RNA–Protein interactions for RNA: ENST00000521375.5

RUNX1T1-233, Transcript of RUNX1 translocation partner 1, human

TSL 2

Gene RUNX1T1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-233	ENST00000521375	ACE	P12821	1306 aa		11.71	□□□□□ -0.53
RUNX1T1-233	ENST00000521375	CFAP70	Q5T0N1	1121 aa		11.71	□□□□□ -0.53
RUNX1T1-233	ENST00000521375	NUDT16	Q96DE0	195 aa	Known RBP	11.71	□□□□□ -0.53
RUNX1T1-233	ENST00000521375	C14orf93	Q9H972	538 aa	Known RBP	11.71	□□□□□ -0.53
RUNX1T1-233	ENST00000521375	CCNL1	Q9UK58	526 aa	Predicted RBP	11.71	□□□□□ -0.53
RUNX1T1-233	ENST00000521375	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.7	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	ITGAE	P38570	1179 aa		11.69	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	CREBZF	Q9NS37	354 aa		11.69	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	CPSF1	Q10570	1443 aa	Known RBP	11.69	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	SPATA31E1	Q6ZUB1	1445 aa		11.69	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	USP54	Q70EL1	1684 aa		11.68	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	QRICH2	Q9H0J4	1663 aa		11.68	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	HSPA8	P11142	646 aa	Known RBP	11.68	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	SYTL4	Q96C24	671 aa	Predicted RBP	11.68	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	RNF181	Q9P0P0	153 aa		11.68	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	TRAK1	Q9UPV9	953 aa		11.68	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	SLIT3	O75094	1523 aa		11.68	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	CNTNAP1	P78357	1384 aa		11.67	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	KIAA1551	Q9HCM1	1747 aa		11.67	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	FLAD1	Q8NFF5	587 aa		11.67	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	C5	P01031	1676 aa		11.67	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	FCHSD2	O94868	740 aa		11.66	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	WBP1L	Q9NX94	342 aa		11.66	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	VEGFA	P15692	232 aa	Predicted RBP	11.65	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	PRPF38B	Q5VTL8	546 aa	Known RBP	11.65	□□□□□ -0.54
RUNX1T1-233	ENST00000521375	KIF13B	Q9NQT8	1826 aa		11.65	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	DOT1L	Q8TEK3	1739 aa		11.64	□□□□□ -0.55
RUNX1T1-233	ENST00000521375		A0A0G2JLW4	131 aa		11.64	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	NLRP6	P59044	892 aa		11.64	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	VIRMA	Q69YN4	1812 aa	Known RBP	11.63	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	ARFGEF1	Q9Y6D6	1849 aa		11.63	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	IL2RB	P14784	551 aa		11.63	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	PRIM1	P49642	420 aa	Known RBP	11.63	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	VEGFB	P49765	207 aa		11.63	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	SMIM5	Q71RC9	77 aa		11.63	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	BRCA1	P38398	1863 aa	Known RBP	11.62	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	ADGRB1	O14514	1584 aa		11.62	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	ERBB3	P21860	1342 aa		11.61	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	PHF14	O94880	888 aa		11.61	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	TGFB2	P61812	414 aa		11.61	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	DDX54	Q8TDD1	881 aa	Known RBP	11.61	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.61	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	CCDC61	Q9Y6R9	512 aa		11.61	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	NSD2	O96028	1365 aa		11.61	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	ANKRD36B	Q8N2N9	1353 aa		11.61	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	SBF1	O95248	1867 aa		11.61	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	TOGARAM1	Q9Y4F4	1720 aa		11.6	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	USP47	Q96K76	1375 aa		11.6	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	PLEKHG3	A1L390	1219 aa		11.6	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	SOX12	O15370	315 aa		11.6	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	ARHGEF25	Q86VW2	580 aa		11.6	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	NLRP2	Q9NX02	1062 aa		11.6	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	TAF1L	Q8IZX4	1826 aa		11.6	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	DPEP1	P16444	411 aa		11.59	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	CDK19	Q9BWU1	502 aa		11.59	□□□□□ -0.55
RUNX1T1-233	ENST00000521375	UBR3	Q6ZT12	1888 aa		11.58	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	AMIGO3	Q86WK7	504 aa		11.58	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	AK7	Q96M32	723 aa		11.58	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	C4B	P0C0L5	1744 aa		11.57	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	GLTPD2	A6NH11	291 aa		11.57	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	MMP10	P09238	476 aa		11.57	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.57	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.56	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	MAP2K1	Q02750	393 aa	Predicted RBP	11.56	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	MCOLN1	Q9GZU1	580 aa		11.56	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	NSD3	Q9BZ95	1437 aa		11.55	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	CHADL	Q6NUI6	762 aa		11.55	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	DCAF5	Q96JK2	942 aa		11.55	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	TIAM2	Q8IVF5	1701 aa		11.55	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	CUL9	Q8IWT3	2517 aa		11.54	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	KCNH5	Q8NCM2	988 aa		11.54	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	HMGB2	P26583	209 aa	Known RBP	11.53	□□□□□ -0.56
RUNX1T1-233	ENST00000521375	NFAT5	O94916	1531 aa		11.52	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	DLL1	O00548	723 aa		11.52	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	SOX10	P56693	466 aa		11.52	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	RASSF7	Q02833	373 aa		11.52	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	DALRD3	Q5D0E6	543 aa	Known RBP	11.52	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	BEGAIN	Q9BUH8	593 aa		11.52	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	PIM2	Q9P1W9	311 aa		11.52	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	TMEM88B	A6NKF7	163 aa		11.51	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	POTEC	B2RU33	542 aa		11.51	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	SSFA2	P28290	1259 aa		11.51	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	GCC1	Q96CN9	775 aa		11.51	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	CCDC87	Q9NVE4	849 aa		11.51	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	PALLD	Q8WX93	1383 aa		11.51	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	POTEI	P0CG38	1075 aa		11.5	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	POTEJ	P0CG39	1038 aa		11.5	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	KCNA3	P22001	575 aa		11.5	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.5	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	TSKS	Q9UJT2	592 aa		11.5	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	PASK	Q96RG2	1323 aa		11.5	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	WDR33	Q9C0J8	1336 aa	Known RBP	11.5	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	KDM6A	O15550	1401 aa	Predicted RBP	11.5	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	CASP8AP2	Q9UKL3	1982 aa		11.49	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	DGKZ	Q13574	1117 aa		11.49	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	C4A	P0C0L4	1744 aa		11.49	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	LMNB1	P20700	586 aa		11.48	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	DEFB115	Q30KQ5	88 aa		11.48	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	HABP4	Q5JVS0	413 aa	Known RBP	11.48	□□□□□ -0.57
RUNX1T1-233	ENST00000521375	CCDC88A	Q3V6T2	1871 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms