RNA–Protein interactions for RNA: ENST00000520600.1

CHRNA2-205, Transcript of cholinergic receptor nicotinic alpha 2 subunit, humanhuman

TSL 1 (best)

Gene CHRNA2, Length 1,468 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2-205ENST00000520600 SHANK3Q9BYB0 1731 aa19.52■□□□□ 0.72
CHRNA2-205ENST00000520600 PPM1GO15355 546 aaPredicted RBP19.51■□□□□ 0.71
CHRNA2-205ENST00000520600 PANK3Q9H999 370 aa19.51■□□□□ 0.71
CHRNA2-205ENST00000520600 PROM2Q8N271 834 aa19.5■□□□□ 0.71
CHRNA2-205ENST00000520600 ZCRB1Q8TBF4 217 aaKnown RBP19.5■□□□□ 0.71
CHRNA2-205ENST00000520600 TXNRD1Q16881 649 aa19.49■□□□□ 0.71
CHRNA2-205ENST00000520600 RAPGEF4Q8WZA2 1011 aa19.49■□□□□ 0.71
CHRNA2-205ENST00000520600 ANO8Q9HCE9 1232 aaPredicted RBP19.48■□□□□ 0.71
CHRNA2-205ENST00000520600 DOT1LQ8TEK3 1739 aa19.48■□□□□ 0.71
CHRNA2-205ENST00000520600 TATP17735 454 aaPredicted RBP19.47■□□□□ 0.71
CHRNA2-205ENST00000520600 TNNT2P45379 298 aaPredicted RBP19.47■□□□□ 0.71
CHRNA2-205ENST00000520600 WASHC2AQ641Q2 1341 aa19.46■□□□□ 0.71
CHRNA2-205ENST00000520600 POLKQ9UBT6 870 aa19.45■□□□□ 0.7
CHRNA2-205ENST00000520600 NSD2O96028 1365 aa19.45■□□□□ 0.7
CHRNA2-205ENST00000520600 SYTL4Q96C24 671 aaPredicted RBP19.44■□□□□ 0.7
CHRNA2-205ENST00000520600 STK32BQ9NY57 414 aa19.43■□□□□ 0.7
CHRNA2-205ENST00000520600 PRIM1P49642 420 aaKnown RBP19.42■□□□□ 0.7
CHRNA2-205ENST00000520600 KIF7Q2M1P5 1343 aa19.42■□□□□ 0.7
CHRNA2-205ENST00000520600 PCDH11XQ9BZA7 1347 aa19.42■□□□□ 0.7
CHRNA2-205ENST00000520600 PCDH11YQ9BZA8 1340 aa19.42■□□□□ 0.7
CHRNA2-205ENST00000520600 CASZ1Q86V15 1759 aa19.42■□□□□ 0.7
CHRNA2-205ENST00000520600 KNSTRNQ9Y448 316 aa19.41■□□□□ 0.7
CHRNA2-205ENST00000520600 NCAPD2Q15021 1401 aa19.41■□□□□ 0.7
CHRNA2-205ENST00000520600 SPON1Q9HCB6 807 aa19.41■□□□□ 0.7
CHRNA2-205ENST00000520600 PAPPAQ13219 1627 aa19.4■□□□□ 0.7
CHRNA2-205ENST00000520600 PKD1L3Q7Z443 1732 aa19.4■□□□□ 0.7
CHRNA2-205ENST00000520600 SLC15A2Q16348 729 aa19.4■□□□□ 0.7
CHRNA2-205ENST00000520600 EYA1Q99502 592 aa19.4■□□□□ 0.7
CHRNA2-205ENST00000520600 MORC1Q86VD1 984 aa19.39■□□□□ 0.69
CHRNA2-205ENST00000520600 EIF4A2Q14240 407 aaKnown RBP19.37■□□□□ 0.69
CHRNA2-205ENST00000520600 PDGFDQ9GZP0 370 aaPredicted RBP19.37■□□□□ 0.69
CHRNA2-205ENST00000520600 LRRC4BQ9NT99 713 aa19.37■□□□□ 0.69
CHRNA2-205ENST00000520600 LY75O60449 1722 aa19.37■□□□□ 0.69
CHRNA2-205ENST00000520600 SLC27A3Q5K4L6 730 aa19.36■□□□□ 0.69
CHRNA2-205ENST00000520600 CYP27B1O15528 508 aa19.35■□□□□ 0.69
CHRNA2-205ENST00000520600 PPP1R1BQ9UD71 204 aaPredicted RBP19.35■□□□□ 0.69
CHRNA2-205ENST00000520600 SPG7Q9UQ90 795 aa19.35■□□□□ 0.69
CHRNA2-205ENST00000520600 TOGARAM1Q9Y4F4 1720 aa19.34■□□□□ 0.69
CHRNA2-205ENST00000520600 ZBTB7AO95365 584 aa19.34■□□□□ 0.69
CHRNA2-205ENST00000520600 ITGB4P16144 1822 aa19.33■□□□□ 0.69
CHRNA2-205ENST00000520600 ZNF827Q17R98 1081 aa19.33■□□□□ 0.68
CHRNA2-205ENST00000520600 AMER1Q5JTC6 1135 aaPredicted RBP19.33■□□□□ 0.68
CHRNA2-205ENST00000520600 KCNQ4P56696 695 aa19.32■□□□□ 0.68
CHRNA2-205ENST00000520600 IGSF1Q8N6C5 1336 aa19.31■□□□□ 0.68
CHRNA2-205ENST00000520600 DIEXFQ68CQ4 756 aaKnown RBP19.31■□□□□ 0.68
CHRNA2-205ENST00000520600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.31■□□□□ 0.68
CHRNA2-205ENST00000520600 MPRIPQ6WCQ1 1025 aa19.3■□□□□ 0.68
CHRNA2-205ENST00000520600 AKT1S1Q96B36 256 aa19.3■□□□□ 0.68
CHRNA2-205ENST00000520600 CCNL1Q9UK58 526 aaPredicted RBP19.3■□□□□ 0.68
CHRNA2-205ENST00000520600 QSER1Q2KHR3 1735 aa19.3■□□□□ 0.68
CHRNA2-205ENST00000520600 TUBGCP6Q96RT7 1819 aa19.29■□□□□ 0.68
CHRNA2-205ENST00000520600 ATF5Q9Y2D1 282 aaPredicted RBP19.29■□□□□ 0.68
CHRNA2-205ENST00000520600 PLEKHG2Q9H7P9 1386 aa19.29■□□□□ 0.68
CHRNA2-205ENST00000520600 NKX1-1Q15270 411 aaPredicted RBP19.28■□□□□ 0.68
CHRNA2-205ENST00000520600 MTFR1LQ9H019 292 aa19.28■□□□□ 0.68
CHRNA2-205ENST00000520600 IFNL2Q8IZJ0 200 aa19.28■□□□□ 0.68
CHRNA2-205ENST00000520600 PALLDQ8WX93 1383 aa19.27■□□□□ 0.68
CHRNA2-205ENST00000520600 PER1O15534 1290 aaPredicted RBP19.27■□□□□ 0.67
CHRNA2-205ENST00000520600 PHKG2P15735 406 aa19.27■□□□□ 0.67
CHRNA2-205ENST00000520600 PTGER2P43116 358 aa19.27■□□□□ 0.67
CHRNA2-205ENST00000520600 C5P01031 1676 aa19.26■□□□□ 0.67
CHRNA2-205ENST00000520600 CC2D1BQ5T0F9 858 aaKnown RBP19.26■□□□□ 0.67
CHRNA2-205ENST00000520600 TFCP2L1Q9NZI6 479 aa19.26■□□□□ 0.67
CHRNA2-205ENST00000520600 PIGBQ92521 554 aa19.25■□□□□ 0.67
CHRNA2-205ENST00000520600 PNPLA7Q6ZV29 1317 aa19.25■□□□□ 0.67
CHRNA2-205ENST00000520600 SMARCC1Q92922 1105 aaPredicted RBP19.24■□□□□ 0.67
CHRNA2-205ENST00000520600 TAF1LQ8IZX4 1826 aa19.24■□□□□ 0.67
CHRNA2-205ENST00000520600 AEBP1Q8IUX7 1158 aa19.23■□□□□ 0.67
CHRNA2-205ENST00000520600 TMOD3Q9NYL9 352 aa19.23■□□□□ 0.67
CHRNA2-205ENST00000520600 IL13P35225 146 aa19.22■□□□□ 0.67
CHRNA2-205ENST00000520600 MTHFSP49914 203 aa19.22■□□□□ 0.67
CHRNA2-205ENST00000520600 PLEKHO1Q53GL0 409 aaPredicted RBP19.22■□□□□ 0.67
CHRNA2-205ENST00000520600 SULT6B1Q6IMI4 303 aa19.22■□□□□ 0.67
CHRNA2-205ENST00000520600 HMGB2P26583 209 aaKnown RBP19.21■□□□□ 0.67
CHRNA2-205ENST00000520600 CNGB1Q14028 1251 aaPredicted RBP19.21■□□□□ 0.67
CHRNA2-205ENST00000520600 AMOTQ4VCS5 1084 aa19.21■□□□□ 0.67
CHRNA2-205ENST00000520600 ZNF530Q6P9A1 599 aaPredicted RBP19.21■□□□□ 0.67
CHRNA2-205ENST00000520600 SLC16A10Q8TF71 515 aa19.21■□□□□ 0.67
CHRNA2-205ENST00000520600 SGIP1Q9BQI5 828 aa19.21■□□□□ 0.67
CHRNA2-205ENST00000520600 NPC1L1Q9UHC9 1359 aa19.2■□□□□ 0.66
CHRNA2-205ENST00000520600 KDRP35968 1356 aa19.2■□□□□ 0.66
CHRNA2-205ENST00000520600 HSP90AB1P08238 724 aaKnown RBP19.19■□□□□ 0.66
CHRNA2-205ENST00000520600 DCAF5Q96JK2 942 aa19.18■□□□□ 0.66
CHRNA2-205ENST00000520600 C4BP0C0L5 1744 aa19.18■□□□□ 0.66
CHRNA2-205ENST00000520600 COL24A1Q17RW2 1714 aa19.17■□□□□ 0.66
CHRNA2-205ENST00000520600 MSH5O43196 834 aa19.17■□□□□ 0.66
CHRNA2-205ENST00000520600 DDX10Q13206 875 aaKnown RBP19.17■□□□□ 0.66
CHRNA2-205ENST00000520600 C1orf141Q5JVX7 400 aa19.17■□□□□ 0.66
CHRNA2-205ENST00000520600 ARXQ96QS3 562 aa19.17■□□□□ 0.66
CHRNA2-205ENST00000520600 FHDC1Q9C0D6 1143 aaPredicted RBP19.17■□□□□ 0.66
CHRNA2-205ENST00000520600 ASAP1Q9ULH1 1129 aa19.17■□□□□ 0.66
CHRNA2-205ENST00000520600 LOC102724428A0A0B4J2F2 783 aa19.16■□□□□ 0.66
CHRNA2-205ENST00000520600 ERVV-2B6SEH9 535 aa19.16■□□□□ 0.66
CHRNA2-205ENST00000520600 SIK1P57059 783 aa19.16■□□□□ 0.66
CHRNA2-205ENST00000520600 KDM6AO15550 1401 aaPredicted RBP19.16■□□□□ 0.66
CHRNA2-205ENST00000520600 DCAF8L1A6NGE4 600 aa19.16■□□□□ 0.66
CHRNA2-205ENST00000520600 POLD1P28340 1107 aa19.16■□□□□ 0.66
CHRNA2-205ENST00000520600 COL23A1Q86Y22 540 aaPredicted RBP19.16■□□□□ 0.66
CHRNA2-205ENST00000520600 DIAPH1O60610 1272 aaKnown RBP19.15■□□□□ 0.66
CHRNA2-205ENST00000520600 AK7Q96M32 723 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms