RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 LZTS3O60299 673 aaPredicted RBP6.16□□□□□ -1.42
HMGN1P28-201ENST00000521340 BMP1P13497 986 aa6.16□□□□□ -1.42
HMGN1P28-201ENST00000521340 SSFA2P28290 1259 aa6.16□□□□□ -1.42
HMGN1P28-201ENST00000521340 CLDN10P78369 228 aa6.16□□□□□ -1.42
HMGN1P28-201ENST00000521340 TMCO4Q5TGY1 634 aa6.16□□□□□ -1.42
HMGN1P28-201ENST00000521340 KIFC2Q96AC6 838 aa6.16□□□□□ -1.42
HMGN1P28-201ENST00000521340 TLL2Q9Y6L7 1015 aa6.16□□□□□ -1.42
HMGN1P28-201ENST00000521340 WASF2Q9Y6W5 498 aa6.16□□□□□ -1.42
HMGN1P28-201ENST00000521340 ESPNB1AK53 854 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L15C9J2P7 530 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L10C9JJH3 530 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L13C9JLJ4 530 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L12C9JPN9 530 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L11C9JVI0 530 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L21D6R901 530 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L18D6R9N7 530 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L22D6RA61 530 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L17D6RBQ6 530 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L19D6RCP7 530 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L20D6RJB6 530 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 WIPF1O43516 503 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 VARSP26640 1264 aaKnown RBP6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 USP17L24Q0WX57 530 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 ERFEQ4G0M1 354 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 NBPF14Q5TI25 921 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 MPNDQ8N594 471 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 FOXJ1Q92949 421 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 NOVA2Q9UNW9 492 aaKnown RBP6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 IVNS1ABPQ9Y6Y0 642 aa6.15□□□□□ -1.42
HMGN1P28-201ENST00000521340 PATL2C9JE40 543 aaKnown RBP6.14□□□□□ -1.43
HMGN1P28-201ENST00000521340 MAP7D1Q3KQU3 841 aa6.14□□□□□ -1.43
HMGN1P28-201ENST00000521340 RNF135Q8IUD6 432 aa6.14□□□□□ -1.43
HMGN1P28-201ENST00000521340 CLP1Q92989 425 aaKnown RBP6.14□□□□□ -1.43
HMGN1P28-201ENST00000521340 ARHGAP9Q9BRR9 750 aa6.14□□□□□ -1.43
HMGN1P28-201ENST00000521340 CDCA7Q9BWT1 371 aaPredicted RBP6.14□□□□□ -1.43
HMGN1P28-201ENST00000521340 KIAA1024Q9UPX6 916 aa6.14□□□□□ -1.43
HMGN1P28-201ENST00000521340 PCDHB9Q9Y5E1 797 aa6.14□□□□□ -1.43
HMGN1P28-201ENST00000521340 GIGYF1O75420 1035 aaPredicted RBP6.13□□□□□ -1.43
HMGN1P28-201ENST00000521340 NOM1Q5C9Z4 860 aaKnown RBP6.13□□□□□ -1.43
HMGN1P28-201ENST00000521340 ANKMY2Q8IV38 441 aa6.13□□□□□ -1.43
HMGN1P28-201ENST00000521340 PCDHGA11Q9Y5H2 935 aa6.13□□□□□ -1.43
HMGN1P28-201ENST00000521340 ATP5J2-PTCD1G3V325 749 aa6.12□□□□□ -1.43
HMGN1P28-201ENST00000521340 RASA1P20936 1047 aa6.12□□□□□ -1.43
HMGN1P28-201ENST00000521340 NNTQ13423 1086 aa6.12□□□□□ -1.43
HMGN1P28-201ENST00000521340 SLFNL1Q499Z3 407 aa6.12□□□□□ -1.43
HMGN1P28-201ENST00000521340 SND1Q7KZF4 910 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGN1P28-201ENST00000521340 TRMT44Q8IYL2 757 aaKnown RBP6.12□□□□□ -1.43
HMGN1P28-201ENST00000521340 OGFOD1Q8N543 542 aa6.12□□□□□ -1.43
HMGN1P28-201ENST00000521340 KLF16Q9BXK1 252 aaPredicted RBP6.12□□□□□ -1.43
HMGN1P28-201ENST00000521340 OCLNQ16625 522 aa6.11□□□□□ -1.43
HMGN1P28-201ENST00000521340 SIX5Q8N196 739 aa6.11□□□□□ -1.43
HMGN1P28-201ENST00000521340 ZNF428Q96B54 188 aa6.11□□□□□ -1.43
HMGN1P28-201ENST00000521340 ZFP42Q96MM3 310 aa6.11□□□□□ -1.43
HMGN1P28-201ENST00000521340 TIMP2P16035 220 aa6.1□□□□□ -1.43
HMGN1P28-201ENST00000521340 SCNN1AP37088 669 aa6.1□□□□□ -1.43
HMGN1P28-201ENST00000521340 DPYDQ12882 1025 aa6.1□□□□□ -1.43
HMGN1P28-201ENST00000521340 FOXD4L5Q5VV16 416 aaPredicted RBP6.1□□□□□ -1.43
HMGN1P28-201ENST00000521340 ZBTB33Q86T24 672 aa6.1□□□□□ -1.43
HMGN1P28-201ENST00000521340 LARGE2Q8N3Y3 721 aa6.1□□□□□ -1.43
HMGN1P28-201ENST00000521340 FOXD4L4Q8WXT5 416 aaPredicted RBP6.1□□□□□ -1.43
HMGN1P28-201ENST00000521340 ZNF592Q92610 1267 aa6.1□□□□□ -1.43
HMGN1P28-201ENST00000521340 CDK15Q96Q40 435 aa6.1□□□□□ -1.43
HMGN1P28-201ENST00000521340 NXF1Q9UBU9 619 aaKnown RBP6.1□□□□□ -1.43
HMGN1P28-201ENST00000521340 WDR4P57081 412 aaKnown RBP6.09□□□□□ -1.43
HMGN1P28-201ENST00000521340 ECM1Q16610 540 aa6.09□□□□□ -1.43
HMGN1P28-201ENST00000521340 TAS1R3Q7RTX0 852 aa6.09□□□□□ -1.43
HMGN1P28-201ENST00000521340 BPHLQ86WA6 291 aaPredicted RBP6.09□□□□□ -1.43
HMGN1P28-201ENST00000521340 C1orf216Q8TAB5 229 aa6.09□□□□□ -1.43
HMGN1P28-201ENST00000521340 FAM200AQ8TCP9 573 aa6.09□□□□□ -1.43
HMGN1P28-201ENST00000521340 ADH1CP00326 375 aa6.08□□□□□ -1.44
HMGN1P28-201ENST00000521340 NR3C2P08235 984 aa6.08□□□□□ -1.44
HMGN1P28-201ENST00000521340 GRM5P41594 1212 aa6.08□□□□□ -1.44
HMGN1P28-201ENST00000521340 VEGFBP49765 207 aa6.08□□□□□ -1.44
HMGN1P28-201ENST00000521340 SWI5Q1ZZU3 235 aa6.08□□□□□ -1.44
HMGN1P28-201ENST00000521340 EML3Q32P44 896 aa6.08□□□□□ -1.44
HMGN1P28-201ENST00000521340 MRPL14Q6P1L8 145 aaKnown RBP6.08□□□□□ -1.44
HMGN1P28-201ENST00000521340 LARP1Q6PKG0 1096 aaKnown RBP6.08□□□□□ -1.44
HMGN1P28-201ENST00000521340 DZIP3Q86Y13 1208 aaKnown RBP6.08□□□□□ -1.44
HMGN1P28-201ENST00000521340 DNAAF2Q9NVR5 837 aaKnown RBP6.08□□□□□ -1.44
HMGN1P28-201ENST00000521340 INSM1Q01101 510 aaPredicted RBP6.07□□□□□ -1.44
HMGN1P28-201ENST00000521340 ARID5BQ14865 1188 aa6.07□□□□□ -1.44
HMGN1P28-201ENST00000521340 DNAJC14Q6Y2X3 702 aaPredicted RBP6.07□□□□□ -1.44
HMGN1P28-201ENST00000521340 CARD14Q9BXL6 1004 aa6.07□□□□□ -1.44
HMGN1P28-201ENST00000521340 ZFAND3Q9H8U3 227 aa6.07□□□□□ -1.44
HMGN1P28-201ENST00000521340 STK17AQ9UEE5 414 aa6.07□□□□□ -1.44
HMGN1P28-201ENST00000521340 MAGEB6P1A0A0J9YX57 407 aa6.06□□□□□ -1.44
HMGN1P28-201ENST00000521340 SOBPA7XYQ1 873 aa6.06□□□□□ -1.44
HMGN1P28-201ENST00000521340 H3BM21 787 aa6.06□□□□□ -1.44
HMGN1P28-201ENST00000521340 LORP23490 312 aaPredicted RBP6.06□□□□□ -1.44
HMGN1P28-201ENST00000521340 ARID4AP29374 1257 aaPredicted RBP6.06□□□□□ -1.44
HMGN1P28-201ENST00000521340 GMPRP36959 345 aa6.06□□□□□ -1.44
HMGN1P28-201ENST00000521340 TRIM50Q86XT4 487 aa6.06□□□□□ -1.44
HMGN1P28-201ENST00000521340 SEPT12Q8IYM1 358 aa6.06□□□□□ -1.44
HMGN1P28-201ENST00000521340 ZNF594Q96JF6 807 aaPredicted RBP6.06□□□□□ -1.44
HMGN1P28-201ENST00000521340 PURBQ96QR8 312 aaKnown RBP6.06□□□□□ -1.44
HMGN1P28-201ENST00000521340 DOLKQ9UPQ8 538 aa6.06□□□□□ -1.44
HMGN1P28-201ENST00000521340 NOD1Q9Y239 953 aa6.06□□□□□ -1.44
HMGN1P28-201ENST00000521340 ERBB4Q15303 1308 aa6.05□□□□□ -1.44
HMGN1P28-201ENST00000521340 ZIC2O95409 532 aaPredicted RBP6.05□□□□□ -1.44
HMGN1P28-201ENST00000521340 ATP2B4P23634 1241 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms