RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 KCNQ2O43526 872 aa14.86□□□□□ -0.03
PVT1-209ENST00000520913 POLR3GLQ9BT43 218 aa14.86□□□□□ -0.03
PVT1-209ENST00000520913 ANO8Q9HCE9 1232 aaPredicted RBP14.86□□□□□ -0.03
PVT1-209ENST00000520913 NCAPD2Q15021 1401 aa14.85□□□□□ -0.03
PVT1-209ENST00000520913 TXNRD1Q16881 649 aa14.85□□□□□ -0.03
PVT1-209ENST00000520913 TAF1LQ8IZX4 1826 aa14.85□□□□□ -0.03
PVT1-209ENST00000520913 C5P01031 1676 aa14.84□□□□□ -0.03
PVT1-209ENST00000520913 NBPF6Q5VWK0 638 aa14.83□□□□□ -0.04
PVT1-209ENST00000520913 PROM2Q8N271 834 aa14.83□□□□□ -0.04
PVT1-209ENST00000520913 DDX54Q8TDD1 881 aaKnown RBP14.83□□□□□ -0.04
PVT1-209ENST00000520913 RAPGEF4Q8WZA2 1011 aa14.83□□□□□ -0.04
PVT1-209ENST00000520913 NBPF4Q96M43 638 aa14.83□□□□□ -0.04
PVT1-209ENST00000520913 EMILIN1Q9Y6C2 1016 aa14.83□□□□□ -0.04
PVT1-209ENST00000520913 NSD2O96028 1365 aa14.83□□□□□ -0.04
PVT1-209ENST00000520913 HSP90AB2PQ58FF8 381 aa14.82□□□□□ -0.04
PVT1-209ENST00000520913 USHBP1Q8N6Y0 703 aa14.82□□□□□ -0.04
PVT1-209ENST00000520913 ZCRB1Q8TBF4 217 aaKnown RBP14.82□□□□□ -0.04
PVT1-209ENST00000520913 STK32BQ9NY57 414 aa14.82□□□□□ -0.04
PVT1-209ENST00000520913 COL24A1Q17RW2 1714 aa14.82□□□□□ -0.04
PVT1-209ENST00000520913 TATP17735 454 aaPredicted RBP14.81□□□□□ -0.04
PVT1-209ENST00000520913 SPON1Q9HCB6 807 aa14.81□□□□□ -0.04
PVT1-209ENST00000520913 PCDH11XQ9BZA7 1347 aa14.81□□□□□ -0.04
PVT1-209ENST00000520913 PCDH11YQ9BZA8 1340 aa14.81□□□□□ -0.04
PVT1-209ENST00000520913 SLC15A2Q16348 729 aa14.79□□□□□ -0.04
PVT1-209ENST00000520913 VIRMAQ69YN4 1812 aaKnown RBP14.79□□□□□ -0.04
PVT1-209ENST00000520913 WASHC2AQ641Q2 1341 aa14.78□□□□□ -0.04
PVT1-209ENST00000520913 PPM1GO15355 546 aaPredicted RBP14.78□□□□□ -0.04
PVT1-209ENST00000520913 SYTL4Q96C24 671 aaPredicted RBP14.78□□□□□ -0.04
PVT1-209ENST00000520913 PPP1R1BQ9UD71 204 aaPredicted RBP14.77□□□□□ -0.05
PVT1-209ENST00000520913 PLEKHG2Q9H7P9 1386 aa14.76□□□□□ -0.05
PVT1-209ENST00000520913 SLC27A3Q5K4L6 730 aa14.76□□□□□ -0.05
PVT1-209ENST00000520913 PANK3Q9H999 370 aa14.76□□□□□ -0.05
PVT1-209ENST00000520913 PRIM1P49642 420 aaKnown RBP14.75□□□□□ -0.05
PVT1-209ENST00000520913 POLKQ9UBT6 870 aa14.75□□□□□ -0.05
PVT1-209ENST00000520913 PDGFDQ9GZP0 370 aaPredicted RBP14.74□□□□□ -0.05
PVT1-209ENST00000520913 LRRC4BQ9NT99 713 aa14.74□□□□□ -0.05
PVT1-209ENST00000520913 C4BP0C0L5 1744 aa14.74□□□□□ -0.05
PVT1-209ENST00000520913 UBR3Q6ZT12 1888 aa14.74□□□□□ -0.05
PVT1-209ENST00000520913 ZBTB7AO95365 584 aa14.73□□□□□ -0.05
PVT1-209ENST00000520913 TNNT2P45379 298 aaPredicted RBP14.73□□□□□ -0.05
PVT1-209ENST00000520913 ZNF827Q17R98 1081 aa14.73□□□□□ -0.05
PVT1-209ENST00000520913 KIF7Q2M1P5 1343 aa14.72□□□□□ -0.05
PVT1-209ENST00000520913 MTFR1LQ9H019 292 aa14.72□□□□□ -0.05
PVT1-209ENST00000520913 ZNF831Q5JPB2 1677 aa14.71□□□□□ -0.05
PVT1-209ENST00000520913 SCN11AQ9UI33 1791 aa14.71□□□□□ -0.05
PVT1-209ENST00000520913 CYP27B1O15528 508 aa14.71□□□□□ -0.05
PVT1-209ENST00000520913 EIF4A2Q14240 407 aaKnown RBP14.71□□□□□ -0.05
PVT1-209ENST00000520913 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
PVT1-209ENST00000520913 EYA1Q99502 592 aa14.71□□□□□ -0.05
PVT1-209ENST00000520913 SPG7Q9UQ90 795 aa14.71□□□□□ -0.05
PVT1-209ENST00000520913 KNSTRNQ9Y448 316 aa14.71□□□□□ -0.05
PVT1-209ENST00000520913 IGSF1Q8N6C5 1336 aa14.7□□□□□ -0.06
PVT1-209ENST00000520913 MORC1Q86VD1 984 aa14.7□□□□□ -0.06
PVT1-209ENST00000520913 AKT1S1Q96B36 256 aa14.7□□□□□ -0.06
PVT1-209ENST00000520913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.7□□□□□ -0.066e-7■■□□□ 13.7
PVT1-209ENST00000520913 CCNL1Q9UK58 526 aaPredicted RBP14.7□□□□□ -0.06
PVT1-209ENST00000520913 PALLDQ8WX93 1383 aa14.7□□□□□ -0.06
PVT1-209ENST00000520913 COL5A3P25940 1745 aaPredicted RBP14.69□□□□□ -0.06
PVT1-209ENST00000520913 CHD4Q14839 1912 aa14.69□□□□□ -0.06
PVT1-209ENST00000520913 PTGER2P43116 358 aa14.69□□□□□ -0.06
PVT1-209ENST00000520913 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
PVT1-209ENST00000520913 PNPLA7Q6ZV29 1317 aa14.67□□□□□ -0.06
PVT1-209ENST00000520913 NKX1-1Q15270 411 aaPredicted RBP14.67□□□□□ -0.06
PVT1-209ENST00000520913 CICQ96RK0 1608 aaPredicted RBP14.66□□□□□ -0.06
PVT1-209ENST00000520913 HMGB2P26583 209 aaKnown RBP14.66□□□□□ -0.06
PVT1-209ENST00000520913 KCNQ4P56696 695 aa14.66□□□□□ -0.06
PVT1-209ENST00000520913 MPRIPQ6WCQ1 1025 aa14.66□□□□□ -0.06
PVT1-209ENST00000520913 IFNL2Q8IZJ0 200 aa14.66□□□□□ -0.06
PVT1-209ENST00000520913 SLC16A10Q8TF71 515 aa14.66□□□□□ -0.06
PVT1-209ENST00000520913 SGIP1Q9BQI5 828 aa14.66□□□□□ -0.06
PVT1-209ENST00000520913 TFCP2L1Q9NZI6 479 aa14.66□□□□□ -0.06
PVT1-209ENST00000520913 PHKG2P15735 406 aa14.65□□□□□ -0.06
PVT1-209ENST00000520913 AMER1Q5JTC6 1135 aaPredicted RBP14.65□□□□□ -0.06
PVT1-209ENST00000520913 SMARCC1Q92922 1105 aaPredicted RBP14.65□□□□□ -0.06
PVT1-209ENST00000520913 MAP3K5Q99683 1374 aa14.64□□□□□ -0.07
PVT1-209ENST00000520913 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
PVT1-209ENST00000520913 KDRP35968 1356 aa14.63□□□□□ -0.07
PVT1-209ENST00000520913 TMOD3Q9NYL9 352 aa14.63□□□□□ -0.07
PVT1-209ENST00000520913 C4AP0C0L4 1744 aa14.63□□□□□ -0.07
PVT1-209ENST00000520913 ADAMTS7Q9UKP4 1686 aa14.62□□□□□ -0.07
PVT1-209ENST00000520913 KDM6AO15550 1401 aaPredicted RBP14.62□□□□□ -0.07
PVT1-209ENST00000520913 PIGBQ92521 554 aa14.62□□□□□ -0.07
PVT1-209ENST00000520913 ARXQ96QS3 562 aa14.62□□□□□ -0.07
PVT1-209ENST00000520913 FHDC1Q9C0D6 1143 aaPredicted RBP14.62□□□□□ -0.07
PVT1-209ENST00000520913 UTRNP46939 3433 aa14.62□□□□□ -0.07
PVT1-209ENST00000520913 NPC1L1Q9UHC9 1359 aa14.61□□□□□ -0.07
PVT1-209ENST00000520913 TJP1Q07157 1748 aa14.61□□□□□ -0.07
PVT1-209ENST00000520913 HSP90AB1P08238 724 aaKnown RBP14.61□□□□□ -0.07
PVT1-209ENST00000520913 POLD1P28340 1107 aa14.61□□□□□ -0.07
PVT1-209ENST00000520913 GOLGB1Q14789 3259 aaKnown RBP14.6□□□□□ -0.07
PVT1-209ENST00000520913 AMOTQ4VCS5 1084 aa14.6□□□□□ -0.07
PVT1-209ENST00000520913 PLEKHO1Q53GL0 409 aaPredicted RBP14.6□□□□□ -0.07
PVT1-209ENST00000520913 COL3A1P02461 1466 aaPredicted RBP14.6□□□□□ -0.07
PVT1-209ENST00000520913 PER1O15534 1290 aaPredicted RBP14.59□□□□□ -0.07
PVT1-209ENST00000520913 ZNF530Q6P9A1 599 aaPredicted RBP14.59□□□□□ -0.07
PVT1-209ENST00000520913 AEBP1Q8IUX7 1158 aa14.59□□□□□ -0.07
PVT1-209ENST00000520913 AK7Q96M32 723 aa14.59□□□□□ -0.07
PVT1-209ENST00000520913 SYT17Q9BSW7 474 aa14.59□□□□□ -0.07
PVT1-209ENST00000520913 MRC1P22897 1456 aa14.58□□□□□ -0.08
PVT1-209ENST00000520913 MSH5O43196 834 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms