ENST00000521387 CDK19Q9BWU1 502 aa10.9□□□□□ -0.66
CTNNA1-227ENST00000521387 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
CTNNA1-227ENST00000521387 CCDC61Q9Y6R9 512 aa10.9□□□□□ -0.66
CTNNA1-227ENST00000521387 CPSF1Q10570 1443 aaKnown RBP10.9□□□□□ -0.66
CTNNA1-227ENST00000521387 CNTNAP1P78357 1384 aa10.9□□□□□ -0.67
CTNNA1-227ENST00000521387 ITSN1Q15811 1721 aa10.89□□□□□ -0.67
CTNNA1-227ENST00000521387 NLRP6P59044 892 aa10.89□□□□□ -0.67
CTNNA1-227ENST00000521387 USP54Q70EL1 1684 aa10.89□□□□□ -0.67
CTNNA1-227ENST00000521387 POTECB2RU33 542 aa10.88□□□□□ -0.67
CTNNA1-227ENST00000521387 VEGFBP49765 207 aa10.88□□□□□ -0.67
CTNNA1-227ENST00000521387 TRIM26Q12899 539 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-227ENST00000521387 PKD1L3Q7Z443 1732 aa10.88□□□□□ -0.67
CTNNA1-227ENST00000521387 AIDAQ96BJ3 306 aa10.88□□□□□ -0.67
CTNNA1-227ENST00000521387 PIK3C2AO00443 1686 aa10.88□□□□□ -0.67
CTNNA1-227ENST00000521387 TNRC6CQ9HCJ0 1690 aaKnown RBP10.88□□□□□ -0.67
CTNNA1-227ENST00000521387 IL2RBP14784 551 aa10.87□□□□□ -0.67
CTNNA1-227ENST00000521387 KCNA3P22001 575 aa10.87□□□□□ -0.67
CTNNA1-227ENST00000521387 POTEGQ6S5H5 508 aa10.87□□□□□ -0.67
CTNNA1-227ENST00000521387 RNF181Q9P0P0 153 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms