RNA–Protein interactions for RNA: ENST00000521250.5

PTK2-230, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-230ENST00000521250 FAM98CQ17RN3 349 aaKnown RBP12.63□□□□□ -0.39
PTK2-230ENST00000521250 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.63□□□□□ -0.392e-7■■■□□ 15.2
PTK2-230ENST00000521250 SPG7Q9UQ90 795 aa12.63□□□□□ -0.39
PTK2-230ENST00000521250 PLEKHG2Q9H7P9 1386 aa12.63□□□□□ -0.39
PTK2-230ENST00000521250 EXOC5O00471 708 aa12.62□□□□□ -0.39
PTK2-230ENST00000521250 ONECUT3O60422 494 aaPredicted RBP12.62□□□□□ -0.39
PTK2-230ENST00000521250 RXRBP28702 533 aa12.62□□□□□ -0.39
PTK2-230ENST00000521250 ZCRB1Q8TBF4 217 aaKnown RBP12.62□□□□□ -0.39
PTK2-230ENST00000521250 PHACTR3Q96KR7 559 aa12.62□□□□□ -0.39
PTK2-230ENST00000521250 DISP2A7MBM2 1401 aa12.62□□□□□ -0.39
PTK2-230ENST00000521250 POTEAQ6S8J7 498 aa12.61□□□□□ -0.39
PTK2-230ENST00000521250 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
PTK2-230ENST00000521250 MEGF6O75095 1541 aa12.61□□□□□ -0.39
PTK2-230ENST00000521250 OVOS2A0A0G2JMS6 1433 aa12.61□□□□□ -0.39
PTK2-230ENST00000521250 A0A0G2JS52 829 aa12.6□□□□□ -0.39
PTK2-230ENST00000521250 APAF1O14727 1248 aa12.6□□□□□ -0.39
PTK2-230ENST00000521250 MYT1Q01538 1121 aa12.6□□□□□ -0.39
PTK2-230ENST00000521250 DDB1Q16531 1140 aa12.6□□□□□ -0.39
PTK2-230ENST00000521250 MTHFSDQ2M296 383 aaKnown RBP12.6□□□□□ -0.39
PTK2-230ENST00000521250 GLI3P10071 1580 aa12.6□□□□□ -0.39
PTK2-230ENST00000521250 NFE2L2Q16236 605 aa12.59□□□□□ -0.39
PTK2-230ENST00000521250 ZNF530Q6P9A1 599 aaPredicted RBP12.59□□□□□ -0.39
PTK2-230ENST00000521250 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.4
PTK2-230ENST00000521250 C1orf141Q5JVX7 400 aa12.58□□□□□ -0.4
PTK2-230ENST00000521250 SEPT12Q8IYM1 358 aa12.58□□□□□ -0.4
PTK2-230ENST00000521250 IFNL2Q8IZJ0 200 aa12.58□□□□□ -0.4
PTK2-230ENST00000521250 RIPK4P57078 832 aa12.57□□□□□ -0.4
PTK2-230ENST00000521250 AKAP4Q5JQC9 854 aa12.57□□□□□ -0.4
PTK2-230ENST00000521250 NGEFQ8N5V2 710 aa12.57□□□□□ -0.4
PTK2-230ENST00000521250 DDX54Q8TDD1 881 aaKnown RBP12.57□□□□□ -0.4
PTK2-230ENST00000521250 PCDH11XQ9BZA7 1347 aa12.57□□□□□ -0.4
PTK2-230ENST00000521250 PCDH11YQ9BZA8 1340 aa12.57□□□□□ -0.4
PTK2-230ENST00000521250 GNAT3A8MTJ3 354 aa12.56□□□□□ -0.4
PTK2-230ENST00000521250 CYP27B1O15528 508 aa12.56□□□□□ -0.4
PTK2-230ENST00000521250 PHKG2P15735 406 aa12.56□□□□□ -0.4
PTK2-230ENST00000521250 PDE3BQ13370 1112 aa12.56□□□□□ -0.4
PTK2-230ENST00000521250 NEUROD2Q15784 382 aa12.56□□□□□ -0.4
PTK2-230ENST00000521250 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
PTK2-230ENST00000521250 RRP7AQ9Y3A4 280 aaKnown RBP12.56□□□□□ -0.4
PTK2-230ENST00000521250 PARP4Q9UKK3 1724 aaKnown RBP12.56□□□□□ -0.4
PTK2-230ENST00000521250 TNS2Q63HR2 1409 aa12.55□□□□□ -0.4
PTK2-230ENST00000521250 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
PTK2-230ENST00000521250 HSP90AB1P08238 724 aaKnown RBP12.55□□□□□ -0.4
PTK2-230ENST00000521250 LMOD3Q0VAK6 560 aa12.55□□□□□ -0.4
PTK2-230ENST00000521250 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
PTK2-230ENST00000521250 NKX1-1Q15270 411 aaPredicted RBP12.54□□□□□ -0.4
PTK2-230ENST00000521250 THSD7AQ9UPZ6 1657 aa12.54□□□□□ -0.4
PTK2-230ENST00000521250 MAP3K5Q99683 1374 aa12.54□□□□□ -0.4
PTK2-230ENST00000521250 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
PTK2-230ENST00000521250 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
PTK2-230ENST00000521250 HNRNPUQ00839 825 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTK2-230ENST00000521250 CCDC27Q2M243 656 aa12.53□□□□□ -0.4
PTK2-230ENST00000521250 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
PTK2-230ENST00000521250 MARCH10Q8NA82 808 aaPredicted RBP12.53□□□□□ -0.4
PTK2-230ENST00000521250 DCAF5Q96JK2 942 aa12.53□□□□□ -0.4
PTK2-230ENST00000521250 SALL2Q9Y467 1007 aaPredicted RBP12.53□□□□□ -0.4
PTK2-230ENST00000521250 PKD1L3Q7Z443 1732 aa12.53□□□□□ -0.4
PTK2-230ENST00000521250 RNMTO43148 476 aaKnown RBP12.52□□□□□ -0.41
PTK2-230ENST00000521250 MPRIPQ6WCQ1 1025 aa12.52□□□□□ -0.41
PTK2-230ENST00000521250 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.41
PTK2-230ENST00000521250 IL17REQ8NFR9 667 aa12.51□□□□□ -0.41
PTK2-230ENST00000521250 LGR6Q9HBX8 967 aa12.51□□□□□ -0.41
PTK2-230ENST00000521250 LRRC37A3O60309 1634 aa12.51□□□□□ -0.41
PTK2-230ENST00000521250 DCTN1Q14203 1278 aa12.5□□□□□ -0.41
PTK2-230ENST00000521250 MCM10Q7L590 875 aa12.5□□□□□ -0.41
PTK2-230ENST00000521250 WWC1Q8IX03 1113 aa12.5□□□□□ -0.41
PTK2-230ENST00000521250 RGS12O14924 1447 aa12.5□□□□□ -0.41
PTK2-230ENST00000521250 ERVV-2B6SEH9 535 aa12.49□□□□□ -0.41
PTK2-230ENST00000521250 CALD1Q05682 793 aaKnown RBP12.49□□□□□ -0.41
PTK2-230ENST00000521250 YTHDC1Q96MU7 727 aaKnown RBP12.49□□□□□ -0.41
PTK2-230ENST00000521250 CEMIPQ8WUJ3 1361 aa12.48□□□□□ -0.41
PTK2-230ENST00000521250 CABP4P57796 275 aa12.48□□□□□ -0.41
PTK2-230ENST00000521250 TEFQ10587 303 aa12.48□□□□□ -0.41
PTK2-230ENST00000521250 FAM196AQ6ZSG2 479 aa12.48□□□□□ -0.41
PTK2-230ENST00000521250 WDR63Q8IWG1 891 aa12.48□□□□□ -0.41
PTK2-230ENST00000521250 THUMPD2Q9BTF0 503 aaKnown RBP12.48□□□□□ -0.41
PTK2-230ENST00000521250 SHANK3Q9BYB0 1731 aa12.48□□□□□ -0.41
PTK2-230ENST00000521250 BCL9O00512 1426 aa12.47□□□□□ -0.41
PTK2-230ENST00000521250 KDM6AO15550 1401 aaPredicted RBP12.47□□□□□ -0.41
PTK2-230ENST00000521250 FAM182BQ5T319 152 aa12.47□□□□□ -0.41
PTK2-230ENST00000521250 SLC52A2Q9HAB3 445 aa12.47□□□□□ -0.41
PTK2-230ENST00000521250 IL16Q14005 1332 aa12.46□□□□□ -0.41
PTK2-230ENST00000521250 ZBED9Q6R2W3 1325 aa12.46□□□□□ -0.41
PTK2-230ENST00000521250 ZNF521Q96K83 1311 aa12.46□□□□□ -0.41
PTK2-230ENST00000521250 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
PTK2-230ENST00000521250 TAF7Q15545 349 aaPredicted RBP12.46□□□□□ -0.41
PTK2-230ENST00000521250 DLG5Q8TDM6 1919 aa12.45□□□□□ -0.42
PTK2-230ENST00000521250 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
PTK2-230ENST00000521250 NFATC2IPQ8NCF5 419 aa12.45□□□□□ -0.42
PTK2-230ENST00000521250 SYTL4Q96C24 671 aaPredicted RBP12.45□□□□□ -0.42
PTK2-230ENST00000521250 ACSBG1Q96GR2 724 aa12.45□□□□□ -0.42
PTK2-230ENST00000521250 TMOD3Q9NYL9 352 aa12.45□□□□□ -0.42
PTK2-230ENST00000521250 GNAI1P63096 354 aa12.44□□□□□ -0.42
PTK2-230ENST00000521250 CFAP44Q96MT7 982 aa12.44□□□□□ -0.42
PTK2-230ENST00000521250 IFT57Q9NWB7 429 aa12.44□□□□□ -0.42
PTK2-230ENST00000521250 BABAM1Q9NWV8 329 aa12.44□□□□□ -0.42
PTK2-230ENST00000521250 LAS1LQ9Y4W2 734 aaKnown RBP12.44□□□□□ -0.42
PTK2-230ENST00000521250 BRWD3Q6RI45 1802 aa12.44□□□□□ -0.42
PTK2-230ENST00000521250 ADAMTS7Q9UKP4 1686 aa12.43□□□□□ -0.42
PTK2-230ENST00000521250 BTBD11A6QL63 1104 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms