RNA–Protein interactions for RNA: ENST00000521170.5

BRF2-203, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4 BASIC

Gene BRF2, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-203ENST00000521170 USHBP1Q8N6Y0 703 aa14.53□□□□□ -0.08
BRF2-203ENST00000521170 MEGF6O75095 1541 aa14.52□□□□□ -0.08
BRF2-203ENST00000521170 NEFMP07197 916 aa14.52□□□□□ -0.09
BRF2-203ENST00000521170 U2AF1L5P0DN76 240 aaPredicted RBP14.52□□□□□ -0.09
BRF2-203ENST00000521170 U2AF1Q01081 240 aaKnown RBP eCLIP14.52□□□□□ -0.09
BRF2-203ENST00000521170 WDR43Q15061 677 aaKnown RBP eCLIP14.52□□□□□ -0.09
BRF2-203ENST00000521170 AMOTQ4VCS5 1084 aa14.52□□□□□ -0.09
BRF2-203ENST00000521170 KRT27Q7Z3Y8 459 aa14.52□□□□□ -0.09
BRF2-203ENST00000521170 SPG7Q9UQ90 795 aa14.52□□□□□ -0.09
BRF2-203ENST00000521170 PCDH11XQ9BZA7 1347 aa14.51□□□□□ -0.09
BRF2-203ENST00000521170 PCDH11YQ9BZA8 1340 aa14.51□□□□□ -0.09
BRF2-203ENST00000521170 ZCRB1Q8TBF4 217 aaKnown RBP14.51□□□□□ -0.09
BRF2-203ENST00000521170 PKD1L3Q7Z443 1732 aa14.5□□□□□ -0.09
BRF2-203ENST00000521170 FCHSD2O94868 740 aa14.5□□□□□ -0.09
BRF2-203ENST00000521170 PLEKHO1Q53GL0 409 aaPredicted RBP14.5□□□□□ -0.09
BRF2-203ENST00000521170 HMOX1P09601 288 aa14.49□□□□□ -0.09
BRF2-203ENST00000521170 MRS2Q9HD23 443 aa14.49□□□□□ -0.09
BRF2-203ENST00000521170 AEBP1Q8IUX7 1158 aa14.48□□□□□ -0.09
BRF2-203ENST00000521170 BCL9O00512 1426 aa14.48□□□□□ -0.09
BRF2-203ENST00000521170 BRWD3Q6RI45 1802 aa14.48□□□□□ -0.09
BRF2-203ENST00000521170 CCER2I3L3R5 266 aa14.47□□□□□ -0.09
BRF2-203ENST00000521170 HSP90AB1P08238 724 aaKnown RBP14.47□□□□□ -0.09
BRF2-203ENST00000521170 FAM196AQ6ZSG2 479 aa14.47□□□□□ -0.09
BRF2-203ENST00000521170 RSPH6AQ9H0K4 717 aa14.47□□□□□ -0.09
BRF2-203ENST00000521170 C1orf141Q5JVX7 400 aa14.46□□□□□ -0.09
BRF2-203ENST00000521170 GAS2L2Q8NHY3 880 aa14.46□□□□□ -0.09
BRF2-203ENST00000521170 MAPK8IP3Q9UPT6 1336 aa14.45□□□□□ -0.1
BRF2-203ENST00000521170 PRKAR2BP31323 418 aa14.45□□□□□ -0.1
BRF2-203ENST00000521170 IFNL2Q8IZJ0 200 aa14.45□□□□□ -0.1
BRF2-203ENST00000521170 UPF1Q92900 1129 aaKnown RBP eCLIP14.45□□□□□ -0.1
BRF2-203ENST00000521170 ZNF530Q6P9A1 599 aaPredicted RBP14.44□□□□□ -0.1
BRF2-203ENST00000521170 MARCH10Q8NA82 808 aaPredicted RBP14.44□□□□□ -0.1
BRF2-203ENST00000521170 DDX54Q8TDD1 881 aaKnown RBP14.44□□□□□ -0.1
BRF2-203ENST00000521170 SHANK3Q9BYB0 1731 aa14.44□□□□□ -0.1
BRF2-203ENST00000521170 CCDC125Q86Z20 511 aa14.43□□□□□ -0.1
BRF2-203ENST00000521170 PHKG2P15735 406 aa14.42□□□□□ -0.1
BRF2-203ENST00000521170 NKX1-1Q15270 411 aaPredicted RBP14.42□□□□□ -0.1
BRF2-203ENST00000521170 AKAP4Q5JQC9 854 aa14.42□□□□□ -0.1
BRF2-203ENST00000521170 CYP27B1O15528 508 aa14.41□□□□□ -0.1
BRF2-203ENST00000521170 PNISRQ8TF01 805 aaKnown RBP14.41□□□□□ -0.1
BRF2-203ENST00000521170 DCAF5Q96JK2 942 aa14.41□□□□□ -0.1
BRF2-203ENST00000521170 SF3B2Q13435 895 aaKnown RBP14.4□□□□□ -0.1
BRF2-203ENST00000521170 RUNDC1Q96C34 613 aa14.4□□□□□ -0.1
BRF2-203ENST00000521170 ADAMTS8Q9UP79 889 aa14.4□□□□□ -0.1
BRF2-203ENST00000521170 MAP3K5Q99683 1374 aa14.39□□□□□ -0.11
BRF2-203ENST00000521170 LMOD3Q0VAK6 560 aa14.39□□□□□ -0.11
BRF2-203ENST00000521170 MTHFSDQ2M296 383 aaKnown RBP14.39□□□□□ -0.11
BRF2-203ENST00000521170 PLEKHF1Q96S99 279 aa14.39□□□□□ -0.11
BRF2-203ENST00000521170 NHSQ6T4R5 1651 aa14.39□□□□□ -0.11
BRF2-203ENST00000521170 GNAT3A8MTJ3 354 aa14.38□□□□□ -0.11
BRF2-203ENST00000521170 HTATSF1O43719 755 aaKnown RBP14.38□□□□□ -0.11
BRF2-203ENST00000521170 RTF1Q92541 710 aaKnown RBP14.38□□□□□ -0.11
BRF2-203ENST00000521170 ERVV-2B6SEH9 535 aa14.37□□□□□ -0.11
BRF2-203ENST00000521170 NFE2L2Q16236 605 aa14.37□□□□□ -0.11
BRF2-203ENST00000521170 CCDC184Q52MB2 194 aa14.37□□□□□ -0.11
BRF2-203ENST00000521170 PHACTR3Q96KR7 559 aa14.37□□□□□ -0.11
BRF2-203ENST00000521170 BCL11BQ9C0K0 894 aaPredicted RBP14.37□□□□□ -0.11
BRF2-203ENST00000521170 DOT1LQ8TEK3 1739 aa14.36□□□□□ -0.11
BRF2-203ENST00000521170 FAM182BQ5T319 152 aa14.36□□□□□ -0.11
BRF2-203ENST00000521170 MIER1Q8N108 512 aa14.36□□□□□ -0.11
BRF2-203ENST00000521170 HMGB2P26583 209 aaKnown RBP14.35□□□□□ -0.11
BRF2-203ENST00000521170 SBF2Q86WG5 1849 aa14.35□□□□□ -0.11
BRF2-203ENST00000521170 KDM6AO15550 1401 aaPredicted RBP14.34□□□□□ -0.11
BRF2-203ENST00000521170 ADAMTS7Q9UKP4 1686 aa14.34□□□□□ -0.11
BRF2-203ENST00000521170 TRIM37O94972 964 aa14.34□□□□□ -0.11
BRF2-203ENST00000521170 NCBP3Q53F19 620 aaKnown RBP14.34□□□□□ -0.11
BRF2-203ENST00000521170 FAM9BQ8IZU0 186 aa14.34□□□□□ -0.11
BRF2-203ENST00000521170 NGEFQ8N5V2 710 aa14.34□□□□□ -0.11
BRF2-203ENST00000521170 SYTL4Q96C24 671 aaPredicted RBP14.34□□□□□ -0.11
BRF2-203ENST00000521170 TMOD3Q9NYL9 352 aa14.34□□□□□ -0.11
BRF2-203ENST00000521170 MRC1P22897 1456 aa14.33□□□□□ -0.12
BRF2-203ENST00000521170 SCN11AQ9UI33 1791 aa14.33□□□□□ -0.12
BRF2-203ENST00000521170 TMPOP42166 694 aaKnown RBP14.33□□□□□ -0.12
BRF2-203ENST00000521170 BAG6P46379 1132 aa14.33□□□□□ -0.12
BRF2-203ENST00000521170 CABP4P57796 275 aa14.33□□□□□ -0.12
BRF2-203ENST00000521170 MPRIPQ6WCQ1 1025 aa14.33□□□□□ -0.12
BRF2-203ENST00000521170 CCDC146Q8IYE0 955 aa14.33□□□□□ -0.12
BRF2-203ENST00000521170 ACSBG1Q96GR2 724 aa14.33□□□□□ -0.12
BRF2-203ENST00000521170 TNS1Q9HBL0 1735 aaKnown RBP14.32□□□□□ -0.12
BRF2-203ENST00000521170 RNMTO43148 476 aaKnown RBP14.32□□□□□ -0.12
BRF2-203ENST00000521170 PRIM1P49642 420 aaKnown RBP14.32□□□□□ -0.12
BRF2-203ENST00000521170 TEFQ10587 303 aa14.32□□□□□ -0.12
BRF2-203ENST00000521170 SMARCC1Q92922 1105 aaPredicted RBP14.32□□□□□ -0.12
BRF2-203ENST00000521170 CEMIPQ8WUJ3 1361 aa14.32□□□□□ -0.12
BRF2-203ENST00000521170 TOGARAM1Q9Y4F4 1720 aa14.32□□□□□ -0.12
BRF2-203ENST00000521170 RGPD3A6NKT7 1758 aaPredicted RBP14.32□□□□□ -0.12
BRF2-203ENST00000521170 RGPD4Q7Z3J3 1758 aa14.32□□□□□ -0.12
BRF2-203ENST00000521170 RIPK4P57078 832 aa14.31□□□□□ -0.12
BRF2-203ENST00000521170 CALD1Q05682 793 aaKnown RBP14.31□□□□□ -0.12
BRF2-203ENST00000521170 SLC52A2Q9HAB3 445 aa14.31□□□□□ -0.12
BRF2-203ENST00000521170 EP400Q96L91 3159 aa14.31□□□□□ -0.12
BRF2-203ENST00000521170 PLSCR1O15162 318 aa14.3□□□□□ -0.12
BRF2-203ENST00000521170 APBA3O96018 575 aa14.3□□□□□ -0.12
BRF2-203ENST00000521170 BTAF1O14981 1849 aa14.29□□□□□ -0.12
BRF2-203ENST00000521170 APAF1O14727 1248 aa14.29□□□□□ -0.12
BRF2-203ENST00000521170 KCNQ2O43526 872 aa14.29□□□□□ -0.12
BRF2-203ENST00000521170 ITGB4P16144 1822 aa14.29□□□□□ -0.12
BRF2-203ENST00000521170 CCDC27Q2M243 656 aa14.28□□□□□ -0.12
BRF2-203ENST00000521170 IL17REQ8NFR9 667 aa14.28□□□□□ -0.12
BRF2-203ENST00000521170 KAT6BQ8WYB5 2073 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms