RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 HOMEZQ8IX15 550 aa11.1□□□□□ -0.63
SHPRH-208ENST00000520752 CCDC82Q8N4S0 544 aa11.1□□□□□ -0.63
SHPRH-208ENST00000520752 EHBP1Q8NDI1 1231 aa11.1□□□□□ -0.63
SHPRH-208ENST00000520752 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
SHPRH-208ENST00000520752 FTSJ3Q8IY81 847 aaKnown RBP11.09□□□□□ -0.63
SHPRH-208ENST00000520752 MPNDQ8N594 471 aa11.09□□□□□ -0.63
SHPRH-208ENST00000520752 CCDC97Q96F63 343 aaPredicted RBP11.09□□□□□ -0.63
SHPRH-208ENST00000520752 CDV3Q9UKY7 258 aaKnown RBP11.09□□□□□ -0.63
SHPRH-208ENST00000520752 TEX2Q8IWB9 1127 aa11.08□□□□□ -0.64
SHPRH-208ENST00000520752 ANP32BQ92688 251 aaKnown RBP11.08□□□□□ -0.64
SHPRH-208ENST00000520752 CLIP1P30622 1438 aa11.08□□□□□ -0.64
SHPRH-208ENST00000520752 BAZ1BQ9UIG0 1483 aaKnown RBP11.07□□□□□ -0.64
SHPRH-208ENST00000520752 WDR97A6NE52 1622 aa11.07□□□□□ -0.64
SHPRH-208ENST00000520752 SIAH2O43255 324 aa11.07□□□□□ -0.64
SHPRH-208ENST00000520752 RGS20O76081 388 aa11.07□□□□□ -0.64
SHPRH-208ENST00000520752 KIF20AO95235 890 aa11.07□□□□□ -0.64
SHPRH-208ENST00000520752 ZNF697Q5TEC3 545 aa11.07□□□□□ -0.64
SHPRH-208ENST00000520752 SLC10A4Q96EP9 437 aa11.07□□□□□ -0.64
SHPRH-208ENST00000520752 MAP4K5Q9Y4K4 846 aa11.07□□□□□ -0.64
SHPRH-208ENST00000520752 KIF21BO75037 1637 aa11.06□□□□□ -0.64
SHPRH-208ENST00000520752 MAPKBP1O60336 1514 aa11.06□□□□□ -0.64
SHPRH-208ENST00000520752 PHTF2Q8N3S3 785 aa11.06□□□□□ -0.64
SHPRH-208ENST00000520752 NFATC2IPQ8NCF5 419 aa11.06□□□□□ -0.64
SHPRH-208ENST00000520752 CDK15Q96Q40 435 aa11.06□□□□□ -0.64
SHPRH-208ENST00000520752 UCN2Q96RP3 112 aa11.06□□□□□ -0.64
SHPRH-208ENST00000520752 BCCIPQ9P287 314 aaKnown RBP eCLIP11.06□□□□□ -0.64
SHPRH-208ENST00000520752 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
SHPRH-208ENST00000520752 MRGPRX2Q96LB1 330 aa11.05□□□□□ -0.64
SHPRH-208ENST00000520752 ESPNB1AK53 854 aa11.04□□□□□ -0.64
SHPRH-208ENST00000520752 DMTNQ08495 405 aa11.04□□□□□ -0.64
SHPRH-208ENST00000520752 NPM2Q86SE8 214 aaKnown RBP11.04□□□□□ -0.64
SHPRH-208ENST00000520752 GTPBP4Q9BZE4 634 aaKnown RBP11.04□□□□□ -0.64
SHPRH-208ENST00000520752 PPP1R12CQ9BZL4 782 aa11.04□□□□□ -0.64
SHPRH-208ENST00000520752 PKD2L1Q9P0L9 805 aa11.04□□□□□ -0.64
SHPRH-208ENST00000520752 GOLGA6L3A6NEY3 463 aa11.03□□□□□ -0.64
SHPRH-208ENST00000520752 CCDC125Q86Z20 511 aa11.03□□□□□ -0.64
SHPRH-208ENST00000520752 CHIC2Q9UKJ5 165 aa11.03□□□□□ -0.64
SHPRH-208ENST00000520752 NUDCQ9Y266 331 aa11.03□□□□□ -0.64
SHPRH-208ENST00000520752 FSD2A1L4K1 749 aa11.02□□□□□ -0.65
SHPRH-208ENST00000520752 GIGYF1O75420 1035 aaPredicted RBP11.02□□□□□ -0.65
SHPRH-208ENST00000520752 SLFNL1Q499Z3 407 aa11.02□□□□□ -0.65
SHPRH-208ENST00000520752 RNF20Q5VTR2 975 aa11.02□□□□□ -0.65
SHPRH-208ENST00000520752 SEPT12Q8IYM1 358 aa11.02□□□□□ -0.65
SHPRH-208ENST00000520752 TRIM44Q96DX7 344 aaPredicted RBP11.02□□□□□ -0.65
SHPRH-208ENST00000520752 PALM3A6NDB9 673 aaPredicted RBP11.01□□□□□ -0.65
SHPRH-208ENST00000520752 VASH1Q7L8A9 365 aaPredicted RBP11.01□□□□□ -0.65
SHPRH-208ENST00000520752 KCTD15Q96SI1 283 aaPredicted RBP11.01□□□□□ -0.65
SHPRH-208ENST00000520752 TFIP11Q9UBB9 837 aaKnown RBP11.01□□□□□ -0.65
SHPRH-208ENST00000520752 PIK3CDO00329 1044 aa11□□□□□ -0.65
SHPRH-208ENST00000520752 ATP9BO43861 1147 aa11□□□□□ -0.65
SHPRH-208ENST00000520752 GDF9O60383 454 aa11□□□□□ -0.65
SHPRH-208ENST00000520752 LETM1O95202 739 aaPredicted RBP11□□□□□ -0.65
SHPRH-208ENST00000520752 MRE11P49959 708 aa11□□□□□ -0.65
SHPRH-208ENST00000520752 TBC1D9Q6ZT07 1266 aa11□□□□□ -0.65
SHPRH-208ENST00000520752 ARID3AQ99856 593 aa11□□□□□ -0.65
SHPRH-208ENST00000520752 CHMP4BQ9H444 224 aaKnown RBP11□□□□□ -0.65
SHPRH-208ENST00000520752 FHAD1B1AJZ9 1412 aa11□□□□□ -0.65
SHPRH-208ENST00000520752 GRM5P41594 1212 aa10.99□□□□□ -0.65
SHPRH-208ENST00000520752 FOXC1Q12948 553 aa10.99□□□□□ -0.65
SHPRH-208ENST00000520752 CFAP70Q5T0N1 1121 aa10.99□□□□□ -0.65
SHPRH-208ENST00000520752 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.99□□□□□ -0.65
SHPRH-208ENST00000520752 RNF135Q8IUD6 432 aa10.99□□□□□ -0.65
SHPRH-208ENST00000520752 FRAT2O75474 233 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-208ENST00000520752 ARID5BQ14865 1188 aa10.98□□□□□ -0.65
SHPRH-208ENST00000520752 MAP7D1Q3KQU3 841 aa10.98□□□□□ -0.65
SHPRH-208ENST00000520752 TLL2Q9Y6L7 1015 aa10.98□□□□□ -0.65
SHPRH-208ENST00000520752 LZTS3O60299 673 aaPredicted RBP10.97□□□□□ -0.65
SHPRH-208ENST00000520752 ADH1CP00326 375 aa10.97□□□□□ -0.65
SHPRH-208ENST00000520752 PRR20EP86478 221 aa10.97□□□□□ -0.65
SHPRH-208ENST00000520752 PRR20CP86479 221 aa10.97□□□□□ -0.65
SHPRH-208ENST00000520752 PRR20DP86480 221 aa10.97□□□□□ -0.65
SHPRH-208ENST00000520752 PRR20BP86481 221 aa10.97□□□□□ -0.65
SHPRH-208ENST00000520752 PRR20AP86496 221 aa10.97□□□□□ -0.65
SHPRH-208ENST00000520752 SNIP1Q8TAD8 396 aaKnown RBP10.97□□□□□ -0.65
SHPRH-208ENST00000520752 MAFBQ9Y5Q3 323 aaPredicted RBP10.97□□□□□ -0.65
SHPRH-208ENST00000520752 NCOA2Q15596 1464 aa10.97□□□□□ -0.65
SHPRH-208ENST00000520752 PHLDB1Q86UU1 1377 aa10.96□□□□□ -0.65
SHPRH-208ENST00000520752 OFD1O75665 1012 aa10.96□□□□□ -0.65
SHPRH-208ENST00000520752 SKIP12755 728 aa10.96□□□□□ -0.65
SHPRH-208ENST00000520752 NR5A1Q13285 461 aa10.96□□□□□ -0.65
SHPRH-208ENST00000520752 TRIM67Q6ZTA4 783 aa10.96□□□□□ -0.65
SHPRH-208ENST00000520752 PLEKHM2Q8IWE5 1019 aa10.96□□□□□ -0.65
SHPRH-208ENST00000520752 TMEM51Q9NW97 253 aa10.96□□□□□ -0.65
SHPRH-208ENST00000520752 XRCC6P12956 609 aaKnown RBP eCLIP10.95□□□□□ -0.66
SHPRH-208ENST00000520752 SLC20A2Q08357 652 aa10.95□□□□□ -0.66
SHPRH-208ENST00000520752 INTS6LQ5JSJ4 861 aaKnown RBP10.95□□□□□ -0.66
SHPRH-208ENST00000520752 TRAF7Q6Q0C0 670 aa10.95□□□□□ -0.66
SHPRH-208ENST00000520752 PLPP7Q8NBV4 271 aa10.95□□□□□ -0.66
SHPRH-208ENST00000520752 CCDC85AQ96PX6 553 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-208ENST00000520752 USP17L5A8MUK1 530 aa10.94□□□□□ -0.66
SHPRH-208ENST00000520752 LMOD1P29536 600 aaPredicted RBP10.94□□□□□ -0.66
SHPRH-208ENST00000520752 SRPK2P78362 688 aaKnown RBP10.94□□□□□ -0.66
SHPRH-208ENST00000520752 TSGA10IPQ3SY00 556 aa10.94□□□□□ -0.66
SHPRH-208ENST00000520752 MYH16Q9H6N6 1097 aa10.94□□□□□ -0.66
SHPRH-208ENST00000520752 TOR4AQ9NXH8 423 aa10.94□□□□□ -0.66
SHPRH-208ENST00000520752 CCNB3Q8WWL7 1395 aa10.93□□□□□ -0.66
SHPRH-208ENST00000520752 DYNC1I1O14576 645 aa10.93□□□□□ -0.66
SHPRH-208ENST00000520752 ALDH1A1P00352 501 aa10.93□□□□□ -0.66
SHPRH-208ENST00000520752 CYP4X1Q8N118 509 aa10.93□□□□□ -0.66
SHPRH-208ENST00000520752 SETD5Q9C0A6 1442 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms