RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 NLGN2Q8NFZ4 835 aa19.1■□□□□ 0.65
SPARC-203ENST00000521327 TESK2Q96S53 571 aa19.1■□□□□ 0.65
SPARC-203ENST00000521327 CCNL1Q9UK58 526 aaPredicted RBP19.1■□□□□ 0.65
SPARC-203ENST00000521327 LTN1O94822 1766 aa19.09■□□□□ 0.65
SPARC-203ENST00000521327 TONSLQ96HA7 1378 aa19.09■□□□□ 0.65
SPARC-203ENST00000521327 MSH5O43196 834 aa19.09■□□□□ 0.65
SPARC-203ENST00000521327 GOLGB1Q14789 3259 aaKnown RBP19.09■□□□□ 0.65
SPARC-203ENST00000521327 NBPF6Q5VWK0 638 aa19.08■□□□□ 0.64
SPARC-203ENST00000521327 NBPF4Q96M43 638 aa19.08■□□□□ 0.64
SPARC-203ENST00000521327 NSD2O96028 1365 aa19.07■□□□□ 0.64
SPARC-203ENST00000521327 RRS1Q15050 365 aaKnown RBP19.07■□□□□ 0.64
SPARC-203ENST00000521327 KAT6BQ8WYB5 2073 aa19.07■□□□□ 0.64
SPARC-203ENST00000521327 COL23A1Q86Y22 540 aaPredicted RBP19.06■□□□□ 0.64
SPARC-203ENST00000521327 USHBP1Q8N6Y0 703 aa19.06■□□□□ 0.64
SPARC-203ENST00000521327 USP47Q96K76 1375 aa19.05■□□□□ 0.64
SPARC-203ENST00000521327 MEGF6O75095 1541 aa19.05■□□□□ 0.64
SPARC-203ENST00000521327 GIGYF1O75420 1035 aaPredicted RBP19.04■□□□□ 0.64
SPARC-203ENST00000521327 RAPGEF4Q8WZA2 1011 aa19.04■□□□□ 0.64
SPARC-203ENST00000521327 GGNBP2Q9H3C7 697 aa19.04■□□□□ 0.64
SPARC-203ENST00000521327 FYB1O15117 783 aa19.03■□□□□ 0.64
SPARC-203ENST00000521327 SLC24A1O60721 1099 aa19.03■□□□□ 0.64
SPARC-203ENST00000521327 MSL1Q68DK7 614 aa19.03■□□□□ 0.64
SPARC-203ENST00000521327 GRIN3BO60391 1043 aa19.02■□□□□ 0.64
SPARC-203ENST00000521327 YBX3P16989 372 aaKnown RBP eCLIP19.02■□□□□ 0.64
SPARC-203ENST00000521327 CGNL1Q0VF96 1302 aa19.01■□□□□ 0.63
SPARC-203ENST00000521327 TATP17735 454 aaPredicted RBP19.01■□□□□ 0.63
SPARC-203ENST00000521327 HSP90AB2PQ58FF8 381 aa19■□□□□ 0.63
SPARC-203ENST00000521327 RTL1A6NKG5 1358 aa19■□□□□ 0.63
SPARC-203ENST00000521327 MPRIPQ6WCQ1 1025 aa18.99■□□□□ 0.63
SPARC-203ENST00000521327 CHD4Q14839 1912 aa18.98■□□□□ 0.63
SPARC-203ENST00000521327 TMF1P82094 1093 aa18.97■□□□□ 0.63
SPARC-203ENST00000521327 FAM208AQ9UK61 1670 aaKnown RBP18.97■□□□□ 0.63
SPARC-203ENST00000521327 SMG6Q86US8 1419 aaKnown RBP18.97■□□□□ 0.63
SPARC-203ENST00000521327 FLAD1Q8NFF5 587 aa18.96■□□□□ 0.63
SPARC-203ENST00000521327 PCDH11XQ9BZA7 1347 aa18.96■□□□□ 0.63
SPARC-203ENST00000521327 PCDH11YQ9BZA8 1340 aa18.96■□□□□ 0.63
SPARC-203ENST00000521327 PALLDQ8WX93 1383 aa18.95■□□□□ 0.62
SPARC-203ENST00000521327 CYP27B1O15528 508 aa18.95■□□□□ 0.62
SPARC-203ENST00000521327 HMGB2P26583 209 aaKnown RBP18.95■□□□□ 0.62
SPARC-203ENST00000521327 CD2APQ9Y5K6 639 aa18.95■□□□□ 0.62
SPARC-203ENST00000521327 INSRP06213 1382 aa18.94■□□□□ 0.62
SPARC-203ENST00000521327 DOT1LQ8TEK3 1739 aa18.94■□□□□ 0.62
SPARC-203ENST00000521327 QSER1Q2KHR3 1735 aa18.94■□□□□ 0.62
SPARC-203ENST00000521327 LY75O60449 1722 aa18.92■□□□□ 0.62
SPARC-203ENST00000521327 SMARCC1Q92922 1105 aaPredicted RBP18.92■□□□□ 0.62
SPARC-203ENST00000521327 FLT4P35916 1363 aa18.92■□□□□ 0.62
SPARC-203ENST00000521327 COL24A1Q17RW2 1714 aa18.91■□□□□ 0.62
SPARC-203ENST00000521327 SMIM5Q71RC9 77 aa18.91■□□□□ 0.62
SPARC-203ENST00000521327 AMIGO3Q86WK7 504 aa18.91■□□□□ 0.62
SPARC-203ENST00000521327 AK7Q96M32 723 aa18.91■□□□□ 0.62
SPARC-203ENST00000521327 PHF14O94880 888 aa18.9■□□□□ 0.62
SPARC-203ENST00000521327 PIGBQ92521 554 aa18.9■□□□□ 0.62
SPARC-203ENST00000521327 EMILIN1Q9Y6C2 1016 aa18.9■□□□□ 0.62
SPARC-203ENST00000521327 CEP350Q5VT06 3117 aa18.9■□□□□ 0.62
SPARC-203ENST00000521327 TUBGCP6Q96RT7 1819 aa18.9■□□□□ 0.62
SPARC-203ENST00000521327 SHANK3Q9BYB0 1731 aa18.89■□□□□ 0.61
SPARC-203ENST00000521327 RGPD2P0DJD1 1756 aa18.89■□□□□ 0.61
SPARC-203ENST00000521327 PPM1GO15355 546 aaPredicted RBP18.89■□□□□ 0.61
SPARC-203ENST00000521327 CDCA8Q53HL2 280 aa18.89■□□□□ 0.61
SPARC-203ENST00000521327 ATP10DQ9P241 1426 aa18.89■□□□□ 0.61
SPARC-203ENST00000521327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.88■□□□□ 0.61
SPARC-203ENST00000521327 CARD14Q9BXL6 1004 aa18.88■□□□□ 0.61
SPARC-203ENST00000521327 GPBP1L1Q9HC44 474 aaPredicted RBP18.88■□□□□ 0.61
SPARC-203ENST00000521327 WWC3Q9ULE0 1092 aa18.88■□□□□ 0.61
SPARC-203ENST00000521327 KIF24Q5T7B8 1368 aa18.88■□□□□ 0.61
SPARC-203ENST00000521327 NKX1-1Q15270 411 aaPredicted RBP18.86■□□□□ 0.61
SPARC-203ENST00000521327 ZNF526Q8TF50 670 aaPredicted RBP18.86■□□□□ 0.61
SPARC-203ENST00000521327 SPG7Q9UQ90 795 aa18.86■□□□□ 0.61
SPARC-203ENST00000521327 LOC102724428A0A0B4J2F2 783 aa18.85■□□□□ 0.61
SPARC-203ENST00000521327 SIK1P57059 783 aa18.85■□□□□ 0.61
SPARC-203ENST00000521327 IGSF1Q8N6C5 1336 aa18.84■□□□□ 0.61
SPARC-203ENST00000521327 LINC00116Q8NCU8 138 aa18.84■□□□□ 0.61
SPARC-203ENST00000521327 SSFA2P28290 1259 aa18.83■□□□□ 0.6
SPARC-203ENST00000521327 TMOD3Q9NYL9 352 aa18.83■□□□□ 0.6
SPARC-203ENST00000521327 EYA1Q99502 592 aa18.82■□□□□ 0.6
SPARC-203ENST00000521327 ASAP1Q9ULH1 1129 aa18.82■□□□□ 0.6
SPARC-203ENST00000521327 NSD3Q9BZ95 1437 aa18.82■□□□□ 0.6
SPARC-203ENST00000521327 WASHC2AQ641Q2 1341 aa18.81■□□□□ 0.6
SPARC-203ENST00000521327 GNPATO15228 680 aa18.81■□□□□ 0.6
SPARC-203ENST00000521327 ATP6V1AP38606 617 aa18.81■□□□□ 0.6
SPARC-203ENST00000521327 ITPK1Q13572 414 aa18.81■□□□□ 0.6
SPARC-203ENST00000521327 IFFO2Q5TF58 517 aa18.81■□□□□ 0.6
SPARC-203ENST00000521327 C5P01031 1676 aa18.8■□□□□ 0.6
SPARC-203ENST00000521327 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.8■□□□□ 0.6
SPARC-203ENST00000521327 PHKG2P15735 406 aa18.79■□□□□ 0.6
SPARC-203ENST00000521327 IFNL2Q8IZJ0 200 aa18.79■□□□□ 0.6
SPARC-203ENST00000521327 ADCY9O60503 1353 aa18.79■□□□□ 0.6
SPARC-203ENST00000521327 C4BP0C0L5 1744 aa18.78■□□□□ 0.6
SPARC-203ENST00000521327 ATG3Q9NT62 314 aa18.78■□□□□ 0.6
SPARC-203ENST00000521327 POLKQ9UBT6 870 aa18.78■□□□□ 0.6
SPARC-203ENST00000521327 NCAPD2Q15021 1401 aa18.77■□□□□ 0.6
SPARC-203ENST00000521327 MMP10P09238 476 aa18.77■□□□□ 0.6
SPARC-203ENST00000521327 HSPA6P17066 643 aa18.77■□□□□ 0.6
SPARC-203ENST00000521327 TNNT2P45379 298 aaPredicted RBP18.75■□□□□ 0.59
SPARC-203ENST00000521327 TOGARAM1Q9Y4F4 1720 aa18.74■□□□□ 0.59
SPARC-203ENST00000521327 EIF4A2Q14240 407 aaKnown RBP18.74■□□□□ 0.59
SPARC-203ENST00000521327 TRAPPC3LQ5T215 181 aa18.74■□□□□ 0.59
SPARC-203ENST00000521327 POLR3GLQ9BT43 218 aa18.73■□□□□ 0.59
SPARC-203ENST00000521327 RTCBQ9Y3I0 505 aaKnown RBP18.73■□□□□ 0.59
SPARC-203ENST00000521327 TAF1LQ8IZX4 1826 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms