RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 ANP32CO43423 234 aa16.61■□□□□ 0.25
CLK4-208ENST00000520957 UPF1Q92900 1129 aaKnown RBP eCLIP16.61■□□□□ 0.25
CLK4-208ENST00000520957 OVOS2A0A0G2JMS6 1433 aa16.6■□□□□ 0.25
CLK4-208ENST00000520957 CYP27B1O15528 508 aa16.6■□□□□ 0.25
CLK4-208ENST00000520957 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
CLK4-208ENST00000520957 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLK4-208ENST00000520957 KDRP35968 1356 aa16.59■□□□□ 0.25
CLK4-208ENST00000520957 TRIM37O94972 964 aa16.59■□□□□ 0.25
CLK4-208ENST00000520957 FAM196AQ6ZSG2 479 aa16.59■□□□□ 0.25
CLK4-208ENST00000520957 NUDCQ9Y266 331 aa16.59■□□□□ 0.25
CLK4-208ENST00000520957 TNS2Q63HR2 1409 aa16.58■□□□□ 0.25
CLK4-208ENST00000520957 LRRC37A3O60309 1634 aa16.58■□□□□ 0.24
CLK4-208ENST00000520957 KCNQ2O43526 872 aa16.58■□□□□ 0.24
CLK4-208ENST00000520957 ACSBG1Q96GR2 724 aa16.58■□□□□ 0.24
CLK4-208ENST00000520957 PHACTR3Q96KR7 559 aa16.57■□□□□ 0.24
CLK4-208ENST00000520957 PARP4Q9UKK3 1724 aaKnown RBP16.57■□□□□ 0.24
CLK4-208ENST00000520957 RSPH6AQ9H0K4 717 aa16.56■□□□□ 0.24
CLK4-208ENST00000520957 SPG7Q9UQ90 795 aa16.56■□□□□ 0.24
CLK4-208ENST00000520957 PRKAR2BP31323 418 aa16.56■□□□□ 0.24
CLK4-208ENST00000520957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.56■□□□□ 0.24
CLK4-208ENST00000520957 PLEKHO1Q53GL0 409 aaPredicted RBP16.55■□□□□ 0.24
CLK4-208ENST00000520957 RGPD1P0DJD0 1748 aa16.55■□□□□ 0.24
CLK4-208ENST00000520957 MTHFSDQ2M296 383 aaKnown RBP16.54■□□□□ 0.24
CLK4-208ENST00000520957 PHKG2P15735 406 aa16.53■□□□□ 0.24
CLK4-208ENST00000520957 ZNF530Q6P9A1 599 aaPredicted RBP16.53■□□□□ 0.24
CLK4-208ENST00000520957 PCDH11XQ9BZA7 1347 aa16.53■□□□□ 0.24
CLK4-208ENST00000520957 PCDH11YQ9BZA8 1340 aa16.53■□□□□ 0.24
CLK4-208ENST00000520957 FCHSD2O94868 740 aa16.53■□□□□ 0.24
CLK4-208ENST00000520957 PRIM1P49642 420 aaKnown RBP16.53■□□□□ 0.24
CLK4-208ENST00000520957 AMOTQ4VCS5 1084 aa16.53■□□□□ 0.24
CLK4-208ENST00000520957 DIEXFQ68CQ4 756 aaKnown RBP16.53■□□□□ 0.24
CLK4-208ENST00000520957 DEFB132Q7Z7B7 95 aa16.53■□□□□ 0.24
CLK4-208ENST00000520957 ADAMTS8Q9UP79 889 aa16.53■□□□□ 0.24
CLK4-208ENST00000520957 WNK3Q9BYP7 1800 aa16.52■□□□□ 0.24
CLK4-208ENST00000520957 IFNL2Q8IZJ0 200 aa16.52■□□□□ 0.23
CLK4-208ENST00000520957 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
CLK4-208ENST00000520957 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
CLK4-208ENST00000520957 MPRIPQ6WCQ1 1025 aa16.5■□□□□ 0.23
CLK4-208ENST00000520957 PLEKHF1Q96S99 279 aa16.5■□□□□ 0.23
CLK4-208ENST00000520957 APBA3O96018 575 aa16.5■□□□□ 0.23
CLK4-208ENST00000520957 BCL11BQ9C0K0 894 aaPredicted RBP16.5■□□□□ 0.23
CLK4-208ENST00000520957 MRS2Q9HD23 443 aa16.5■□□□□ 0.23
CLK4-208ENST00000520957 BCL9O00512 1426 aa16.49■□□□□ 0.23
CLK4-208ENST00000520957 LGR6Q9HBX8 967 aa16.49■□□□□ 0.23
CLK4-208ENST00000520957 EN1Q05925 392 aaPredicted RBP16.48■□□□□ 0.23
CLK4-208ENST00000520957 CCDC125Q86Z20 511 aa16.48■□□□□ 0.23
CLK4-208ENST00000520957 CCDC146Q8IYE0 955 aa16.48■□□□□ 0.23
CLK4-208ENST00000520957 WDR43Q15061 677 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLK4-208ENST00000520957 C1orf141Q5JVX7 400 aa16.47■□□□□ 0.23
CLK4-208ENST00000520957 PNISRQ8TF01 805 aaKnown RBP16.47■□□□□ 0.23
CLK4-208ENST00000520957 SHANK3Q9BYB0 1731 aa16.47■□□□□ 0.23
CLK4-208ENST00000520957 SF3B2Q13435 895 aaKnown RBP16.46■□□□□ 0.23
CLK4-208ENST00000520957 AKAP4Q5JQC9 854 aa16.46■□□□□ 0.23
CLK4-208ENST00000520957 MIER1Q8N108 512 aa16.46■□□□□ 0.23
CLK4-208ENST00000520957 SENP3-EIF4A1A0A087X0R7 540 aa16.45■□□□□ 0.22
CLK4-208ENST00000520957 PIGBQ92521 554 aa16.45■□□□□ 0.22
CLK4-208ENST00000520957 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
CLK4-208ENST00000520957 EZH2Q15910 746 aaKnown RBP16.44■□□□□ 0.22
CLK4-208ENST00000520957 PROM2Q8N271 834 aa16.44■□□□□ 0.22
CLK4-208ENST00000520957 IL17REQ8NFR9 667 aa16.44■□□□□ 0.22
CLK4-208ENST00000520957 GAS2L2Q8NHY3 880 aa16.44■□□□□ 0.22
CLK4-208ENST00000520957 PKD1L3Q7Z443 1732 aa16.44■□□□□ 0.22
CLK4-208ENST00000520957 PLEKHG2Q9H7P9 1386 aa16.44■□□□□ 0.22
CLK4-208ENST00000520957 KDM6AO15550 1401 aaPredicted RBP16.43■□□□□ 0.22
CLK4-208ENST00000520957 CAMKK2Q96RR4 588 aa16.43■□□□□ 0.22
CLK4-208ENST00000520957 RNMTO43148 476 aaKnown RBP16.43■□□□□ 0.22
CLK4-208ENST00000520957 HSP90AB1P08238 724 aaKnown RBP16.43■□□□□ 0.22
CLK4-208ENST00000520957 DCTN1Q14203 1278 aa16.43■□□□□ 0.22
CLK4-208ENST00000520957 NFATC2IPQ8NCF5 419 aa16.43■□□□□ 0.22
CLK4-208ENST00000520957 RRP7AQ9Y3A4 280 aaKnown RBP16.43■□□□□ 0.22
CLK4-208ENST00000520957 GNAT3A8MTJ3 354 aa16.42■□□□□ 0.22
CLK4-208ENST00000520957 BAG6P46379 1132 aa16.42■□□□□ 0.22
CLK4-208ENST00000520957 KCNQ4P56696 695 aa16.41■□□□□ 0.22
CLK4-208ENST00000520957 MCM10Q7L590 875 aa16.41■□□□□ 0.22
CLK4-208ENST00000520957 ERVV-2B6SEH9 535 aa16.4■□□□□ 0.22
CLK4-208ENST00000520957 CABP4P57796 275 aa16.4■□□□□ 0.22
CLK4-208ENST00000520957 NEUROD2Q15784 382 aa16.4■□□□□ 0.22
CLK4-208ENST00000520957 FAM9BQ8IZU0 186 aa16.4■□□□□ 0.22
CLK4-208ENST00000520957 RUNDC1Q96C34 613 aa16.4■□□□□ 0.22
CLK4-208ENST00000520957 TMOD3Q9NYL9 352 aa16.4■□□□□ 0.22
CLK4-208ENST00000520957 ASAP1Q9ULH1 1129 aa16.4■□□□□ 0.22
CLK4-208ENST00000520957 MAP3K5Q99683 1374 aa16.4■□□□□ 0.22
CLK4-208ENST00000520957 PLSCR1O15162 318 aa16.4■□□□□ 0.22
CLK4-208ENST00000520957 NFE2L2Q16236 605 aa16.4■□□□□ 0.22
CLK4-208ENST00000520957 PNNQ9H307 717 aaKnown RBP16.4■□□□□ 0.22
CLK4-208ENST00000520957 KAT6BQ8WYB5 2073 aa16.39■□□□□ 0.21
CLK4-208ENST00000520957 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
CLK4-208ENST00000520957 NEFMP07197 916 aa16.39■□□□□ 0.21
CLK4-208ENST00000520957 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
CLK4-208ENST00000520957 TMPOP42166 694 aaKnown RBP16.38■□□□□ 0.21
CLK4-208ENST00000520957 RIPK4P57078 832 aa16.38■□□□□ 0.21
CLK4-208ENST00000520957 ATG3Q9NT62 314 aa16.38■□□□□ 0.21
CLK4-208ENST00000520957 SBF2Q86WG5 1849 aa16.38■□□□□ 0.21
CLK4-208ENST00000520957 APAF1O14727 1248 aa16.37■□□□□ 0.21
CLK4-208ENST00000520957 SLC52A2Q9HAB3 445 aa16.37■□□□□ 0.21
CLK4-208ENST00000520957 LRRC4BQ9NT99 713 aa16.37■□□□□ 0.21
CLK4-208ENST00000520957 TOGARAM1Q9Y4F4 1720 aa16.37■□□□□ 0.21
CLK4-208ENST00000520957 TXNRD1Q16881 649 aa16.37■□□□□ 0.21
CLK4-208ENST00000520957 SLC39A6Q13433 755 aa16.36■□□□□ 0.21
CLK4-208ENST00000520957 RTF1Q92541 710 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms