RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 PTGER2P43116 358 aa24.79■■□□□ 1.56
VEGFA-222ENST00000520948 PAPPAQ13219 1627 aa24.78■■□□□ 1.56
VEGFA-222ENST00000520948 FAM208AQ9UK61 1670 aaKnown RBP24.78■■□□□ 1.56
VEGFA-222ENST00000520948 DDX10Q13206 875 aaKnown RBP24.77■■□□□ 1.56
VEGFA-222ENST00000520948 LTV1Q96GA3 475 aaPredicted RBP24.77■■□□□ 1.56
VEGFA-222ENST00000520948 RGPD2P0DJD1 1756 aa24.74■■□□□ 1.55
VEGFA-222ENST00000520948 MAP3K19Q56UN5 1328 aa24.73■■□□□ 1.55
VEGFA-222ENST00000520948 IP6K1Q92551 441 aa24.73■■□□□ 1.55
VEGFA-222ENST00000520948 MORC1Q86VD1 984 aa24.72■■□□□ 1.55
VEGFA-222ENST00000520948 DDX54Q8TDD1 881 aaKnown RBP24.72■■□□□ 1.55
VEGFA-222ENST00000520948 MTFR1LQ9H019 292 aa24.72■■□□□ 1.55
VEGFA-222ENST00000520948 MAP2P11137 1827 aaKnown RBP24.72■■□□□ 1.55
VEGFA-222ENST00000520948 RRS1Q15050 365 aaKnown RBP24.71■■□□□ 1.55
VEGFA-222ENST00000520948 DOT1LQ8TEK3 1739 aa24.7■■□□□ 1.54
VEGFA-222ENST00000520948 CC2D1BQ5T0F9 858 aaKnown RBP24.7■■□□□ 1.54
VEGFA-222ENST00000520948 FHDC1Q9C0D6 1143 aaPredicted RBP24.7■■□□□ 1.54
VEGFA-222ENST00000520948 ZNF827Q17R98 1081 aa24.69■■□□□ 1.54
VEGFA-222ENST00000520948 LRRC4BQ9NT99 713 aa24.69■■□□□ 1.54
VEGFA-222ENST00000520948 POLKQ9UBT6 870 aa24.69■■□□□ 1.54
VEGFA-222ENST00000520948 SHANK3Q9BYB0 1731 aa24.68■■□□□ 1.54
VEGFA-222ENST00000520948 KIF24Q5T7B8 1368 aa24.67■■□□□ 1.54
VEGFA-222ENST00000520948 HOXC9P31274 260 aa24.67■■□□□ 1.54
VEGFA-222ENST00000520948 SGIP1Q9BQI5 828 aa24.67■■□□□ 1.54
VEGFA-222ENST00000520948 EMILIN1Q9Y6C2 1016 aa24.67■■□□□ 1.54
VEGFA-222ENST00000520948 TNNT2P45379 298 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-222ENST00000520948 AMPHP49418 695 aa24.66■■□□□ 1.54
VEGFA-222ENST00000520948 SYT17Q9BSW7 474 aa24.66■■□□□ 1.54
VEGFA-222ENST00000520948 RTL1A6NKG5 1358 aa24.66■■□□□ 1.54
VEGFA-222ENST00000520948 TUBGCP6Q96RT7 1819 aa24.64■■□□□ 1.54
VEGFA-222ENST00000520948 SYTL4Q96C24 671 aaPredicted RBP24.64■■□□□ 1.54
VEGFA-222ENST00000520948 MEGF6O75095 1541 aa24.63■■□□□ 1.53
VEGFA-222ENST00000520948 QSER1Q2KHR3 1735 aa24.63■■□□□ 1.53
VEGFA-222ENST00000520948 SMG6Q86US8 1419 aaKnown RBP24.62■■□□□ 1.53
VEGFA-222ENST00000520948 KCNQ4P56696 695 aa24.62■■□□□ 1.53
VEGFA-222ENST00000520948 ARXQ96QS3 562 aa24.62■■□□□ 1.53
VEGFA-222ENST00000520948 FLT4P35916 1363 aa24.62■■□□□ 1.53
VEGFA-222ENST00000520948 INSRP06213 1382 aa24.61■■□□□ 1.53
VEGFA-222ENST00000520948 LY75O60449 1722 aa24.61■■□□□ 1.53
VEGFA-222ENST00000520948 PRIM1P49642 420 aaKnown RBP24.6■■□□□ 1.53
VEGFA-222ENST00000520948 HSP90AB2PQ58FF8 381 aa24.6■■□□□ 1.53
VEGFA-222ENST00000520948 AKT1S1Q96B36 256 aa24.6■■□□□ 1.53
VEGFA-222ENST00000520948 SLC27A3Q5K4L6 730 aa24.59■■□□□ 1.53
VEGFA-222ENST00000520948 CNGB1Q14028 1251 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-222ENST00000520948 USHBP1Q8N6Y0 703 aa24.58■■□□□ 1.53
VEGFA-222ENST00000520948 ZCRB1Q8TBF4 217 aaKnown RBP24.58■■□□□ 1.53
VEGFA-222ENST00000520948 PPM1GO15355 546 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-222ENST00000520948 CHD4Q14839 1912 aa24.56■■□□□ 1.52
VEGFA-222ENST00000520948 PNPLA7Q6ZV29 1317 aa24.56■■□□□ 1.52
VEGFA-222ENST00000520948 UTRNP46939 3433 aa24.55■■□□□ 1.52
VEGFA-222ENST00000520948 MTHFSP49914 203 aa24.55■■□□□ 1.52
VEGFA-222ENST00000520948 NBPF6Q5VWK0 638 aa24.55■■□□□ 1.52
VEGFA-222ENST00000520948 KLHL34Q8N239 644 aa24.55■■□□□ 1.52
VEGFA-222ENST00000520948 NBPF4Q96M43 638 aa24.55■■□□□ 1.52
VEGFA-222ENST00000520948 TFCP2L1Q9NZI6 479 aa24.54■■□□□ 1.52
VEGFA-222ENST00000520948 COL24A1Q17RW2 1714 aa24.54■■□□□ 1.52
VEGFA-222ENST00000520948 MAP3K5Q99683 1374 aa24.54■■□□□ 1.52
VEGFA-222ENST00000520948 PPP2R1AP30153 589 aa24.52■■□□□ 1.52
VEGFA-222ENST00000520948 ZNF784Q8NCA9 323 aaPredicted RBP24.52■■□□□ 1.52
VEGFA-222ENST00000520948 RALBP1Q15311 655 aa24.51■■□□□ 1.51
VEGFA-222ENST00000520948 SLC16A10Q8TF71 515 aa24.5■■□□□ 1.51
VEGFA-222ENST00000520948 RAPGEF4Q8WZA2 1011 aa24.5■■□□□ 1.51
VEGFA-222ENST00000520948 CCNL1Q9UK58 526 aaPredicted RBP24.5■■□□□ 1.51
VEGFA-222ENST00000520948 POLD1P28340 1107 aa24.49■■□□□ 1.51
VEGFA-222ENST00000520948 EIF4A2Q14240 407 aaKnown RBP24.49■■□□□ 1.51
VEGFA-222ENST00000520948 C5P01031 1676 aa24.47■■□□□ 1.51
VEGFA-222ENST00000520948 GPR162Q16538 588 aa24.47■■□□□ 1.51
VEGFA-222ENST00000520948 PRKRIP1Q9H875 184 aaPredicted RBP24.47■■□□□ 1.51
VEGFA-222ENST00000520948 TATP17735 454 aaPredicted RBP24.46■■□□□ 1.51
VEGFA-222ENST00000520948 NCAPD2Q15021 1401 aa24.45■■□□□ 1.51
VEGFA-222ENST00000520948 MSH5O43196 834 aa24.45■■□□□ 1.5
VEGFA-222ENST00000520948 IL13P35225 146 aa24.45■■□□□ 1.5
VEGFA-222ENST00000520948 PELP1Q8IZL8 1130 aaKnown RBP24.45■■□□□ 1.5
VEGFA-222ENST00000520948 EYA1Q99502 592 aa24.45■■□□□ 1.5
VEGFA-222ENST00000520948 COL3A1P02461 1466 aaPredicted RBP24.45■■□□□ 1.5
VEGFA-222ENST00000520948 TOGARAM1Q9Y4F4 1720 aa24.44■■□□□ 1.5
VEGFA-222ENST00000520948 PCDH11XQ9BZA7 1347 aa24.43■■□□□ 1.5
VEGFA-222ENST00000520948 PCDH11YQ9BZA8 1340 aa24.43■■□□□ 1.5
VEGFA-222ENST00000520948 NLGN2Q8NFZ4 835 aa24.43■■□□□ 1.5
VEGFA-222ENST00000520948 ITGB4P16144 1822 aa24.42■■□□□ 1.5
VEGFA-222ENST00000520948 TAF1LQ8IZX4 1826 aa24.42■■□□□ 1.5
VEGFA-222ENST00000520948 COL23A1Q86Y22 540 aaPredicted RBP24.41■■□□□ 1.5
VEGFA-222ENST00000520948 PKD1L3Q7Z443 1732 aa24.41■■□□□ 1.5
VEGFA-222ENST00000520948 IGSF1Q8N6C5 1336 aa24.4■■□□□ 1.5
VEGFA-222ENST00000520948 MSL1Q68DK7 614 aa24.4■■□□□ 1.5
VEGFA-222ENST00000520948 MYBBP1AQ9BQG0 1328 aaKnown RBP24.39■■□□□ 1.5
VEGFA-222ENST00000520948 DIAPH1O60610 1272 aaKnown RBP24.39■■□□□ 1.49
VEGFA-222ENST00000520948 MPRIPQ6WCQ1 1025 aa24.39■■□□□ 1.49
VEGFA-222ENST00000520948 PALLDQ8WX93 1383 aa24.39■■□□□ 1.49
VEGFA-222ENST00000520948 CYP27B1O15528 508 aa24.38■■□□□ 1.49
VEGFA-222ENST00000520948 CFAP53Q96M91 514 aa24.36■■□□□ 1.49
VEGFA-222ENST00000520948 C4BP0C0L5 1744 aa24.35■■□□□ 1.49
VEGFA-222ENST00000520948 GOLGB1Q14789 3259 aaKnown RBP24.34■■□□□ 1.49
VEGFA-222ENST00000520948 KDRP35968 1356 aa24.33■■□□□ 1.49
VEGFA-222ENST00000520948 YBX3P16989 372 aaKnown RBP eCLIP24.31■■□□□ 1.48
VEGFA-222ENST00000520948 ANP32CO43423 234 aa24.3■■□□□ 1.48
VEGFA-222ENST00000520948 AEBP1Q8IUX7 1158 aa24.3■■□□□ 1.48
VEGFA-222ENST00000520948 UBR3Q6ZT12 1888 aa24.3■■□□□ 1.48
VEGFA-222ENST00000520948 SULT6B1Q6IMI4 303 aa24.29■■□□□ 1.48
VEGFA-222ENST00000520948 PIGBQ92521 554 aa24.29■■□□□ 1.48
VEGFA-222ENST00000520948 PLEKHG2Q9H7P9 1386 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms